RNA–Protein interactions for RNA: ENST00000622647.3

ZNF48-206, Transcript of zinc finger protein 48, humanhuman

TSL 4 BASIC

Gene ZNF48, Length 2,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48-206ENST00000622647 TRAV20A0A0B4J274 112 aa13.96□□□□□ -0.17
ZNF48-206ENST00000622647 NDUFA3O95167 84 aa13.96□□□□□ -0.17
ZNF48-206ENST00000622647 IL4P05112 153 aa13.96□□□□□ -0.17
ZNF48-206ENST00000622647 ARPC1AQ92747 370 aa13.96□□□□□ -0.17
ZNF48-206ENST00000622647 SIRPDQ9H106 197 aa13.96□□□□□ -0.17
ZNF48-206ENST00000622647 NAT8BQ9UHF3 227 aa13.96□□□□□ -0.17
ZNF48-206ENST00000622647 OR2J3O76001 311 aa13.96□□□□□ -0.18
ZNF48-206ENST00000622647 MYCNOSP40205 109 aa13.96□□□□□ -0.18
ZNF48-206ENST00000622647 YPEL3P61236 119 aaPredicted RBP13.96□□□□□ -0.18
ZNF48-206ENST00000622647 S100A12P80511 92 aa13.96□□□□□ -0.18
ZNF48-206ENST00000622647 NUDT10Q8NFP7 164 aa13.96□□□□□ -0.18
ZNF48-206ENST00000622647 NUDT11Q96G61 164 aa13.96□□□□□ -0.18
ZNF48-206ENST00000622647 MYO18BQ8IUG5 2567 aa13.95□□□□□ -0.18
ZNF48-206ENST00000622647 CELSR2Q9HCU4 2923 aa13.95□□□□□ -0.18
ZNF48-206ENST00000622647 FCGR2BP31994 310 aaPredicted RBP13.95□□□□□ -0.18
ZNF48-206ENST00000622647 TAS2R60P59551 318 aa13.95□□□□□ -0.18
ZNF48-206ENST00000622647 FANCD2OSQ96PS1 177 aa13.95□□□□□ -0.18
ZNF48-206ENST00000622647 TBX15Q96SF7 602 aa13.95□□□□□ -0.18
ZNF48-206ENST00000622647 CSMD2Q7Z408 3487 aa13.95□□□□□ -0.18
ZNF48-206ENST00000622647 GNG7O60262 68 aa13.95□□□□□ -0.18
ZNF48-206ENST00000622647 Q56UQ5 140 aa13.95□□□□□ -0.18
ZNF48-206ENST00000622647 COA6Q5JTJ3 125 aaKnown RBP13.95□□□□□ -0.18
ZNF48-206ENST00000622647 LINC00322Q6ZN03 302 aaPredicted RBP13.95□□□□□ -0.18
ZNF48-206ENST00000622647 GATCO43716 136 aaKnown RBP13.94□□□□□ -0.18
ZNF48-206ENST00000622647 PDLIM4P50479 330 aa13.94□□□□□ -0.18
ZNF48-206ENST00000622647 LMO4P61968 165 aa13.94□□□□□ -0.18
ZNF48-206ENST00000622647 STXBP6Q8NFX7 210 aa13.94□□□□□ -0.18
ZNF48-206ENST00000622647 PRDM13Q9H4Q3 707 aa13.94□□□□□ -0.18
ZNF48-206ENST00000622647 TP53TG3Q9ULZ0 132 aa13.94□□□□□ -0.18
ZNF48-206ENST00000622647 IGHV2-70DA0A0C4DH43 119 aa13.94□□□□□ -0.18
ZNF48-206ENST00000622647 NDUFB8O95169 186 aa13.94□□□□□ -0.18
ZNF48-206ENST00000622647 GZMBP10144 247 aa13.93□□□□□ -0.18
ZNF48-206ENST00000622647 SAA4P35542 130 aa13.93□□□□□ -0.18
ZNF48-206ENST00000622647 PAX2Q02962 417 aa13.93□□□□□ -0.18
ZNF48-206ENST00000622647 ZNF562Q6V9R5 426 aa13.93□□□□□ -0.18
ZNF48-206ENST00000622647 HSPB9Q9BQS6 159 aa13.93□□□□□ -0.18
ZNF48-206ENST00000622647 OR2T8A6NH00 312 aa13.93□□□□□ -0.18
ZNF48-206ENST00000622647 IGHV4-39P01824 125 aa13.93□□□□□ -0.18
ZNF48-206ENST00000622647 CRISP2P16562 243 aa13.93□□□□□ -0.18
ZNF48-206ENST00000622647 CCDC144NLQ6NUI1 221 aa13.93□□□□□ -0.18
ZNF48-206ENST00000622647 GBGT1Q8N5D6 347 aa13.93□□□□□ -0.18
ZNF48-206ENST00000622647 ECSCRQ19T08 205 aa13.92□□□□□ -0.18
ZNF48-206ENST00000622647 GOLT1AQ6ZVE7 132 aa13.92□□□□□ -0.18
ZNF48-206ENST00000622647 ZNF491Q8N8L2 437 aa13.92□□□□□ -0.18
ZNF48-206ENST00000622647 TMEM18Q96B42 140 aa13.92□□□□□ -0.18
ZNF48-206ENST00000622647 CENPEQ02224 2701 aa13.92□□□□□ -0.18
ZNF48-206ENST00000622647 LINC01548A6NM66 108 aa13.92□□□□□ -0.18
ZNF48-206ENST00000622647 PLP1P60201 277 aa13.92□□□□□ -0.18
ZNF48-206ENST00000622647 USF2Q15853 346 aaPredicted RBP13.92□□□□□ -0.18
ZNF48-206ENST00000622647 TMEM183BQ1AE95 376 aa13.92□□□□□ -0.18
ZNF48-206ENST00000622647 RNF125Q96EQ8 232 aa13.92□□□□□ -0.18
ZNF48-206ENST00000622647 MRPL27Q9P0M9 148 aaKnown RBP13.92□□□□□ -0.18
ZNF48-206ENST00000622647 TCRAP04437 139 aa13.91□□□□□ -0.18
ZNF48-206ENST00000622647 C1orf122Q6ZSJ8 110 aa13.91□□□□□ -0.18
ZNF48-206ENST00000622647 BAGE3Q86Y29 109 aa13.91□□□□□ -0.18
ZNF48-206ENST00000622647 PIP4P2Q8N4L2 257 aa13.91□□□□□ -0.18
ZNF48-206ENST00000622647 TMUB1Q9BVT8 246 aa13.91□□□□□ -0.18
ZNF48-206ENST00000622647 ABCA2Q9BZC7 2435 aa13.91□□□□□ -0.18
ZNF48-206ENST00000622647 IGHV7-81A0A0B4J1V7 117 aa13.91□□□□□ -0.18
ZNF48-206ENST00000622647 SERF1AO75920 110 aa13.91□□□□□ -0.18
ZNF48-206ENST00000622647 TMEM136Q6ZRR5 245 aa13.91□□□□□ -0.18
ZNF48-206ENST00000622647 TCF24Q7RTU0 167 aa13.91□□□□□ -0.18
ZNF48-206ENST00000622647 PRNTQ86SH4 94 aa13.91□□□□□ -0.18
ZNF48-206ENST00000622647 CIARTQ8N365 385 aaPredicted RBP13.91□□□□□ -0.18
ZNF48-206ENST00000622647 IGLV11-55A0A075B6I3 123 aa13.9□□□□□ -0.18
ZNF48-206ENST00000622647 SMIM27A0A1W2PRY6 76 aa13.9□□□□□ -0.18
ZNF48-206ENST00000622647 RNF224P0DH78 156 aa13.9□□□□□ -0.18
ZNF48-206ENST00000622647 EGR2P11161 476 aaPredicted RBP13.9□□□□□ -0.18
ZNF48-206ENST00000622647 CAMPP49913 170 aa13.9□□□□□ -0.18
ZNF48-206ENST00000622647 LINC00310P59036 64 aa13.9□□□□□ -0.18
ZNF48-206ENST00000622647 TMEM219Q86XT9 240 aa13.9□□□□□ -0.18
ZNF48-206ENST00000622647 Q8N6K4 173 aa13.9□□□□□ -0.18
ZNF48-206ENST00000622647 AJUBAQ96IF1 538 aa13.9□□□□□ -0.18
ZNF48-206ENST00000622647 ATG101Q9BSB4 218 aa13.9□□□□□ -0.18
ZNF48-206ENST00000622647 JOSD1Q15040 202 aaPredicted RBP13.9□□□□□ -0.18
ZNF48-206ENST00000622647 Q8N9W7 124 aa13.9□□□□□ -0.18
ZNF48-206ENST00000622647 C5orf17Q8NAS9 161 aa13.9□□□□□ -0.18
ZNF48-206ENST00000622647 SSBP4Q9BWG4 385 aaPredicted RBP13.9□□□□□ -0.18
ZNF48-206ENST00000622647 SOX21Q9Y651 276 aaPredicted RBP13.9□□□□□ -0.18
ZNF48-206ENST00000622647 BRD3OSQ6XYD6 125 aa13.89□□□□□ -0.19
ZNF48-206ENST00000622647 NUP35Q8NFH5 326 aa13.89□□□□□ -0.19
ZNF48-206ENST00000622647 CMTM2Q8TAZ6 248 aa13.89□□□□□ -0.19
ZNF48-206ENST00000622647 F8W735 103 aaPredicted RBP13.89□□□□□ -0.19
ZNF48-206ENST00000622647 M0R3E3 92 aa13.89□□□□□ -0.19
ZNF48-206ENST00000622647 HIST1H1EP10412 219 aaKnown RBP13.89□□□□□ -0.19
ZNF48-206ENST00000622647 MFAP4P55083 255 aa13.89□□□□□ -0.19
ZNF48-206ENST00000622647 GPR82Q96P67 336 aa13.89□□□□□ -0.19
ZNF48-206ENST00000622647 SHANK2-AS3Q9BTD1 123 aa13.89□□□□□ -0.19
ZNF48-206ENST00000622647 LINC00527Q9UJ94 153 aa13.89□□□□□ -0.19
ZNF48-206ENST00000622647 G3V318 75 aa13.88□□□□□ -0.19
ZNF48-206ENST00000622647 FAM106CPP0CH98 169 aa13.88□□□□□ -0.19
ZNF48-206ENST00000622647 MINOS1Q5TGZ0 78 aa13.88□□□□□ -0.19
ZNF48-206ENST00000622647 NRGNQ92686 78 aa13.88□□□□□ -0.19
ZNF48-206ENST00000622647 NEU1Q99519 415 aa13.88□□□□□ -0.19
ZNF48-206ENST00000622647 SRSF8Q9BRL6 282 aaKnown RBP13.88□□□□□ -0.19
ZNF48-206ENST00000622647 GNB4Q9HAV0 340 aa13.88□□□□□ -0.19
ZNF48-206ENST00000622647 C21orf62Q9NYP8 219 aa13.88□□□□□ -0.19
ZNF48-206ENST00000622647 MINOS1-NBL1R4GNA1 71 aa13.88□□□□□ -0.19
ZNF48-206ENST00000622647 TRAV9-1A0A075B6T8 112 aa13.88□□□□□ -0.19
ZNF48-206ENST00000622647 VWC2LB2RUY7 222 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms