RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 HLA-DRB1P01911 266 aa12.04□□□□□ -0.48
MBD1-217ENST00000588937 RNF224P0DH78 156 aa12.04□□□□□ -0.48
MBD1-217ENST00000588937 WDR73Q6P4I2 378 aa12.04□□□□□ -0.48
MBD1-217ENST00000588937 Q8N9W7 124 aa12.04□□□□□ -0.48
MBD1-217ENST00000588937 FMC1Q96HJ9 113 aa12.04□□□□□ -0.48
MBD1-217ENST00000588937 LINC00479Q96M42 142 aa12.04□□□□□ -0.48
MBD1-217ENST00000588937 SHANK2-AS3Q9BTD1 123 aa12.04□□□□□ -0.48
MBD1-217ENST00000588937 Q9H3A6 140 aa12.04□□□□□ -0.48
MBD1-217ENST00000588937 OTORQ9NRC9 128 aa12.04□□□□□ -0.48
MBD1-217ENST00000588937 KLF12Q9Y4X4 402 aa12.04□□□□□ -0.48
MBD1-217ENST00000588937 DCHS2Q6V1P9 2916 aa12.03□□□□□ -0.48
MBD1-217ENST00000588937 ZNF705GA8MUZ8 300 aaPredicted RBP12.03□□□□□ -0.48
MBD1-217ENST00000588937 H3BRN7 92 aa12.03□□□□□ -0.48
MBD1-217ENST00000588937 NDUFS8O00217 210 aa12.03□□□□□ -0.48
MBD1-217ENST00000588937 NPFFO15130 113 aa12.03□□□□□ -0.48
MBD1-217ENST00000588937 SAA4P35542 130 aa12.03□□□□□ -0.48
MBD1-217ENST00000588937 NDPQ00604 133 aa12.03□□□□□ -0.48
MBD1-217ENST00000588937 BPIFA4PQ86YQ2 179 aa12.03□□□□□ -0.48
MBD1-217ENST00000588937 OR8I2Q8N0Y5 310 aa12.03□□□□□ -0.48
MBD1-217ENST00000588937 RNF125Q96EQ8 232 aa12.03□□□□□ -0.48
MBD1-217ENST00000588937 PACRGQ96M98 296 aaPredicted RBP12.03□□□□□ -0.48
MBD1-217ENST00000588937 HIST1H2BLQ99880 126 aa12.03□□□□□ -0.48
MBD1-217ENST00000588937 SERTAD4Q9NUC0 356 aa12.03□□□□□ -0.48
MBD1-217ENST00000588937 IGHV7-81A0A0B4J1V7 117 aa12.02□□□□□ -0.48
MBD1-217ENST00000588937 WI2-2373I1.2A0A1W2PRP0 233 aa12.02□□□□□ -0.48
MBD1-217ENST00000588937 SMIM27A0A1W2PRY6 76 aa12.02□□□□□ -0.48
MBD1-217ENST00000588937 GNG5P63218 68 aa12.02□□□□□ -0.48
MBD1-217ENST00000588937 KLF17Q5JT82 389 aaPredicted RBP12.02□□□□□ -0.48
MBD1-217ENST00000588937 LEMD1Q68G75 181 aa12.02□□□□□ -0.48
MBD1-217ENST00000588937 ZNF491Q8N8L2 437 aa12.02□□□□□ -0.48
MBD1-217ENST00000588937 OR4F17Q8NGA8 305 aa12.02□□□□□ -0.48
MBD1-217ENST00000588937 FAM168AQ92567 244 aa12.02□□□□□ -0.48
MBD1-217ENST00000588937 GPR82Q96P67 336 aa12.02□□□□□ -0.48
MBD1-217ENST00000588937 GNB1LQ9BYB4 327 aa12.02□□□□□ -0.48
MBD1-217ENST00000588937 C21orf62Q9NYP8 219 aa12.02□□□□□ -0.48
MBD1-217ENST00000588937 COL12A1Q99715 3063 aa12.02□□□□□ -0.48
MBD1-217ENST00000588937 TRAV34A0A0B4J273 112 aa12.02□□□□□ -0.49
MBD1-217ENST00000588937 GATCO43716 136 aaKnown RBP12.02□□□□□ -0.49
MBD1-217ENST00000588937 MT-ND6P03923 174 aa12.02□□□□□ -0.49
MBD1-217ENST00000588937 IL4P05112 153 aa12.02□□□□□ -0.49
MBD1-217ENST00000588937 SNRPCP09234 159 aaKnown RBP12.02□□□□□ -0.49
MBD1-217ENST00000588937 Q56UQ5 140 aa12.02□□□□□ -0.49
MBD1-217ENST00000588937 DNLZQ5SXM8 178 aa12.02□□□□□ -0.49
MBD1-217ENST00000588937 AJUBAQ96IF1 538 aa12.02□□□□□ -0.49
MBD1-217ENST00000588937 TXN2Q99757 166 aa12.02□□□□□ -0.49
MBD1-217ENST00000588937 TCRAP04437 139 aa12.01□□□□□ -0.49
MBD1-217ENST00000588937 S100A7P31151 101 aa12.01□□□□□ -0.49
MBD1-217ENST00000588937 PAX8Q06710 450 aa12.01□□□□□ -0.49
MBD1-217ENST00000588937 PYY3Q5JQD4 70 aa12.01□□□□□ -0.49
MBD1-217ENST00000588937 LYPD1Q8N2G4 141 aa12.01□□□□□ -0.49
MBD1-217ENST00000588937 NHLRC2Q8NBF2 726 aa12.01□□□□□ -0.49
MBD1-217ENST00000588937 CMTM2Q8TAZ6 248 aa12.01□□□□□ -0.49
MBD1-217ENST00000588937 GRAMD2BQ96HH9 432 aa12.01□□□□□ -0.49
MBD1-217ENST00000588937 MRPL18Q9H0U6 180 aaKnown RBP12.01□□□□□ -0.49
MBD1-217ENST00000588937 FCGR2BP31994 310 aaPredicted RBP12□□□□□ -0.49
MBD1-217ENST00000588937 ADMP35318 185 aa12□□□□□ -0.49
MBD1-217ENST00000588937 FAM120AOSQ5T036 256 aa12□□□□□ -0.49
MBD1-217ENST00000588937 TMEM18Q96B42 140 aa12□□□□□ -0.49
MBD1-217ENST00000588937 ZNF586Q9NXT0 402 aa12□□□□□ -0.49
MBD1-217ENST00000588937 RPH3ALQ9UNE2 315 aa12□□□□□ -0.49
MBD1-217ENST00000588937 LRRK2Q5S007 2527 aa12□□□□□ -0.49
MBD1-217ENST00000588937 CENPVL3A0A0U1RRI6 287 aa12□□□□□ -0.49
MBD1-217ENST00000588937 IZUMO1RA6ND01 250 aa12□□□□□ -0.49
MBD1-217ENST00000588937 SNURFLB1AK76 121 aa12□□□□□ -0.49
MBD1-217ENST00000588937 EGR2P11161 476 aaPredicted RBP12□□□□□ -0.49
MBD1-217ENST00000588937 PLA2G2AP14555 144 aa12□□□□□ -0.49
MBD1-217ENST00000588937 CBLN1P23435 193 aa12□□□□□ -0.49
MBD1-217ENST00000588937 IER3P46695 156 aa12□□□□□ -0.49
MBD1-217ENST00000588937 CLEC2AQ6UVW9 174 aa12□□□□□ -0.49
MBD1-217ENST00000588937 FAM110DQ8TAY7 271 aaPredicted RBP12□□□□□ -0.49
MBD1-217ENST00000588937 VN1R17PQ8TDU5 208 aa12□□□□□ -0.49
MBD1-217ENST00000588937 TRBV19A0A075B6N1 114 aa11.99□□□□□ -0.49
MBD1-217ENST00000588937 OR2J3O76001 311 aa11.99□□□□□ -0.49
MBD1-217ENST00000588937 NDUFB8O95169 186 aa11.99□□□□□ -0.49
MBD1-217ENST00000588937 AMBPP02760 352 aa11.99□□□□□ -0.49
MBD1-217ENST00000588937 NUDT10Q8NFP7 164 aa11.99□□□□□ -0.49
MBD1-217ENST00000588937 C10orf105Q8TEF2 133 aa11.99□□□□□ -0.49
MBD1-217ENST00000588937 NUDT11Q96G61 164 aa11.99□□□□□ -0.49
MBD1-217ENST00000588937 GSN-AS1Q9NRJ2 163 aa11.99□□□□□ -0.49
MBD1-217ENST00000588937 LTAP01374 205 aa11.98□□□□□ -0.49
MBD1-217ENST00000588937 AMY1AP04745 511 aa11.98□□□□□ -0.49
MBD1-217ENST00000588937 IGLC2P0DOY2 106 aa11.98□□□□□ -0.49
MBD1-217ENST00000588937 USF2Q15853 346 aaPredicted RBP11.98□□□□□ -0.49
MBD1-217ENST00000588937 KLK9Q2XQG4 91 aa11.98□□□□□ -0.49
MBD1-217ENST00000588937 RASL11AQ6T310 242 aa11.98□□□□□ -0.49
MBD1-217ENST00000588937 MBD6Q96DN6 1003 aa11.98□□□□□ -0.49
MBD1-217ENST00000588937 MLST8Q9BVC4 326 aa11.98□□□□□ -0.49
MBD1-217ENST00000588937 FBXL7Q9UJT9 491 aa11.98□□□□□ -0.49
MBD1-217ENST00000588937 KLK9Q9UKQ9 250 aa11.98□□□□□ -0.49
MBD1-217ENST00000588937 TRBV6-1A0A0K0K1D8 114 aa11.97□□□□□ -0.49
MBD1-217ENST00000588937 VWC2LB2RUY7 222 aa11.97□□□□□ -0.49
MBD1-217ENST00000588937 F8W735 103 aaPredicted RBP11.97□□□□□ -0.49
MBD1-217ENST00000588937 H3BTX0 84 aa11.97□□□□□ -0.49
MBD1-217ENST00000588937 J3QKU1 62 aa11.97□□□□□ -0.49
MBD1-217ENST00000588937 K7EQM0 130 aa11.97□□□□□ -0.49
MBD1-217ENST00000588937 PRR27Q6MZM9 219 aa11.97□□□□□ -0.49
MBD1-217ENST00000588937 UNQ5815/PRO19632Q6UWF5 114 aa11.97□□□□□ -0.49
MBD1-217ENST00000588937 PIP4P2Q8N4L2 257 aa11.97□□□□□ -0.49
MBD1-217ENST00000588937 TMUB1Q9BVT8 246 aa11.97□□□□□ -0.49
MBD1-217ENST00000588937 C7orf69Q9H7B7 122 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms