RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Peak1Q69Z38 1735 aa17.48■□□□□ 0.39
Ercc1-201ENSMUST00000003645 D1Pas1P16381 660 aa17.48■□□□□ 0.39
Ercc1-201ENSMUST00000003645 Gxylt1Q3UHH8 404 aa17.48■□□□□ 0.39
Ercc1-201ENSMUST00000003645 Hand2Q61039 217 aa17.48■□□□□ 0.39
Ercc1-201ENSMUST00000003645 HelbQ6NVF4 1074 aa17.48■□□□□ 0.39
Ercc1-201ENSMUST00000003645 1700010I14RikQ7TPG0 532 aa17.48■□□□□ 0.39
Ercc1-201ENSMUST00000003645 Olfr118Q7TRJ6 321 aa17.48■□□□□ 0.39
Ercc1-201ENSMUST00000003645 Mageb2A2AHM0 380 aa17.47■□□□□ 0.39
Ercc1-201ENSMUST00000003645 Casp12O08736 419 aa17.47■□□□□ 0.39
Ercc1-201ENSMUST00000003645 Cap1P40124 474 aa17.47■□□□□ 0.39
Ercc1-201ENSMUST00000003645 Ercc3P49135 783 aa17.47■□□□□ 0.39
Ercc1-201ENSMUST00000003645 NyxP83503 476 aa17.47■□□□□ 0.39
Ercc1-201ENSMUST00000003645 Lins1Q3U1D0 764 aa17.47■□□□□ 0.39
Ercc1-201ENSMUST00000003645 Spty2d1Q68FG3 682 aa17.47■□□□□ 0.39
Ercc1-201ENSMUST00000003645 DaglaQ6WQJ1 1044 aa17.47■□□□□ 0.39
Ercc1-201ENSMUST00000003645 Xrcc4Q924T3 326 aa17.47■□□□□ 0.39
Ercc1-201ENSMUST00000003645 Tmem79Q9D709 391 aa17.47■□□□□ 0.39
Ercc1-201ENSMUST00000003645 Stk32bQ9JJX8 414 aa17.47■□□□□ 0.39
Ercc1-201ENSMUST00000003645 NpcdF8VQB8 469 aa17.46■□□□□ 0.39
Ercc1-201ENSMUST00000003645 Akap2O54931 893 aa17.46■□□□□ 0.39
Ercc1-201ENSMUST00000003645 DnttP09838 530 aa17.46■□□□□ 0.39
Ercc1-201ENSMUST00000003645 Spata5Q3UMC0 893 aaKnown RBP17.46■□□□□ 0.39
Ercc1-201ENSMUST00000003645 Klhdc9Q3USL1 350 aa17.46■□□□□ 0.39
Ercc1-201ENSMUST00000003645 Ehmt1Q5DW34 1296 aa17.46■□□□□ 0.39
Ercc1-201ENSMUST00000003645 Rassf8Q8CJ96 419 aa17.46■□□□□ 0.39
Ercc1-201ENSMUST00000003645 Cdca7lQ922M5 438 aa17.46■□□□□ 0.39
Ercc1-201ENSMUST00000003645 Tgm5Q9D7I9 724 aa17.46■□□□□ 0.39
Ercc1-201ENSMUST00000003645 NesQ6P5H2 1864 aaKnown RBP17.46■□□□□ 0.39
Ercc1-201ENSMUST00000003645 Cyp3a59D3Z2W7 503 aa17.45■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Pde4aO89084 844 aa17.45■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Cd3dP04235 173 aa17.45■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Pde11aP0C1Q2 933 aa17.45■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Q3TYL0 343 aa17.45■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Prpf38aQ4FK66 312 aaKnown RBP17.45■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Fxr1Q61584 677 aaKnown RBP17.45■□□□□ 0.38
Ercc1-201ENSMUST00000003645 GnptabQ69ZN6 1235 aa17.45■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Trmt2aQ8BNV1 574 aaKnown RBP17.45■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Ttc12Q8BW49 704 aa17.45■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Atad2Q8CDM1 1040 aa17.45■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Spon1Q8VCC9 807 aa17.45■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Cnot6lQ8VEG6 555 aa17.45■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Bap1Q99PU7 728 aa17.45■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Ccdc39Q9D5Y1 937 aa17.45■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Tnip1Q9WUU8 647 aa17.45■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Psma5Q9Z2U1 241 aaKnown RBP17.45■□□□□ 0.38
Ercc1-201ENSMUST00000003645 FAM186AQ9D9R9 1790 aa17.44■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Irgm2A0A140LIF8 407 aa17.44■□□□□ 0.38
Ercc1-201ENSMUST00000003645 CnpP16330 420 aa17.44■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Wnt10bP48614 389 aa17.44■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Tigd5Q499M4 642 aa17.44■□□□□ 0.38
Ercc1-201ENSMUST00000003645 ErmnQ5EBJ4 281 aa17.44■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Ppm1gQ61074 542 aa17.44■□□□□ 0.38
Ercc1-201ENSMUST00000003645 LdhdQ7TNG8 484 aa17.44■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Pramel6Q810Y9 485 aa17.44■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Kbtbd13Q8C828 458 aa17.44■□□□□ 0.38
Ercc1-201ENSMUST00000003645 AnlnQ8K298 1121 aaKnown RBP17.44■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Glis2Q8VDL9 521 aa17.44■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Pcdhb22Q91XZ8 794 aa17.44■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Ppil2Q9D787 521 aa17.44■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Slx4ipQ9D7Y9 413 aa17.44■□□□□ 0.38
Ercc1-201ENSMUST00000003645 RabggtaQ9JHK4 567 aa17.44■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Ces1aE9PYP1 563 aa17.43■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Sptbn5F6UCX4 1208 aa17.43■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Cyp2d34L7N463 504 aa17.43■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Cacnb3P54285 484 aa17.43■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Eef2P58252 858 aaKnown RBP17.43■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Pald1P70261 859 aa17.43■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Gjb2Q00977 226 aa17.43■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Ppp1r9bQ6R891 817 aaKnown RBP17.43■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Ttll4Q80UG8 1193 aa17.43■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Tnpo1Q8BFY9 898 aaKnown RBP17.43■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Tti2Q8BGV4 512 aa17.43■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Ccdc158Q8CDI6 1109 aa17.43■□□□□ 0.38
Ercc1-201ENSMUST00000003645 HibadhQ99L13 335 aaKnown RBP17.43■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Borcs6Q9D6W8 360 aa17.43■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Rai14Q9EP71 979 aaKnown RBP17.43■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Lbhd1A0A087WPA0 259 aa17.42■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Flvcr1B2RXV4 560 aa17.42■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Exosc10P56960 887 aaKnown RBP17.42■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Rps6kb1Q8BSK8 525 aa17.42■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Rasgrp4Q8BTM9 673 aa17.42■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Yipf1Q91VU1 306 aa17.42■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Ascc2Q91WR3 749 aa17.42■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Sept14Q9DA97 430 aa17.42■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Tsc2Q61037 1814 aa17.42■□□□□ 0.38
Ercc1-201ENSMUST00000003645 NrapQ80XB4 1728 aa17.42■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Fam186bD3Z420 943 aa17.41■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Kif20aP97329 887 aa17.41■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Fam178bQ24JP3 464 aa17.41■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Cnot7Q60809 285 aa17.41■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Trappc12Q8K2L8 797 aa17.41■□□□□ 0.38
Ercc1-201ENSMUST00000003645 NinQ61043 2035 aa17.41■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Phactr2B1AVP0 632 aa17.4■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Vcam1P29533 739 aa17.4■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Ccdc174Q3U155 467 aa17.4■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Ncbp1Q3UYV9 790 aaKnown RBP17.4■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Utp18Q5SSI6 552 aaKnown RBP17.4■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Otop3Q80UF9 577 aa17.4■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Htatsf1Q8BGC0 757 aa17.4■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Rnf41Q8BH75 317 aa17.4■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 18.4 ms