RNA–Protein interactions for RNA: ENSMUST00000033407.12

Cttn-201, Transcript of Src substrate cortactin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cttn, Length 2,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cttn-201ENSMUST00000033407 Gm42688A0A0R3P9D1 673 aa13.06□□□□□ -0.32
Cttn-201ENSMUST00000033407 Dctn1O08788 1281 aa13.06□□□□□ -0.32
Cttn-201ENSMUST00000033407 Psmd1Q3TXS7 953 aa13.06□□□□□ -0.32
Cttn-201ENSMUST00000033407 Fam228bQ497Q6 232 aa13.06□□□□□ -0.32
Cttn-201ENSMUST00000033407 Mkrn3Q60764 544 aa13.06□□□□□ -0.32
Cttn-201ENSMUST00000033407 Gpr101Q80T62 511 aa13.06□□□□□ -0.32
Cttn-201ENSMUST00000033407 Ccdc142Q8CAI1 738 aa13.06□□□□□ -0.32
Cttn-201ENSMUST00000033407 Rbm17Q8JZX4 405 aaKnown RBP13.06□□□□□ -0.32
Cttn-201ENSMUST00000033407 Tbc1d4Q8BYJ6 1307 aa13.05□□□□□ -0.32
Cttn-201ENSMUST00000033407 Calcoco2A2A6M5 331 aa13.05□□□□□ -0.32
Cttn-201ENSMUST00000033407 MecomP14404 1042 aa13.05□□□□□ -0.32
Cttn-201ENSMUST00000033407 Chpf2Q3UU43 768 aa13.05□□□□□ -0.32
Cttn-201ENSMUST00000033407 Trak2Q6P9N8 913 aa13.05□□□□□ -0.32
Cttn-201ENSMUST00000033407 Tceanc2Q8R2M0 207 aa13.05□□□□□ -0.32
Cttn-201ENSMUST00000033407 Trim34aQ99PP6 485 aa13.05□□□□□ -0.32
Cttn-201ENSMUST00000033407 Cyp2ab1S4R196 498 aa13.05□□□□□ -0.32
Cttn-201ENSMUST00000033407 Scn11aQ9R053 1765 aa13.05□□□□□ -0.32
Cttn-201ENSMUST00000033407 Ktn1Q61595 1327 aaKnown RBP13.05□□□□□ -0.32
Cttn-201ENSMUST00000033407 Sipa1l3G3X9J0 1776 aa13.05□□□□□ -0.32
Cttn-201ENSMUST00000033407 Kif3cO35066 796 aa13.05□□□□□ -0.32
Cttn-201ENSMUST00000033407 L1td1Q587J6 782 aaKnown RBP13.05□□□□□ -0.32
Cttn-201ENSMUST00000033407 Dhx40Q6PE54 779 aaKnown RBP13.05□□□□□ -0.32
Cttn-201ENSMUST00000033407 Sp8Q8BMJ8 486 aa13.05□□□□□ -0.32
Cttn-201ENSMUST00000033407 Tmem87aQ8BXN9 555 aa13.05□□□□□ -0.32
Cttn-201ENSMUST00000033407 Iffo2Q8R2V2 512 aa13.05□□□□□ -0.32
Cttn-201ENSMUST00000033407 Tnip1Q9WUU8 647 aa13.05□□□□□ -0.32
Cttn-201ENSMUST00000033407 Golgb1E9PVZ8 3238 aa13.04□□□□□ -0.32
Cttn-201ENSMUST00000033407 Col1a2Q01149 1372 aa13.04□□□□□ -0.32
Cttn-201ENSMUST00000033407 Tlr7P58681 1050 aa13.04□□□□□ -0.32
Cttn-201ENSMUST00000033407 Usp28Q5I043 1051 aa13.04□□□□□ -0.32
Cttn-201ENSMUST00000033407 Foxn1Q61575 648 aa13.04□□□□□ -0.32
Cttn-201ENSMUST00000033407 Tpm4Q6IRU2 248 aa13.04□□□□□ -0.32
Cttn-201ENSMUST00000033407 Q8BZJ8 459 aa13.04□□□□□ -0.32
Cttn-201ENSMUST00000033407 Lcmt1A0A0U1RNF2 332 aa13.04□□□□□ -0.32
Cttn-201ENSMUST00000033407 Ccdc112A0AUP1 442 aa13.04□□□□□ -0.32
Cttn-201ENSMUST00000033407 TrdnE9Q9K5 693 aa13.04□□□□□ -0.32
Cttn-201ENSMUST00000033407 Stat1P42225 749 aa13.04□□□□□ -0.32
Cttn-201ENSMUST00000033407 Samsn1P57725 372 aa13.04□□□□□ -0.32
Cttn-201ENSMUST00000033407 Zfp317Q8C0Q5 607 aa13.04□□□□□ -0.32
Cttn-201ENSMUST00000033407 Slc39a6Q8C145 765 aa13.04□□□□□ -0.32
Cttn-201ENSMUST00000033407 Foxo3Q9WVH4 672 aa13.04□□□□□ -0.32
Cttn-201ENSMUST00000033407 Col1a1P11087 1453 aa13.04□□□□□ -0.32
Cttn-201ENSMUST00000033407 Dhx8A2A4P0 1244 aaKnown RBP13.03□□□□□ -0.32
Cttn-201ENSMUST00000033407 Tom1l2Q5SRX1 507 aa13.03□□□□□ -0.32
Cttn-201ENSMUST00000033407 Znf532Q6NXK2 1036 aa13.03□□□□□ -0.32
Cttn-201ENSMUST00000033407 Frat2Q8K025 231 aa13.03□□□□□ -0.32
Cttn-201ENSMUST00000033407 Pcdhb15Q91Y04 786 aa13.03□□□□□ -0.32
Cttn-201ENSMUST00000033407 Taf7Q9R1C0 341 aa13.03□□□□□ -0.32
Cttn-201ENSMUST00000033407 Ly6iQ9WU67 134 aa13.03□□□□□ -0.32
Cttn-201ENSMUST00000033407 Rgs12Q8CGE9 1381 aa13.03□□□□□ -0.32
Cttn-201ENSMUST00000033407 Cnksr1A2A9K7 700 aa13.03□□□□□ -0.32
Cttn-201ENSMUST00000033407 Fkbp1aP26883 108 aaKnown RBP13.03□□□□□ -0.32
Cttn-201ENSMUST00000033407 Rtel1Q0VGM9 1203 aa13.03□□□□□ -0.32
Cttn-201ENSMUST00000033407 Psd3Q2PFD7 1037 aa13.03□□□□□ -0.32
Cttn-201ENSMUST00000033407 Slc20a2Q80UP8 656 aa13.03□□□□□ -0.32
Cttn-201ENSMUST00000033407 Gpatch3Q8BIY1 525 aa13.03□□□□□ -0.32
Cttn-201ENSMUST00000033407 Trim52Q8CDV4 233 aa13.03□□□□□ -0.32
Cttn-201ENSMUST00000033407 Ccdc96Q9CR92 584 aa13.03□□□□□ -0.32
Cttn-201ENSMUST00000033407 Hmg20bQ9Z104 317 aa13.03□□□□□ -0.32
Cttn-201ENSMUST00000033407 NynrinQ5DTZ0 1840 aa13.02□□□□□ -0.32
Cttn-201ENSMUST00000033407 Arhgap4B1AUY3 965 aa13.02□□□□□ -0.32
Cttn-201ENSMUST00000033407 Ugt1a5B2RT14 529 aa13.02□□□□□ -0.32
Cttn-201ENSMUST00000033407 Cyp2d11P24457 504 aa13.02□□□□□ -0.32
Cttn-201ENSMUST00000033407 CoilQ5SU73 570 aa13.02□□□□□ -0.32
Cttn-201ENSMUST00000033407 Gnl3lQ6PGG6 577 aaKnown RBP13.02□□□□□ -0.32
Cttn-201ENSMUST00000033407 EcsitQ9QZH6 435 aa13.02□□□□□ -0.32
Cttn-201ENSMUST00000033407 Abcc4E9Q236 1325 aa13.02□□□□□ -0.32
Cttn-201ENSMUST00000033407 Tnnt1O88346 262 aa13.02□□□□□ -0.33
Cttn-201ENSMUST00000033407 Lrriq3Q14DL3 633 aa13.02□□□□□ -0.33
Cttn-201ENSMUST00000033407 Ccdc102aQ3TMW1 549 aa13.02□□□□□ -0.33
Cttn-201ENSMUST00000033407 Ctdnep1Q3TP92 244 aa13.02□□□□□ -0.33
Cttn-201ENSMUST00000033407 Ccdc93Q7TQK5 629 aa13.02□□□□□ -0.33
Cttn-201ENSMUST00000033407 Ppp1r10Q80W00 888 aaKnown RBP13.02□□□□□ -0.33
Cttn-201ENSMUST00000033407 Rassf4Q8CB96 322 aa13.02□□□□□ -0.33
Cttn-201ENSMUST00000033407 CrebrfQ8CDG5 640 aaKnown RBP13.02□□□□□ -0.33
Cttn-201ENSMUST00000033407 Fzd9Q9R216 592 aa13.02□□□□□ -0.33
Cttn-201ENSMUST00000033407 Zap70P43404 618 aa13.02□□□□□ -0.33
Cttn-201ENSMUST00000033407 Eif4a1P60843 406 aaKnown RBP13.02□□□□□ -0.33
Cttn-201ENSMUST00000033407 Rai14Q9EP71 979 aaKnown RBP13.02□□□□□ -0.33
Cttn-201ENSMUST00000033407 Atp2b1G5E829 1220 aa13.01□□□□□ -0.33
Cttn-201ENSMUST00000033407 Cfdp1O88271 295 aaKnown RBP13.01□□□□□ -0.33
Cttn-201ENSMUST00000033407 Bend3Q6PAL0 825 aa13.01□□□□□ -0.33
Cttn-201ENSMUST00000033407 Cyp2d12Q8BVD2 504 aa13.01□□□□□ -0.33
Cttn-201ENSMUST00000033407 Zranb2Q9R020 330 aaKnown RBP13.01□□□□□ -0.33
Cttn-201ENSMUST00000033407 Sh3tc1G3X9F6 1346 aa13.01□□□□□ -0.33
Cttn-201ENSMUST00000033407 GckrQ91X44 587 aa13.01□□□□□ -0.33
Cttn-201ENSMUST00000033407 Golga5Q9QYE6 729 aa13.01□□□□□ -0.33
Cttn-201ENSMUST00000033407 NinQ61043 2035 aa13□□□□□ -0.33
Cttn-201ENSMUST00000033407 Susd4Q8BH32 490 aa13□□□□□ -0.33
Cttn-201ENSMUST00000033407 Dnm3Q8BZ98 863 aa13□□□□□ -0.33
Cttn-201ENSMUST00000033407 Ddx27Q921N6 760 aaKnown RBP13□□□□□ -0.33
Cttn-201ENSMUST00000033407 Dusp10Q9ESS0 483 aa13□□□□□ -0.33
Cttn-201ENSMUST00000033407 Uri1Q3TLD5 531 aa13□□□□□ -0.33
Cttn-201ENSMUST00000033407 ChmQ9QXG2 665 aa13□□□□□ -0.33
Cttn-201ENSMUST00000033407 AW822073A0A0N4SUK1 652 aa12.99□□□□□ -0.33
Cttn-201ENSMUST00000033407 Limch1Q3UH68 1057 aa12.99□□□□□ -0.33
Cttn-201ENSMUST00000033407 Glg1Q61543 1175 aaKnown RBP12.99□□□□□ -0.33
Cttn-201ENSMUST00000033407 Golph3lQ8R088 285 aaKnown RBP12.99□□□□□ -0.33
Cttn-201ENSMUST00000033407 Fam76aQ922G2 307 aa12.99□□□□□ -0.33
Cttn-201ENSMUST00000033407 Igf2bp3Q9CPN8 579 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 15.4 ms