RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 TMEM18Q96B42 140 aa13.36□□□□□ -0.27
PHGDH-229ENST00000641891 ATG101Q9BSB4 218 aa13.36□□□□□ -0.27
PHGDH-229ENST00000641891 IGLV11-55A0A075B6I3 123 aa13.35□□□□□ -0.27
PHGDH-229ENST00000641891 GATCO43716 136 aaKnown RBP13.35□□□□□ -0.27
PHGDH-229ENST00000641891 IGHV3-23P01764 117 aa13.35□□□□□ -0.27
PHGDH-229ENST00000641891 LINC00310P59036 64 aa13.35□□□□□ -0.27
PHGDH-229ENST00000641891 C9orf152Q5JTZ5 239 aa13.35□□□□□ -0.27
PHGDH-229ENST00000641891 C5orf17Q8NAS9 161 aa13.35□□□□□ -0.27
PHGDH-229ENST00000641891 MBD6Q96DN6 1003 aa13.35□□□□□ -0.27
PHGDH-229ENST00000641891 AJUBAQ96IF1 538 aa13.35□□□□□ -0.27
PHGDH-229ENST00000641891 GNB1LQ9BYB4 327 aa13.35□□□□□ -0.27
PHGDH-229ENST00000641891 LPAR2Q9HBW0 351 aa13.35□□□□□ -0.27
PHGDH-229ENST00000641891 KLF12Q9Y4X4 402 aa13.35□□□□□ -0.27
PHGDH-229ENST00000641891 NPIPB5A8MRT5 1133 aa13.35□□□□□ -0.27
PHGDH-229ENST00000641891 OOSP1A8MZH6 123 aa13.35□□□□□ -0.27
PHGDH-229ENST00000641891 TCRAP04437 139 aa13.35□□□□□ -0.27
PHGDH-229ENST00000641891 IL4P05112 153 aa13.35□□□□□ -0.27
PHGDH-229ENST00000641891 EBI3Q14213 229 aa13.35□□□□□ -0.27
PHGDH-229ENST00000641891 KIAA1644Q3SXP7 199 aa13.35□□□□□ -0.27
PHGDH-229ENST00000641891 FAM231DQ6ZW35 169 aa13.35□□□□□ -0.27
PHGDH-229ENST00000641891 ZNF491Q8N8L2 437 aa13.35□□□□□ -0.27
PHGDH-229ENST00000641891 C17orf77Q96MU5 243 aa13.35□□□□□ -0.27
PHGDH-229ENST00000641891 NAT8BQ9UHF3 227 aa13.35□□□□□ -0.27
PHGDH-229ENST00000641891 TOMM40O96008 361 aa13.34□□□□□ -0.27
PHGDH-229ENST00000641891 CRISP2P16562 243 aa13.34□□□□□ -0.27
PHGDH-229ENST00000641891 RAB4BP61018 213 aa13.34□□□□□ -0.27
PHGDH-229ENST00000641891 LINC00322Q6ZN03 302 aaPredicted RBP13.34□□□□□ -0.27
PHGDH-229ENST00000641891 Q71RC1 249 aaPredicted RBP13.34□□□□□ -0.27
PHGDH-229ENST00000641891 SHANK2-AS3Q9BTD1 123 aa13.34□□□□□ -0.27
PHGDH-229ENST00000641891 TMEM14CQ9P0S9 112 aa13.34□□□□□ -0.27
PHGDH-229ENST00000641891 IZUMO1RA6ND01 250 aa13.34□□□□□ -0.27
PHGDH-229ENST00000641891 F8W735 103 aaPredicted RBP13.34□□□□□ -0.27
PHGDH-229ENST00000641891 H3BRN7 92 aa13.34□□□□□ -0.27
PHGDH-229ENST00000641891 GNG7O60262 68 aa13.34□□□□□ -0.27
PHGDH-229ENST00000641891 EGR2P11161 476 aaPredicted RBP13.34□□□□□ -0.27
PHGDH-229ENST00000641891 OR5R1Q8NH85 324 aa13.34□□□□□ -0.27
PHGDH-229ENST00000641891 RNF125Q96EQ8 232 aa13.34□□□□□ -0.27
PHGDH-229ENST00000641891 MED13LQ71F56 2210 aa13.33□□□□□ -0.28
PHGDH-229ENST00000641891 WNK2Q9Y3S1 2297 aa13.33□□□□□ -0.28
PHGDH-229ENST00000641891 TRAV8-1A0A0A6YYK1 113 aa13.33□□□□□ -0.28
PHGDH-229ENST00000641891 TRBV9A0A0B4J1U6 114 aa13.33□□□□□ -0.28
PHGDH-229ENST00000641891 IGHV7-81A0A0B4J1V7 117 aa13.33□□□□□ -0.28
PHGDH-229ENST00000641891 TRAV20A0A0B4J274 112 aa13.33□□□□□ -0.28
PHGDH-229ENST00000641891 AMY1AP04745 511 aa13.33□□□□□ -0.28
PHGDH-229ENST00000641891 HIST1H1EP10412 219 aaKnown RBP13.33□□□□□ -0.28
PHGDH-229ENST00000641891 DNLZQ5SXM8 178 aa13.33□□□□□ -0.28
PHGDH-229ENST00000641891 TTC9CQ8N5M4 171 aa13.33□□□□□ -0.28
PHGDH-229ENST00000641891 Q8N9W7 124 aa13.33□□□□□ -0.28
PHGDH-229ENST00000641891 GPR82Q96P67 336 aa13.33□□□□□ -0.28
PHGDH-229ENST00000641891 PRO1933Q9H354 126 aa13.33□□□□□ -0.28
PHGDH-229ENST00000641891 SERF1AO75920 110 aa13.32□□□□□ -0.28
PHGDH-229ENST00000641891 NDUFB8O95169 186 aa13.32□□□□□ -0.28
PHGDH-229ENST00000641891 IGHV4-39P01824 125 aa13.32□□□□□ -0.28
PHGDH-229ENST00000641891 SAA4P35542 130 aa13.32□□□□□ -0.28
PHGDH-229ENST00000641891 UBE2E1P51965 193 aa13.32□□□□□ -0.28
PHGDH-229ENST00000641891 USF2Q15853 346 aaPredicted RBP13.32□□□□□ -0.28
PHGDH-229ENST00000641891 CMTM2Q8TAZ6 248 aa13.32□□□□□ -0.28
PHGDH-229ENST00000641891 GRAMD2BQ96HH9 432 aa13.32□□□□□ -0.28
PHGDH-229ENST00000641891 HSPB9Q9BQS6 159 aa13.32□□□□□ -0.28
PHGDH-229ENST00000641891 MLST8Q9BVC4 326 aa13.32□□□□□ -0.28
PHGDH-229ENST00000641891 OTORQ9NRC9 128 aa13.32□□□□□ -0.28
PHGDH-229ENST00000641891 WI2-2373I1.2A0A1W2PRP0 233 aa13.32□□□□□ -0.28
PHGDH-229ENST00000641891 OVOL3O00110 214 aa13.32□□□□□ -0.28
PHGDH-229ENST00000641891 OR2J3O76001 311 aa13.32□□□□□ -0.28
PHGDH-229ENST00000641891 LTAP01374 205 aa13.32□□□□□ -0.28
PHGDH-229ENST00000641891 Q56UQ5 140 aa13.32□□□□□ -0.28
PHGDH-229ENST00000641891 WDR73Q6P4I2 378 aa13.32□□□□□ -0.28
PHGDH-229ENST00000641891 FMC1Q96HJ9 113 aa13.32□□□□□ -0.28
PHGDH-229ENST00000641891 TMEM68Q96MH6 324 aa13.32□□□□□ -0.28
PHGDH-229ENST00000641891 FCGR2BP31994 310 aaPredicted RBP13.31□□□□□ -0.28
PHGDH-229ENST00000641891 MFAP4P55083 255 aa13.31□□□□□ -0.28
PHGDH-229ENST00000641891 NUP35Q8NFH5 326 aa13.31□□□□□ -0.28
PHGDH-229ENST00000641891 TBL2Q9Y4P3 447 aaKnown RBP13.31□□□□□ -0.28
PHGDH-229ENST00000641891 GOLT1AQ6ZVE7 132 aa13.31□□□□□ -0.28
PHGDH-229ENST00000641891 GNB4Q9HAV0 340 aa13.31□□□□□ -0.28
PHGDH-229ENST00000641891 AKAP6Q13023 2319 aa13.31□□□□□ -0.28
PHGDH-229ENST00000641891 PKD1L2Q7Z442 2459 aa13.3□□□□□ -0.28
PHGDH-229ENST00000641891 TRBV19A0A075B6N1 114 aa13.3□□□□□ -0.28
PHGDH-229ENST00000641891 MT-ND6P03923 174 aa13.3□□□□□ -0.28
PHGDH-229ENST00000641891 FAM106CPP0CH98 169 aa13.3□□□□□ -0.28
PHGDH-229ENST00000641891 IGLC2P0DOY2 106 aa13.3□□□□□ -0.28
PHGDH-229ENST00000641891 BPIFA4PQ86YQ2 179 aa13.3□□□□□ -0.28
PHGDH-229ENST00000641891 NEU1Q99519 415 aa13.3□□□□□ -0.28
PHGDH-229ENST00000641891 ASCL2Q99929 193 aa13.3□□□□□ -0.28
PHGDH-229ENST00000641891 C21orf62Q9NYP8 219 aa13.3□□□□□ -0.28
PHGDH-229ENST00000641891 OR2T8A6NH00 312 aa13.3□□□□□ -0.28
PHGDH-229ENST00000641891 SH2D7A6NKC9 451 aaPredicted RBP13.3□□□□□ -0.28
PHGDH-229ENST00000641891 HLA-DRB1P01911 266 aa13.3□□□□□ -0.28
PHGDH-229ENST00000641891 RPL19P84098 196 aaKnown RBP13.3□□□□□ -0.28
PHGDH-229ENST00000641891 PRR31Q5SQ13 230 aa13.3□□□□□ -0.28
PHGDH-229ENST00000641891 GDF5OSQ5U4N7 250 aa13.3□□□□□ -0.28
PHGDH-229ENST00000641891 Q86TA4 180 aa13.3□□□□□ -0.28
PHGDH-229ENST00000641891 BAGE3Q86Y29 109 aa13.3□□□□□ -0.28
PHGDH-229ENST00000641891 PIP4P2Q8N4L2 257 aa13.3□□□□□ -0.28
PHGDH-229ENST00000641891 VWC2LB2RUY7 222 aa13.29□□□□□ -0.28
PHGDH-229ENST00000641891 BMPR1BO00238 502 aa13.29□□□□□ -0.28
PHGDH-229ENST00000641891 MRPS12O15235 138 aaKnown RBP13.29□□□□□ -0.28
PHGDH-229ENST00000641891 IGLV2-11P01706 119 aa13.29□□□□□ -0.28
PHGDH-229ENST00000641891 TCF24Q7RTU0 167 aa13.29□□□□□ -0.28
PHGDH-229ENST00000641891 OR4F17Q8NGA8 305 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms