RNA–Protein interactions for RNA: ENSMUST00000032962.10

Cln3-201, Transcript of Battenin, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Cln3, Length 2,386 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3-201ENSMUST00000032962 IbspQ61711 324 aa13.77□□□□□ -0.21
Cln3-201ENSMUST00000032962 Tut1Q8R3F9 869 aa13.77□□□□□ -0.21
Cln3-201ENSMUST00000032962 Txnrd3Q99MD6 652 aa13.77□□□□□ -0.21
Cln3-201ENSMUST00000032962 Smc3Q9CW03 1217 aaKnown RBP13.77□□□□□ -0.21
Cln3-201ENSMUST00000032962 MthfsQ9D110 203 aa13.77□□□□□ -0.21
Cln3-201ENSMUST00000032962 Pik3ap1Q9EQ32 811 aa13.77□□□□□ -0.21
Cln3-201ENSMUST00000032962 FliiQ9JJ28 1271 aa13.77□□□□□ -0.21
Cln3-201ENSMUST00000032962 Add2Q9QYB8 725 aa13.77□□□□□ -0.21
Cln3-201ENSMUST00000032962 Ly6iQ9WU67 134 aa13.77□□□□□ -0.21
Cln3-201ENSMUST00000032962 Flt1P35969 1333 aa13.77□□□□□ -0.21
Cln3-201ENSMUST00000032962 Tbc1d4Q8BYJ6 1307 aa13.77□□□□□ -0.21
Cln3-201ENSMUST00000032962 Zfp646Q6NV66 1788 aa13.77□□□□□ -0.21
Cln3-201ENSMUST00000032962 Nrxn2E9Q7X7 1710 aa13.76□□□□□ -0.21
Cln3-201ENSMUST00000032962 D1Pas1P16381 660 aa13.76□□□□□ -0.21
Cln3-201ENSMUST00000032962 Usp48Q3V0C5 1052 aa13.76□□□□□ -0.21
Cln3-201ENSMUST00000032962 Map3k12Q60700 888 aa13.76□□□□□ -0.21
Cln3-201ENSMUST00000032962 Hand2Q61039 217 aa13.76□□□□□ -0.21
Cln3-201ENSMUST00000032962 Abtb2Q7TQI7 1024 aa13.76□□□□□ -0.21
Cln3-201ENSMUST00000032962 HdlbpQ8VDJ3 1268 aaKnown RBP13.76□□□□□ -0.21
Cln3-201ENSMUST00000032962 Znf609Q8BZ47 1413 aa13.76□□□□□ -0.21
Cln3-201ENSMUST00000032962 Cfap73J3QPZ5 306 aa13.76□□□□□ -0.21
Cln3-201ENSMUST00000032962 Bnip3O55003 187 aa13.76□□□□□ -0.21
Cln3-201ENSMUST00000032962 MsnP26041 577 aaKnown RBP13.76□□□□□ -0.21
Cln3-201ENSMUST00000032962 Slc7a3P70423 618 aa13.76□□□□□ -0.21
Cln3-201ENSMUST00000032962 Mctp2Q5RJH2 878 aa13.76□□□□□ -0.21
Cln3-201ENSMUST00000032962 Glis2Q8VDL9 521 aa13.76□□□□□ -0.21
Cln3-201ENSMUST00000032962 Utp3Q9JI13 469 aaKnown RBP13.76□□□□□ -0.21
Cln3-201ENSMUST00000032962 Carmil3Q3UFQ8 1375 aa13.76□□□□□ -0.21
Cln3-201ENSMUST00000032962 Mcm3P25206 812 aaKnown RBP13.75□□□□□ -0.21
Cln3-201ENSMUST00000032962 Ces1dQ8VCT4 565 aa13.75□□□□□ -0.21
Cln3-201ENSMUST00000032962 Trmt44Q9D2Q2 713 aa13.75□□□□□ -0.21
Cln3-201ENSMUST00000032962 Ccdc94Q9D6J3 314 aa13.75□□□□□ -0.21
Cln3-201ENSMUST00000032962 Pde3aQ9Z0X4 1141 aa13.75□□□□□ -0.21
Cln3-201ENSMUST00000032962 F2rP30558 430 aa13.75□□□□□ -0.21
Cln3-201ENSMUST00000032962 Spg7Q3ULF4 781 aa13.75□□□□□ -0.21
Cln3-201ENSMUST00000032962 Zfp91Q62511 572 aa13.75□□□□□ -0.21
Cln3-201ENSMUST00000032962 Rhot2Q8JZN7 620 aa13.75□□□□□ -0.21
Cln3-201ENSMUST00000032962 Tmem79Q9D709 391 aa13.75□□□□□ -0.21
Cln3-201ENSMUST00000032962 Ugt1a5B2RT14 529 aa13.74□□□□□ -0.21
Cln3-201ENSMUST00000032962 Ppfia1B2RXQ2 1266 aa13.74□□□□□ -0.21
Cln3-201ENSMUST00000032962 Acap3Q6NXL5 833 aa13.74□□□□□ -0.21
Cln3-201ENSMUST00000032962 Wdr24Q8CFJ9 790 aa13.74□□□□□ -0.21
Cln3-201ENSMUST00000032962 Adgra3Q7TT36 1310 aa13.74□□□□□ -0.21
Cln3-201ENSMUST00000032962 Gm45140A0A0N4SUM8 220 aa13.74□□□□□ -0.21
Cln3-201ENSMUST00000032962 Prl7d1P04769 244 aa13.74□□□□□ -0.21
Cln3-201ENSMUST00000032962 Mum1l1Q4VA55 681 aa13.74□□□□□ -0.21
Cln3-201ENSMUST00000032962 Tti2Q8BGV4 512 aa13.74□□□□□ -0.21
Cln3-201ENSMUST00000032962 Tmem179Q8BHH9 233 aa13.74□□□□□ -0.21
Cln3-201ENSMUST00000032962 Tceanc2Q8R2M0 207 aa13.74□□□□□ -0.21
Cln3-201ENSMUST00000032962 ParnQ8VDG3 624 aa13.74□□□□□ -0.21
Cln3-201ENSMUST00000032962 Rbm42Q91V81 474 aaKnown RBP13.74□□□□□ -0.21
Cln3-201ENSMUST00000032962 Mmel1Q9JLI3 765 aa13.74□□□□□ -0.21
Cln3-201ENSMUST00000032962 Ccdc162pQ0VG85 912 aa13.73□□□□□ -0.21
Cln3-201ENSMUST00000032962 Babam1Q3UI43 333 aa13.73□□□□□ -0.21
Cln3-201ENSMUST00000032962 Nell2Q61220 819 aa13.73□□□□□ -0.21
Cln3-201ENSMUST00000032962 Krt40Q6IFX3 439 aa13.73□□□□□ -0.21
Cln3-201ENSMUST00000032962 Myl6bQ8CI43 207 aa13.73□□□□□ -0.21
Cln3-201ENSMUST00000032962 Hps4Q99KG7 671 aa13.73□□□□□ -0.21
Cln3-201ENSMUST00000032962 Abl1P00520 1123 aa13.73□□□□□ -0.21
Cln3-201ENSMUST00000032962 Cd22P35329 862 aa13.73□□□□□ -0.21
Cln3-201ENSMUST00000032962 Vil1Q62468 827 aa13.73□□□□□ -0.21
Cln3-201ENSMUST00000032962 Nme8Q715T0 586 aa13.73□□□□□ -0.21
Cln3-201ENSMUST00000032962 Serpina10Q8R121 448 aa13.73□□□□□ -0.21
Cln3-201ENSMUST00000032962 Top1mtQ8R4U6 593 aa13.73□□□□□ -0.21
Cln3-201ENSMUST00000032962 Ppil4Q9CXG3 492 aaKnown RBP13.73□□□□□ -0.21
Cln3-201ENSMUST00000032962 Efcc1Q9JJF6 558 aa13.73□□□□□ -0.21
Cln3-201ENSMUST00000032962 Klhl34A2AI76 644 aa13.72□□□□□ -0.21
Cln3-201ENSMUST00000032962 Pcdhb9E9Q5G2 828 aa13.72□□□□□ -0.21
Cln3-201ENSMUST00000032962 Ddx31Q6NZQ2 687 aaKnown RBP13.72□□□□□ -0.21
Cln3-201ENSMUST00000032962 Kcnf1Q7TSH7 493 aa13.72□□□□□ -0.21
Cln3-201ENSMUST00000032962 Nup88Q8CEC0 753 aaKnown RBP13.72□□□□□ -0.21
Cln3-201ENSMUST00000032962 Lrrfip2Q91WK0 415 aa13.72□□□□□ -0.21
Cln3-201ENSMUST00000032962 StrbpQ91WM1 672 aaKnown RBP13.72□□□□□ -0.21
Cln3-201ENSMUST00000032962 Zbtb22Q9Z0G7 638 aa13.72□□□□□ -0.21
Cln3-201ENSMUST00000032962 1700003F12RikA2AKE5 210 aa13.72□□□□□ -0.21
Cln3-201ENSMUST00000032962 Dcdc2bF7BCK0 340 aa13.72□□□□□ -0.21
Cln3-201ENSMUST00000032962 Prl7a2O54831 253 aa13.72□□□□□ -0.21
Cln3-201ENSMUST00000032962 Hspd1P63038 573 aaKnown RBP13.72□□□□□ -0.21
Cln3-201ENSMUST00000032962 Oxsr1Q6P9R2 527 aa13.72□□□□□ -0.21
Cln3-201ENSMUST00000032962 Snx13Q6PHS6 957 aa13.72□□□□□ -0.21
Cln3-201ENSMUST00000032962 Shisa4Q8CA71 197 aa13.72□□□□□ -0.21
Cln3-201ENSMUST00000032962 Cchcr1Q8K2I2 770 aa13.72□□□□□ -0.21
Cln3-201ENSMUST00000032962 Dhx30Q99PU8 1217 aaKnown RBP13.72□□□□□ -0.21
Cln3-201ENSMUST00000032962 Irx4Q9QY61 515 aa13.72□□□□□ -0.21
Cln3-201ENSMUST00000032962 Add3Q9QYB5 706 aaKnown RBP13.72□□□□□ -0.21
Cln3-201ENSMUST00000032962 1700006A11RikB9EHI3 544 aa13.71□□□□□ -0.21
Cln3-201ENSMUST00000032962 D830030K20RikE9PYQ5 218 aa13.71□□□□□ -0.21
Cln3-201ENSMUST00000032962 Gm3043K7N693 218 aa13.71□□□□□ -0.21
Cln3-201ENSMUST00000032962 Gm16440K7N6G6 218 aa13.71□□□□□ -0.21
Cln3-201ENSMUST00000032962 Gm2244L7N2A3 218 aa13.71□□□□□ -0.21
Cln3-201ENSMUST00000032962 Gm3278L7N2D2 218 aa13.71□□□□□ -0.21
Cln3-201ENSMUST00000032962 Gm8271L7N2E2 218 aa13.71□□□□□ -0.21
Cln3-201ENSMUST00000032962 Nucb2P81117 420 aa13.71□□□□□ -0.21
Cln3-201ENSMUST00000032962 Map9Q3TRR0 646 aa13.71□□□□□ -0.21
Cln3-201ENSMUST00000032962 Ddx11Q6AXC6 880 aa13.71□□□□□ -0.21
Cln3-201ENSMUST00000032962 Rassf8Q8CJ96 419 aa13.71□□□□□ -0.21
Cln3-201ENSMUST00000032962 Stn1Q8K2X3 378 aa13.71□□□□□ -0.21
Cln3-201ENSMUST00000032962 Pcdhb5Q91XZ5 792 aa13.71□□□□□ -0.21
Cln3-201ENSMUST00000032962 Bmp2kQ91Z96 1138 aa13.71□□□□□ -0.21
Cln3-201ENSMUST00000032962 PdcQ9QW08 244 aa13.71□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 26.7 ms