RNA–Protein interactions for RNA: ENSMUST00000036690.6

Ptchd3-201, Transcript of Patched domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptchd3, Length 3,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3-201ENSMUST00000036690 Zbtb7aO88939 569 aaKnown RBP13.76□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Fam53cQ8BXQ8 393 aa13.76□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Riok1Q922Q2 567 aa13.76□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Trim59Q922Y2 403 aa13.76□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 IcoslgQ9JHJ8 322 aa13.76□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Clic4Q9QYB1 253 aa13.76□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 LyarQ08288 388 aaKnown RBP13.75□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Mns1Q61884 491 aa13.75□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Phf20l1Q8CCJ9 1013 aa13.75□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Dbndd1Q9CZ00 160 aa13.75□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Fbxl16A2RT62 479 aa13.75□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 H2afxP27661 143 aaKnown RBP13.75□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Nbr1P97432 988 aa13.75□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Slc38a10Q5I012 1090 aa13.75□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 DymQ8CHY3 669 aa13.75□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Terf2ipQ91VL8 393 aa13.75□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Ppp4r3bQ922R5 820 aa13.75□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Stxbp4Q9WV89 557 aa13.75□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Map7d2A2AG50 781 aa13.75□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Prl3d1P18121 224 aa13.75□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Srp68Q8BMA6 625 aaKnown RBP13.75□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Tmx1Q8VBT0 278 aa13.75□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Mei1Q9D4I2 1268 aa13.75□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Naa16Q9DBB4 864 aa13.75□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Tcof1O08784 1320 aaKnown RBP13.75□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Myh1Q5SX40 1942 aa13.74□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Pcdhb9E9Q5G2 828 aa13.74□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Tnni2P13412 182 aa13.74□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Mcm6P97311 821 aa13.74□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Anp32eP97822 260 aaKnown RBP13.74□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Uri1Q3TLD5 531 aa13.74□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Mkrn3Q60764 544 aa13.74□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Ehd2Q8BH64 543 aa13.74□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Actn3O88990 900 aaKnown RBP13.74□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Me1P06801 572 aa13.74□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Plbd2Q3TCN2 594 aa13.74□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Znf496Q5SXI5 585 aa13.74□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Trak2Q6P9N8 913 aa13.74□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 U2af1l4Q8BGJ9 220 aa13.74□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Wdr3Q8BHB4 942 aaKnown RBP13.74□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 ImmtQ8CAQ8 757 aaKnown RBP13.74□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Atad2Q8CDM1 1040 aa13.74□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Lrrc2Q8VDB8 371 aa13.74□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Ktn1Q61595 1327 aaKnown RBP13.74□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Gm13023A2A8N2 498 aa13.73□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Vmn2r23E9PXI5 849 aa13.73□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Atp1b3P97370 278 aa13.73□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Kcnd1Q03719 651 aa13.73□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 SdsQ8VBT2 327 aa13.73□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Ccdc121E9Q6D3 323 aa13.73□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 NapbP28663 298 aa13.73□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Exosc10P56960 887 aaKnown RBP13.73□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Rtel1Q0VGM9 1203 aa13.73□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Tshz1Q5DTH5 1084 aa13.73□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Srek1Q8BZX4 494 aaKnown RBP13.73□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Shisa4Q8CA71 197 aa13.73□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 CerkQ8K4Q7 531 aa13.73□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Nop2Q922K7 793 aaKnown RBP13.73□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Magi2Q9WVQ1 1275 aa13.73□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Lipo1J3QME6 396 aa13.73□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Capn2O08529 700 aa13.73□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Sptlc2P97363 560 aaKnown RBP13.73□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Pcdhgc5Q91XW9 944 aa13.73□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Mroh6V9GX81 722 aa13.73□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Krt24A1L317 512 aa13.72□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 1700029H14RikE9PY36 240 aa13.72□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Cdc37Q61081 379 aa13.72□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Etf1Q8BWY3 437 aaKnown RBP13.72□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Slc39a11Q8BWY7 342 aa13.72□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Zfp202Q8C879 641 aa13.72□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Zbtb43Q9DAI4 467 aa13.72□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Dnajc25A2ALW5 357 aa13.72□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Alg3Q8K2A8 438 aa13.72□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Fam76aQ922G2 307 aa13.72□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Abcb6Q9DC29 842 aa13.72□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Ube3bQ9ES34 1070 aa13.72□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Kcnq5Q9JK45 933 aa13.72□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 AW822073A0A0N4SUK1 652 aa13.71□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Slc1a4O35874 532 aa13.71□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Trim25Q61510 634 aaKnown RBP13.71□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Ncaph2Q8BSP2 607 aa13.71□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Ces1dQ8VCT4 565 aa13.71□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 ChmQ9QXG2 665 aa13.71□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Shank3Q4ACU6 1730 aa13.71□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Pet2A2AHY8 747 aa13.71□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Gm4340L7N2C4 268 aa13.71□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 SfswapQ3USH5 945 aaKnown RBP13.71□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Prdm4Q80V63 803 aa13.71□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Rbm5Q91YE7 815 aaKnown RBP13.71□□□□□ -0.21
Ptchd3-201ENSMUST00000036690 Setdb1O88974 1307 aa13.71□□□□□ -0.22
Ptchd3-201ENSMUST00000036690 Grin2dQ03391 1323 aa13.71□□□□□ -0.22
Ptchd3-201ENSMUST00000036690 GmnnO88513 206 aa13.71□□□□□ -0.22
Ptchd3-201ENSMUST00000036690 Fkbp1aP26883 108 aaKnown RBP13.71□□□□□ -0.22
Ptchd3-201ENSMUST00000036690 Gimap8Q75N62 688 aa13.71□□□□□ -0.22
Ptchd3-201ENSMUST00000036690 Rec8Q8C5S7 591 aa13.71□□□□□ -0.22
Ptchd3-201ENSMUST00000036690 Ppil4Q9CXG3 492 aaKnown RBP13.71□□□□□ -0.22
Ptchd3-201ENSMUST00000036690 Pde3aQ9Z0X4 1141 aa13.71□□□□□ -0.22
Ptchd3-201ENSMUST00000036690 GakQ99KY4 1305 aa13.7□□□□□ -0.22
Ptchd3-201ENSMUST00000036690 Slc4a4O88343 1079 aa13.7□□□□□ -0.22
Ptchd3-201ENSMUST00000036690 LtkP08923 888 aa13.7□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 181.6 ms