RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 B3GALT5-AS1P59052 145 aa8.03□□□□□ -1.12
CLTCL1-211ENST00000621271 GNG5P63218 68 aa8.02□□□□□ -1.13
CLTCL1-211ENST00000621271 TCF15Q12870 199 aa8.02□□□□□ -1.13
CLTCL1-211ENST00000621271 ZNF324BQ6AW86 544 aaPredicted RBP8.02□□□□□ -1.13
CLTCL1-211ENST00000621271 HIST3H2BBQ8N257 126 aa8.02□□□□□ -1.13
CLTCL1-211ENST00000621271 HIST1H2BLQ99880 126 aa8.02□□□□□ -1.13
CLTCL1-211ENST00000621271 PMCHL2Q9BQD1 86 aa8.02□□□□□ -1.13
CLTCL1-211ENST00000621271 BDP1A6H8Y1 2624 aa8.02□□□□□ -1.13
CLTCL1-211ENST00000621271 IGHV3-53P01767 116 aa8.02□□□□□ -1.13
CLTCL1-211ENST00000621271 APOHP02749 345 aaPredicted RBP8.02□□□□□ -1.13
CLTCL1-211ENST00000621271 KLF17Q5JT82 389 aaPredicted RBP8.02□□□□□ -1.13
CLTCL1-211ENST00000621271 SLX1AQ9BQ83 275 aa8.02□□□□□ -1.13
CLTCL1-211ENST00000621271 RHPN1-AS1Q9BWJ2 59 aa8.02□□□□□ -1.13
CLTCL1-211ENST00000621271 DAZ1Q9NQZ3 744 aaKnown RBP8.02□□□□□ -1.13
CLTCL1-211ENST00000621271 LINC01619G3V211 115 aa8.02□□□□□ -1.13
CLTCL1-211ENST00000621271 FCN3O75636 299 aa8.02□□□□□ -1.13
CLTCL1-211ENST00000621271 NDPQ00604 133 aa8.02□□□□□ -1.13
CLTCL1-211ENST00000621271 FAM89BQ8N5H3 189 aa8.02□□□□□ -1.13
CLTCL1-211ENST00000621271 GBF1Q92538 1859 aa8.02□□□□□ -1.13
CLTCL1-211ENST00000621271 NRN1Q9NPD7 142 aa8.02□□□□□ -1.13
CLTCL1-211ENST00000621271 EPDR1Q9UM22 224 aa8.02□□□□□ -1.13
CLTCL1-211ENST00000621271 OVOL3O00110 214 aa8.02□□□□□ -1.13
CLTCL1-211ENST00000621271 CD28P10747 220 aa8.02□□□□□ -1.13
CLTCL1-211ENST00000621271 CKS1BP61024 79 aa8.02□□□□□ -1.13
CLTCL1-211ENST00000621271 RPRMLQ8N4K4 120 aa8.02□□□□□ -1.13
CLTCL1-211ENST00000621271 TMEM242Q9NWH2 141 aa8.02□□□□□ -1.13
CLTCL1-211ENST00000621271 LCTP09848 1927 aa8.02□□□□□ -1.13
CLTCL1-211ENST00000621271 NOTCH2Q04721 2471 aa8.02□□□□□ -1.13
CLTCL1-211ENST00000621271 FAM208BQ5VWN6 2430 aa8.01□□□□□ -1.13
CLTCL1-211ENST00000621271 SRRM4A7MD48 611 aaKnown RBP8.01□□□□□ -1.13
CLTCL1-211ENST00000621271 PYYP10082 97 aa8.01□□□□□ -1.13
CLTCL1-211ENST00000621271 LURAP1LQ8IV03 231 aa8.01□□□□□ -1.13
CLTCL1-211ENST00000621271 FOXC2Q99958 501 aa8.01□□□□□ -1.13
CLTCL1-211ENST00000621271 ARHGEF17Q96PE2 2063 aaPredicted RBP8.01□□□□□ -1.13
CLTCL1-211ENST00000621271 PRB1P04280 392 aa8.01□□□□□ -1.13
CLTCL1-211ENST00000621271 FXYD7P58549 80 aa8.01□□□□□ -1.13
CLTCL1-211ENST00000621271 TCF23Q7RTU1 214 aa8.01□□□□□ -1.13
CLTCL1-211ENST00000621271 IMMP2LQ96T52 175 aa8.01□□□□□ -1.13
CLTCL1-211ENST00000621271 ATP5G3P48201 142 aa8.01□□□□□ -1.13
CLTCL1-211ENST00000621271 TMEM86BQ8N661 226 aa8.01□□□□□ -1.13
CLTCL1-211ENST00000621271 PKDREJQ9NTG1 2253 aa8.01□□□□□ -1.13
CLTCL1-211ENST00000621271 TRBV24-1A0A075B6N3 115 aa8.01□□□□□ -1.13
CLTCL1-211ENST00000621271 PPIFP30405 207 aaKnown RBP8.01□□□□□ -1.13
CLTCL1-211ENST00000621271 WFDC1Q9HC57 220 aa8.01□□□□□ -1.13
CLTCL1-211ENST00000621271 JKAMPQ9P055 326 aa8.01□□□□□ -1.13
CLTCL1-211ENST00000621271 CYSLTR1Q9Y271 337 aa8.01□□□□□ -1.13
CLTCL1-211ENST00000621271 ZFHX2Q9C0A1 2572 aaPredicted RBP8□□□□□ -1.13
CLTCL1-211ENST00000621271 IGKV1-12A0A0C4DH73 117 aa8□□□□□ -1.13
CLTCL1-211ENST00000621271 A0A1B0GW64 132 aa8□□□□□ -1.13
CLTCL1-211ENST00000621271 H0YJW9 148 aa8□□□□□ -1.13
CLTCL1-211ENST00000621271 IGKV1D-12P01611 117 aa8□□□□□ -1.13
CLTCL1-211ENST00000621271 PSG1P11464 419 aa8□□□□□ -1.13
CLTCL1-211ENST00000621271 CEACAM8P31997 349 aaPredicted RBP8□□□□□ -1.13
CLTCL1-211ENST00000621271 CCL20P78556 96 aa8□□□□□ -1.13
CLTCL1-211ENST00000621271 HGFACQ04756 655 aa8□□□□□ -1.13
CLTCL1-211ENST00000621271 SRSF4Q08170 494 aaKnown RBP8□□□□□ -1.13
CLTCL1-211ENST00000621271 PRDM13Q9H4Q3 707 aa8□□□□□ -1.13
CLTCL1-211ENST00000621271 TCF20Q9UGU0 1960 aaKnown RBP8□□□□□ -1.13
CLTCL1-211ENST00000621271 IGHV2-70DA0A0C4DH43 119 aa8□□□□□ -1.13
CLTCL1-211ENST00000621271 SLC17A3O00476 420 aa8□□□□□ -1.13
CLTCL1-211ENST00000621271 APOC4P55056 127 aa8□□□□□ -1.13
CLTCL1-211ENST00000621271 C14orf144Q96I85 54 aa8□□□□□ -1.13
CLTCL1-211ENST00000621271 SIGLEC9Q9Y336 463 aa8□□□□□ -1.13
CLTCL1-211ENST00000621271 PCNX1Q96RV3 2341 aa8□□□□□ -1.13
CLTCL1-211ENST00000621271 TRAV12-3A0A0B4J271 114 aa8□□□□□ -1.13
CLTCL1-211ENST00000621271 CXCL1P09341 107 aa8□□□□□ -1.13
CLTCL1-211ENST00000621271 DAD1P61803 113 aa8□□□□□ -1.13
CLTCL1-211ENST00000621271 LHFPL1Q86WI0 220 aa8□□□□□ -1.13
CLTCL1-211ENST00000621271 IL17RELQ6ZVW7 336 aa7.99□□□□□ -1.13
CLTCL1-211ENST00000621271 LAMTOR2Q9Y2Q5 125 aa7.99□□□□□ -1.13
CLTCL1-211ENST00000621271 CHD5Q8TDI0 1954 aa7.99□□□□□ -1.13
CLTCL1-211ENST00000621271 IGKV1D-17A0A075B6S4 117 aa7.99□□□□□ -1.13
CLTCL1-211ENST00000621271 A0A1W2PRE2 83 aa7.99□□□□□ -1.13
CLTCL1-211ENST00000621271 PMS2P5A8MQ11 134 aa7.99□□□□□ -1.13
CLTCL1-211ENST00000621271 F2Z2F3 143 aa7.99□□□□□ -1.13
CLTCL1-211ENST00000621271 CLPSP04118 112 aa7.99□□□□□ -1.13
CLTCL1-211ENST00000621271 DEFB131AP59861 70 aa7.99□□□□□ -1.13
CLTCL1-211ENST00000621271 IGHV3-73A0A0B4J1V6 119 aa7.99□□□□□ -1.13
CLTCL1-211ENST00000621271 HIGD1CA8MV81 97 aa7.99□□□□□ -1.13
CLTCL1-211ENST00000621271 F5H768 121 aa7.99□□□□□ -1.13
CLTCL1-211ENST00000621271 LDLRAD4O15165 306 aa7.99□□□□□ -1.13
CLTCL1-211ENST00000621271 SERF1AO75920 110 aa7.99□□□□□ -1.13
CLTCL1-211ENST00000621271 ID3Q02535 119 aa7.99□□□□□ -1.13
CLTCL1-211ENST00000621271 A0A0A6YYD4 124 aa7.99□□□□□ -1.13
CLTCL1-211ENST00000621271 PI4KAP42356 2102 aa7.99□□□□□ -1.13
CLTCL1-211ENST00000621271 SUPT4H1P63272 117 aaKnown RBP7.99□□□□□ -1.13
CLTCL1-211ENST00000621271 GFI1BQ5VTD9 330 aa7.99□□□□□ -1.13
CLTCL1-211ENST00000621271 NPIPB5A8MRT5 1133 aa7.99□□□□□ -1.13
CLTCL1-211ENST00000621271 ADCYAP1P18509 176 aa7.99□□□□□ -1.13
CLTCL1-211ENST00000621271 TDGF1P3P51864 188 aa7.99□□□□□ -1.13
CLTCL1-211ENST00000621271 SRSF1Q07955 248 aaKnown RBP eCLIP7.99□□□□□ -1.13
CLTCL1-211ENST00000621271 C1orf122Q6ZSJ8 110 aa7.99□□□□□ -1.13
CLTCL1-211ENST00000621271 LINC00477Q96M19 166 aa7.99□□□□□ -1.13
CLTCL1-211ENST00000621271 PYY3Q5JQD4 70 aa7.98□□□□□ -1.13
CLTCL1-211ENST00000621271 S100A7L2Q5SY68 101 aa7.98□□□□□ -1.13
CLTCL1-211ENST00000621271 NIT1Q86X76 327 aa7.98□□□□□ -1.13
CLTCL1-211ENST00000621271 AMBPP02760 352 aa7.98□□□□□ -1.13
CLTCL1-211ENST00000621271 MBD3L1Q8WWY6 194 aa7.98□□□□□ -1.13
CLTCL1-211ENST00000621271 PTPRQQ9UMZ3 2332 aa7.98□□□□□ -1.13
CLTCL1-211ENST00000621271 LY6G6EA0A0G2JKS1 128 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms