RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Kif11Q6P9P6 1052 aa12.14□□□□□ -0.47
Ciita-201ENSMUST00000023147 Ddx24Q9ESV0 857 aaKnown RBP12.14□□□□□ -0.47
Ciita-201ENSMUST00000023147 Myo5cE9Q1F5 1742 aa12.14□□□□□ -0.47
Ciita-201ENSMUST00000023147 Yeats2Q3TUF7 1407 aa12.13□□□□□ -0.47
Ciita-201ENSMUST00000023147 Kidins220E9Q9B7 1793 aa12.13□□□□□ -0.47
Ciita-201ENSMUST00000023147 Fam186bD3Z420 943 aa12.13□□□□□ -0.47
Ciita-201ENSMUST00000023147 Zbtb21E9Q444 1094 aa12.13□□□□□ -0.47
Ciita-201ENSMUST00000023147 Ankrd35E9Q9D8 996 aa12.13□□□□□ -0.47
Ciita-201ENSMUST00000023147 Krt13P08730 437 aa12.13□□□□□ -0.47
Ciita-201ENSMUST00000023147 Rassf2Q8BMS9 326 aa12.13□□□□□ -0.47
Ciita-201ENSMUST00000023147 Ccdc14Q8K2J4 934 aa12.13□□□□□ -0.47
Ciita-201ENSMUST00000023147 Ifi35Q9D8C4 286 aa12.13□□□□□ -0.47
Ciita-201ENSMUST00000023147 Abca17E9PX95 1733 aa12.13□□□□□ -0.47
Ciita-201ENSMUST00000023147 Exoc5Q3TPX4 708 aa12.13□□□□□ -0.47
Ciita-201ENSMUST00000023147 Cep63Q3UPP8 700 aa12.13□□□□□ -0.47
Ciita-201ENSMUST00000023147 Znf697Q569E7 569 aa12.13□□□□□ -0.47
Ciita-201ENSMUST00000023147 Terf2ipQ91VL8 393 aa12.13□□□□□ -0.47
Ciita-201ENSMUST00000023147 Naa16Q9DBB4 864 aa12.13□□□□□ -0.47
Ciita-201ENSMUST00000023147 Add3Q9QYB5 706 aaKnown RBP12.13□□□□□ -0.47
Ciita-201ENSMUST00000023147 Zcchc11B2RX14 1644 aaKnown RBP12.13□□□□□ -0.47
Ciita-201ENSMUST00000023147 Speer4aF8VPX6 267 aa12.13□□□□□ -0.47
Ciita-201ENSMUST00000023147 Eps15P42567 897 aa12.13□□□□□ -0.47
Ciita-201ENSMUST00000023147 Gimap8Q75N62 688 aa12.13□□□□□ -0.47
Ciita-201ENSMUST00000023147 Fam160b2Q80YR2 744 aa12.13□□□□□ -0.47
Ciita-201ENSMUST00000023147 Zfp113Q8C689 439 aa12.13□□□□□ -0.47
Ciita-201ENSMUST00000023147 Mknk2Q8CDB0 459 aa12.13□□□□□ -0.47
Ciita-201ENSMUST00000023147 Rbm42Q91V81 474 aaKnown RBP12.13□□□□□ -0.47
Ciita-201ENSMUST00000023147 Cwc25Q9DBF7 416 aa12.13□□□□□ -0.47
Ciita-201ENSMUST00000023147 Tnnc1P19123 161 aa12.13□□□□□ -0.47
Ciita-201ENSMUST00000023147 Ints4Q8CIM8 964 aa12.13□□□□□ -0.47
Ciita-201ENSMUST00000023147 Usp11Q99K46 921 aa12.13□□□□□ -0.47
Ciita-201ENSMUST00000023147 DnmbpQ6TXD4 1580 aa12.13□□□□□ -0.47
Ciita-201ENSMUST00000023147 PsdQ5DTT2 1024 aa12.12□□□□□ -0.47
Ciita-201ENSMUST00000023147 Unc5clQ6R653 518 aa12.12□□□□□ -0.47
Ciita-201ENSMUST00000023147 Cnpy2Q9QXT0 182 aa12.12□□□□□ -0.47
Ciita-201ENSMUST00000023147 Acot9Q9R0X4 439 aaKnown RBP12.12□□□□□ -0.47
Ciita-201ENSMUST00000023147 Zfp213E9QAW0 468 aa12.12□□□□□ -0.47
Ciita-201ENSMUST00000023147 Aimp1P31230 310 aaKnown RBP12.12□□□□□ -0.47
Ciita-201ENSMUST00000023147 Top1Q04750 767 aaKnown RBP12.12□□□□□ -0.47
Ciita-201ENSMUST00000023147 Cnnm2Q3TWN3 875 aa12.12□□□□□ -0.47
Ciita-201ENSMUST00000023147 RragbQ6NTA4 374 aa12.12□□□□□ -0.47
Ciita-201ENSMUST00000023147 Msantd4Q91YU3 345 aa12.12□□□□□ -0.47
Ciita-201ENSMUST00000023147 Acsbg1Q99PU5 721 aa12.12□□□□□ -0.47
Ciita-201ENSMUST00000023147 Cacna2d3Q9Z1L5 1091 aa12.12□□□□□ -0.47
Ciita-201ENSMUST00000023147 Sdad1Q80UZ2 687 aaKnown RBP12.12□□□□□ -0.47
Ciita-201ENSMUST00000023147 Dzip1Q8BMD2 852 aa12.12□□□□□ -0.47
Ciita-201ENSMUST00000023147 Vps16Q920Q4 839 aa12.12□□□□□ -0.47
Ciita-201ENSMUST00000023147 Mcur1Q9CXD6 340 aa12.12□□□□□ -0.47
Ciita-201ENSMUST00000023147 1700113H08RikE9Q9Q5 327 aa12.12□□□□□ -0.47
Ciita-201ENSMUST00000023147 SsbP32067 415 aaKnown RBP12.12□□□□□ -0.47
Ciita-201ENSMUST00000023147 Dnm1P39053 867 aa12.12□□□□□ -0.47
Ciita-201ENSMUST00000023147 Akr1b8P45377 316 aa12.12□□□□□ -0.47
Ciita-201ENSMUST00000023147 Map3k11Q80XI6 850 aa12.12□□□□□ -0.47
Ciita-201ENSMUST00000023147 Dnaaf2Q8BPI1 814 aa12.12□□□□□ -0.47
Ciita-201ENSMUST00000023147 Bbs5Q9CZQ9 341 aa12.12□□□□□ -0.47
Ciita-201ENSMUST00000023147 Pdcd6ipQ9WU78 869 aaKnown RBP12.12□□□□□ -0.47
Ciita-201ENSMUST00000023147 Msh6P54276 1358 aaKnown RBP12.12□□□□□ -0.47
Ciita-201ENSMUST00000023147 Cdc42bpgQ80UW5 1551 aa12.12□□□□□ -0.47
Ciita-201ENSMUST00000023147 Disp3A3KFU9 1347 aa12.12□□□□□ -0.47
Ciita-201ENSMUST00000023147 Hoxc9P09633 260 aa12.11□□□□□ -0.47
Ciita-201ENSMUST00000023147 Kiaa1328Q6NZK5 612 aa12.11□□□□□ -0.47
Ciita-201ENSMUST00000023147 Actr5Q80US4 605 aaKnown RBP12.11□□□□□ -0.47
Ciita-201ENSMUST00000023147 Exoc1Q8R3S6 894 aa12.11□□□□□ -0.47
Ciita-201ENSMUST00000023147 CacybpQ9CXW3 229 aa12.11□□□□□ -0.47
Ciita-201ENSMUST00000023147 Xpo4Q9ESJ0 1151 aa12.11□□□□□ -0.47
Ciita-201ENSMUST00000023147 Tnip1Q9WUU8 647 aa12.11□□□□□ -0.47
Ciita-201ENSMUST00000023147 Gipc1Q9Z0G0 333 aa12.11□□□□□ -0.47
Ciita-201ENSMUST00000023147 EmbP21995 330 aa12.11□□□□□ -0.47
Ciita-201ENSMUST00000023147 Zdhhc9P59268 364 aa12.11□□□□□ -0.47
Ciita-201ENSMUST00000023147 Kank4Q6P9J5 1016 aa12.11□□□□□ -0.47
Ciita-201ENSMUST00000023147 Krt20Q9D312 431 aa12.11□□□□□ -0.47
Ciita-201ENSMUST00000023147 Tacc2Q9JJG0 1149 aa12.11□□□□□ -0.47
Ciita-201ENSMUST00000023147 JmyQ9QXM1 983 aa12.11□□□□□ -0.47
Ciita-201ENSMUST00000023147 Nrxn1Q9CS84 1514 aa12.11□□□□□ -0.47
Ciita-201ENSMUST00000023147 Prex1Q69ZK0 1650 aa12.11□□□□□ -0.47
Ciita-201ENSMUST00000023147 Diaph2O70566 1098 aa12.11□□□□□ -0.47
Ciita-201ENSMUST00000023147 Ddit3P35639 168 aa12.11□□□□□ -0.47
Ciita-201ENSMUST00000023147 Opa1P58281 960 aa12.11□□□□□ -0.47
Ciita-201ENSMUST00000023147 Sec63Q8VHE0 760 aaKnown RBP12.11□□□□□ -0.47
Ciita-201ENSMUST00000023147 Foxp4Q9DBY0 795 aaKnown RBP12.11□□□□□ -0.47
Ciita-201ENSMUST00000023147 WtapQ9ER69 396 aa12.11□□□□□ -0.47
Ciita-201ENSMUST00000023147 Gm28510A0A087WP28 240 aa12.11□□□□□ -0.47
Ciita-201ENSMUST00000023147 Kif5bQ61768 963 aa12.11□□□□□ -0.47
Ciita-201ENSMUST00000023147 Etf1Q8BWY3 437 aaKnown RBP12.11□□□□□ -0.47
Ciita-201ENSMUST00000023147 Naa30Q8CES0 364 aa12.11□□□□□ -0.47
Ciita-201ENSMUST00000023147 Calcoco1Q8CGU1 691 aa12.11□□□□□ -0.47
Ciita-201ENSMUST00000023147 Stoml1Q8CI66 399 aa12.11□□□□□ -0.47
Ciita-201ENSMUST00000023147 SbdsP70122 250 aa12.1□□□□□ -0.47
Ciita-201ENSMUST00000023147 Nxf2Q4ZGD8 691 aa12.1□□□□□ -0.47
Ciita-201ENSMUST00000023147 Krt77Q6IFZ6 572 aa12.1□□□□□ -0.47
Ciita-201ENSMUST00000023147 Kcnk13Q8R1P5 405 aa12.1□□□□□ -0.47
Ciita-201ENSMUST00000023147 Egfl6Q9JJZ5 550 aa12.1□□□□□ -0.47
Ciita-201ENSMUST00000023147 AmfrQ9R049 643 aa12.1□□□□□ -0.47
Ciita-201ENSMUST00000023147 Prr29B1ARI9 187 aa12.1□□□□□ -0.47
Ciita-201ENSMUST00000023147 Elmsan1E9Q2I4 1089 aaKnown RBP12.1□□□□□ -0.47
Ciita-201ENSMUST00000023147 Ppp1r9aH3BJD6 1292 aa12.1□□□□□ -0.47
Ciita-201ENSMUST00000023147 Ankrd13dQ6PD24 605 aa12.1□□□□□ -0.47
Ciita-201ENSMUST00000023147 Ranbp6Q8BIV3 1105 aa12.1□□□□□ -0.47
Ciita-201ENSMUST00000023147 Zbtb43Q9DAI4 467 aa12.1□□□□□ -0.47
Ciita-201ENSMUST00000023147 Rsrc1Q9DBU6 334 aa12.1□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 22.3 ms