RNA–Protein interactions for RNA: ENSMUST00000029222.7

Ccdc39-201, Transcript of Coiled-coil domain-containing protein 39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc39, Length 3,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39-201ENSMUST00000029222 Slc51aQ8R000 340 aa9.09□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Ubac1Q8VDI7 409 aa9.09□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Krt82Q99M74 516 aa9.09□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Dynll2Q9D0M5 89 aa9.09□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Pde6aP27664 859 aa9.08□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Usp5P56399 858 aaKnown RBP9.08□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Ccdc51Q3URS9 406 aa9.08□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Rtn1Q8K0T0 780 aa9.08□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 PdcQ9QW08 244 aa9.08□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Slfn1Q9Z0I7 337 aa9.08□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 CoblQ5NBX1 1337 aaKnown RBP9.08□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Zfyve9A2A8R0 1397 aa9.08□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Bin1O08539 588 aaKnown RBP9.08□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Nmt2O70311 529 aa9.08□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 CebpaP53566 359 aa9.08□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Snx13Q6PHS6 957 aa9.08□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Dusp9Q7TNL7 452 aa9.08□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Pramel6Q810Y9 485 aa9.08□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 DlatQ8BMF4 642 aa9.08□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Atp6v0a2P15920 856 aa9.07□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Cep131Q62036 1060 aa9.07□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Olfr118Q7TRJ6 321 aa9.07□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 DpydQ8CHR6 1025 aa9.07□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Slc44a4Q91VA1 707 aa9.07□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Tfcp2Q9ERA0 502 aa9.07□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 AtrnQ9WU60 1428 aa9.07□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Cyp3a59D3Z2W7 503 aa9.07□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Rhbdl3P58873 404 aa9.07□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 RubcnlQ3TD16 648 aa9.07□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Krt40Q6IFX3 439 aa9.07□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 HdlbpQ8VDJ3 1268 aaKnown RBP9.07□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Sh3bp5lQ99LH9 392 aa9.07□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Clip2Q9Z0H8 1047 aa9.07□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Aox1O54754 1333 aa9.07□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Cfap58B2RW38 873 aa9.07□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Gm20425E9Q035 978 aaKnown RBP9.07□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 SrprbP47758 269 aa9.07□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Exosc10P56960 887 aaKnown RBP9.07□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 1700013D24RikQ0P521 120 aa9.07□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Wdr24Q8CFJ9 790 aa9.07□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Dpf1Q9QX66 387 aa9.07□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Tnks1bp1P58871 1720 aa9.07□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Nwd2Q6P5U7 1742 aa9.07□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Ces1aE9PYP1 563 aa9.06□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Cd3dP04235 173 aa9.06□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Psd3Q2PFD7 1037 aa9.06□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 VrtnQ3SYK4 740 aa9.06□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Ces3aQ63880 571 aa9.06□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Alx1Q8C8B0 326 aa9.06□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Ces3bQ8VCU1 571 aa9.06□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Vps16Q920Q4 839 aa9.06□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Rnf123Q5XPI3 1314 aa9.06□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Ubn2Q80WC1 1314 aa9.06□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Tiam2Q6ZPF3 1715 aa9.06□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Dnai2A2AC93 623 aa9.06□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Myo1bP46735 1107 aa9.06□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Mum1l1Q4VA55 681 aa9.06□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Usp50Q6P8X6 390 aa9.06□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Zfp317Q8C0Q5 607 aa9.06□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Plcd1Q8R3B1 756 aa9.06□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Ccdc112A0AUP1 442 aa9.06□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Cacnb3P54285 484 aa9.06□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Spata5Q3UMC0 893 aaKnown RBP9.06□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Prpf38aQ4FK66 312 aaKnown RBP9.06□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Gpr101Q80T62 511 aa9.06□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Tmem179Q8BHH9 233 aa9.06□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Galntl5Q9D4M9 431 aa9.06□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Pde3aQ9Z0X4 1141 aa9.06□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Tpm3-rs7D3Z2H9 248 aa9.05□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Nfil3O08750 462 aa9.05□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Tbc1d2bQ3U0J8 965 aa9.05□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Kmt5bQ3U8K7 883 aa9.05□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Tacc1Q6Y685 774 aa9.05□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Adck5Q80V03 582 aa9.05□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Tbc1d5Q80XQ2 815 aa9.05□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Alg3Q8K2A8 438 aa9.05□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Chd1lQ9CXF7 900 aa9.05□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Trmt44Q9D2Q2 713 aa9.05□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 AU015836B2RUM3 263 aa9.05□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Kif23E9Q5G3 953 aa9.05□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Il7P10168 154 aa9.05□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Ttc5Q99LG4 440 aa9.05□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Iqca1Q9CUL5 857 aa9.05□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Mtmr2Q9Z2D1 643 aa9.05□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Med23Q80YQ2 1367 aa9.05□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Gm30191A0A0U1RNT7 187 aa9.05□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 A0A1Y7VML8 143 aa9.05□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Traf3ip1Q149C2 625 aa9.05□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Znf692Q3U381 531 aa9.05□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Mtmr3Q8K296 1196 aa9.05□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 4933402E13RikQ9D4D2 429 aa9.05□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Myoz2Q9JJW5 264 aa9.05□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Lrp6O88572 1613 aa9.05□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Tbc1d8bA3KGB4 1114 aa9.04□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 ArsiQ32KI9 573 aa9.04□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Kif22Q3V300 660 aa9.04□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 KhnynQ80U38 671 aa9.04□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Ttll4Q80UG8 1193 aa9.04□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Terb1Q8C0V1 768 aa9.04□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Wasf1Q8R5H6 559 aa9.04□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 14.4 ms