RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Lmbr1lQ9D1E5 489 aa13.83□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Lonp2Q9DBN5 852 aa13.83□□□□□ -0.19
Ufd1-201ENSMUST00000005394 Epb41l2O70318 988 aaKnown RBP13.83□□□□□ -0.2
Ufd1-201ENSMUST00000005394 LtkP08923 888 aa13.83□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Lama4P97927 1816 aa13.83□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Nol10Q5RJG1 687 aaKnown RBP13.83□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Ppfibp1Q8C8U0 969 aaKnown RBP13.83□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Sh2b1Q91ZM2 756 aa13.83□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Ccdc83Q9D4V3 305 aa13.83□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Klhl40Q9D783 621 aa13.83□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Abca3Q8R420 1704 aa13.82□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Npc1l1Q6T3U4 1333 aa13.82□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Bin1O08539 588 aaKnown RBP13.82□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Ppp4r3aQ6P2K6 820 aa13.82□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Ankib1Q6ZPS6 1085 aa13.82□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Nek5Q7TSC3 627 aa13.82□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Q8C1R3 189 aa13.82□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Ccdc85cE9Q6B2 420 aa13.82□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Arid4aF8VPQ2 1261 aaKnown RBP13.82□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Tdo2P48776 406 aa13.82□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Nbr1P97432 988 aa13.82□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Slc7a1Q09143 622 aa13.82□□□□□ -0.2
Ufd1-201ENSMUST00000005394 ZyxQ62523 564 aa13.82□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Ankrd13dQ6PD24 605 aa13.82□□□□□ -0.2
Ufd1-201ENSMUST00000005394 U2af1l4Q8BGJ9 220 aa13.82□□□□□ -0.2
Ufd1-201ENSMUST00000005394 SdsQ8VBT2 327 aa13.82□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Gnl2Q99LH1 728 aaKnown RBP13.82□□□□□ -0.2
Ufd1-201ENSMUST00000005394 FosbP13346 338 aa13.81□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Pald1P70261 859 aa13.81□□□□□ -0.2
Ufd1-201ENSMUST00000005394 ErmnQ5EBJ4 281 aa13.81□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Tc2nQ91XT6 489 aa13.81□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Tjp1P39447 1745 aaKnown RBP13.8□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Exoc3l2D3YUP5 789 aa13.8□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Hspd1P63038 573 aaKnown RBP13.8□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Cdc23Q8BGZ4 597 aa13.8□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Rec8Q8C5S7 591 aa13.8□□□□□ -0.2
Ufd1-201ENSMUST00000005394 ApobrQ8VBT6 942 aa13.8□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Card14Q99KF0 999 aa13.8□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Sh3bp5Q9Z131 463 aa13.8□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Rps6ka4Q9Z2B9 773 aa13.8□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Cyp2d34L7N463 504 aa13.8□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Nkx2-3P97334 362 aa13.8□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Znhit6Q3UFB2 460 aaKnown RBP13.8□□□□□ -0.2
Ufd1-201ENSMUST00000005394 ItgadQ3V0T4 1168 aa13.8□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Trim25Q61510 634 aaKnown RBP13.8□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Brd2Q7JJ13 798 aaKnown RBP13.8□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Enox1Q8BHR2 643 aaKnown RBP13.8□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Klhl30Q8C3F7 581 aa13.8□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Rassf8Q8CJ96 419 aa13.8□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Alg3Q8K2A8 438 aa13.8□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Arhgef6Q8K4I3 771 aa13.8□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Smc1bQ920F6 1248 aa13.8□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Rdm1Q9CQK3 281 aa13.8□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Pes1Q9EQ61 584 aaKnown RBP13.8□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Acot9Q9R0X4 439 aaKnown RBP13.8□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Fut8Q9WTS2 575 aa13.8□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Large1Q9Z1M7 756 aa13.8□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Gm3409A0A0G2JE67 319 aa13.79□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Diaph1O08808 1255 aa13.79□□□□□ -0.2
Ufd1-201ENSMUST00000005394 RargP18911 458 aaKnown RBP13.79□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Cyp2d10P24456 504 aa13.79□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Pcdhb14Q6PB90 796 aa13.79□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Ddx58Q6Q899 926 aa13.79□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Evc2Q8K1G2 1220 aa13.79□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Prc1Q99K43 603 aaKnown RBP13.79□□□□□ -0.2
Ufd1-201ENSMUST00000005394 MbipQ99LQ1 341 aa13.79□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Ppil4Q9CXG3 492 aaKnown RBP13.79□□□□□ -0.2
Ufd1-201ENSMUST00000005394 AtrnQ9WU60 1428 aa13.79□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Gm29094F6Q785 221 aa13.78□□□□□ -0.2
Ufd1-201ENSMUST00000005394 NefhP19246 1090 aa13.78□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Vps54Q5SPW0 977 aa13.78□□□□□ -0.2
Ufd1-201ENSMUST00000005394 NfkbibQ60778 359 aa13.78□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Recql4Q75NR7 1216 aaKnown RBP13.78□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Ripor2Q80U16 1078 aa13.78□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Fam102bQ8BQS4 339 aa13.78□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Tmx1Q8VBT0 278 aa13.78□□□□□ -0.2
Ufd1-201ENSMUST00000005394 MthfsQ9D110 203 aa13.78□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Ercc3P49135 783 aa13.78□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Arhgef16Q3U5C8 713 aa13.78□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Tsr1Q5SWD9 803 aa13.78□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Adora1Q60612 326 aa13.78□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Ppp1r1bQ60829 194 aa13.78□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Dpf2Q61103 391 aaKnown RBP13.78□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Ccdc57Q6PHN1 1016 aa13.78□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Nop9Q8BMC4 636 aaKnown RBP13.78□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Pdia6Q922R8 440 aaKnown RBP13.78□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Vnn1Q9Z0K8 512 aa13.78□□□□□ -0.2
Ufd1-201ENSMUST00000005394 Gm21663A0A0G2JE01 267 aa13.77□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Gm7361D3Z6R1 267 aa13.77□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Gm20425E9Q035 978 aaKnown RBP13.77□□□□□ -0.21
Ufd1-201ENSMUST00000005394 5031410I06RikE9Q4E0 267 aa13.77□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Gm1979E9QAN3 267 aa13.77□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Gm5862K7N5V5 267 aa13.77□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Gm10220K7N660 267 aa13.77□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Hap1O35668 628 aa13.77□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Pde11aP0C1Q2 933 aa13.77□□□□□ -0.21
Ufd1-201ENSMUST00000005394 SrprbP47758 269 aa13.77□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Ttll12Q3UDE2 639 aa13.77□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Ccnl1Q52KE7 532 aaKnown RBP13.77□□□□□ -0.21
Ufd1-201ENSMUST00000005394 Ddx46Q569Z5 1032 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 59.7 ms