RNA–Protein interactions for RNA: ENSMUST00000029941.15

Pdlim5-201, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Pdlim5, Length 5,016 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-201ENSMUST00000029941 Cyp4f39Q8BGU0 532 aa14.02□□□□□ -0.16
Pdlim5-201ENSMUST00000029941 Ttc14Q9CSP9 761 aa14.02□□□□□ -0.16
Pdlim5-201ENSMUST00000029941 Adcy9P51830 1353 aa14.02□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Top1Q04750 767 aaKnown RBP14.02□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 MycbpapQ5SUV2 932 aa14.02□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Arhgef6Q8K4I3 771 aa14.02□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Smco2Q9DA21 347 aa14.02□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Gm10378F6XQQ1 160 aa14.02□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Bbof1Q3V079 533 aa14.02□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Kif1bpQ6ZPU9 617 aa14.02□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Map3k11Q80XI6 850 aa14.02□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Tab2Q99K90 693 aa14.02□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Gtpbp4Q99ME9 634 aaKnown RBP14.02□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Gm3409A0A0G2JE67 319 aa14.01□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Myl3P09542 204 aa14.01□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Tubb2aQ7TMM9 445 aa14.01□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Abtb2Q7TQI7 1024 aa14.01□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Tmx1Q8VBT0 278 aa14.01□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Tubb2bQ9CWF2 445 aa14.01□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Rnf123Q5XPI3 1314 aa14.01□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 4930407I10RikD3Z5T8 1512 aa14.01□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Ube3aO08759 870 aa14.01□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Zswim4Q8C7B8 1101 aa14.01□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Hspa2P17156 633 aa14.01□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Casp1P29452 402 aa14.01□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Tubb5P99024 444 aaKnown RBP14.01□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Zfp317Q8C0Q5 607 aa14.01□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Flt4P35917 1363 aa14.01□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Ppp2r5bQ6PD28 497 aa14.01□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Cep128Q8BI22 1102 aa14.01□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Trim52Q8CDV4 233 aa14.01□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Kcnj14Q8JZN3 434 aa14.01□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Rnf34Q99KR6 376 aa14.01□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Dnajc25A2ALW5 357 aa14□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Prr16A3KMN5 304 aa14□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 EmbP21995 330 aa14□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Tspyl3Q3UYP3 334 aa14□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Lrrc45Q8CIM1 670 aa14□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Krt79Q8VED5 531 aa14□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Irs4Q9Z0Y7 1216 aa14□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Letm1Q9Z2I0 738 aa14□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Simc1E9Q6E9 1354 aa14□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Fam186bD3Z420 943 aa14□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Card6E9PWH2 1175 aa14□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Lnx1O70263 728 aa14□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Usp5P56399 858 aaKnown RBP14□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Hdgfl1Q2VPR5 283 aa14□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Sos2Q02384 1333 aa14□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Foxp1P58462 705 aa14□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Ubxn10Q8BG34 277 aa14□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Ints4Q8CIM8 964 aa14□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Chrna2Q91X60 512 aa14□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Atp10bB1AWN4 1474 aa14□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Tns3Q5SSZ5 1440 aa14□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Naa15Q80UM3 865 aaKnown RBP14□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Ube3bQ9ES34 1070 aa14□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Med23Q80YQ2 1367 aa13.99□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Speer4aF8VPX6 267 aa13.99□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Psmb7P70195 277 aa13.99□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 VmacQ8BP01 174 aa13.99□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Bola3Q8CEI1 110 aa13.99□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Nol7Q9D7Z3 254 aaKnown RBP13.99□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Tmem2Q5FWI3 1383 aa13.99□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Gm43638A0A0J9YU36 694 aa13.99□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 IntuQ059U7 942 aa13.99□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Zbtb38Q3LR78 1197 aa13.99□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Esco1Q69Z69 843 aa13.99□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Asic1Q6NXK8 526 aa13.99□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Fnbp4Q6ZQ03 1031 aa13.99□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Vps37dQ810I0 261 aa13.99□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Mknk2Q8CDB0 459 aa13.99□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 IncenpQ9WU62 880 aa13.99□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Ripor2Q80U16 1078 aa13.99□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Ppp1r37Q8BKR5 712 aa13.99□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Pcdhb15Q91Y04 786 aa13.99□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Kif1aP33173 1695 aa13.99□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Adam1aQ60813 791 aa13.99□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Tekt3Q6X6Z7 490 aa13.99□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Snd1Q78PY7 910 aaKnown RBP13.99□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Ddx10Q80Y44 875 aaKnown RBP13.99□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Cc2d1bQ8BRN9 848 aa13.99□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Homer1Q9Z2Y3 366 aa13.99□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Setdb1O88974 1307 aa13.99□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Qser1A2BIE1 1698 aa13.99□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Gm7347D3YYI9 267 aa13.98□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Lins1Q3U1D0 764 aa13.98□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Ddx17Q501J6 650 aaKnown RBP13.98□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Pde1cQ64338 706 aa13.98□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Tubgcp2Q921G8 905 aa13.98□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 NapgQ9CWZ7 312 aa13.98□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Plbd2Q3TCN2 594 aa13.98□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Etf1Q8BWY3 437 aaKnown RBP13.98□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Lrrd1Q8C0R9 853 aa13.98□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Nfxl1E9Q8I7 918 aaKnown RBP13.98□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 NpeppsQ11011 920 aa13.98□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Palm3A2TJV2 734 aa13.97□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Hmgb1P63158 215 aaKnown RBP13.97□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Tmtc2Q56A06 836 aa13.97□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Cyp2d11P24457 504 aa13.97□□□□□ -0.17
Pdlim5-201ENSMUST00000029941 Ccdc129Q14B48 1034 aa13.97□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 62 ms