RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 CBLN1P23435 193 aa10.57□□□□□ -0.72
LINC00563-201ENST00000566370 CD24P25063 80 aa10.57□□□□□ -0.72
LINC00563-201ENST00000566370 TPPP2P59282 170 aa10.57□□□□□ -0.72
LINC00563-201ENST00000566370 PDE6HQ13956 83 aa10.57□□□□□ -0.72
LINC00563-201ENST00000566370 CT83Q5H943 113 aa10.57□□□□□ -0.72
LINC00563-201ENST00000566370 PRR27Q6MZM9 219 aa10.57□□□□□ -0.72
LINC00563-201ENST00000566370 CLEC2AQ6UVW9 174 aa10.57□□□□□ -0.72
LINC00563-201ENST00000566370 GBGT1Q8N5D6 347 aa10.57□□□□□ -0.72
LINC00563-201ENST00000566370 FAM110DQ8TAY7 271 aaPredicted RBP10.57□□□□□ -0.72
LINC00563-201ENST00000566370 FAM168AQ92567 244 aa10.57□□□□□ -0.72
LINC00563-201ENST00000566370 TBX15Q96SF7 602 aa10.57□□□□□ -0.72
LINC00563-201ENST00000566370 TPRP12270 2363 aaKnown RBP10.56□□□□□ -0.72
LINC00563-201ENST00000566370 CFAP47Q6ZTR5 3102 aa10.56□□□□□ -0.72
LINC00563-201ENST00000566370 FBLL1A6NHQ2 334 aaKnown RBP10.56□□□□□ -0.72
LINC00563-201ENST00000566370 A8MWL6 223 aa10.56□□□□□ -0.72
LINC00563-201ENST00000566370 TSTD3H0UI37 97 aa10.56□□□□□ -0.72
LINC00563-201ENST00000566370 SAA4P35542 130 aa10.56□□□□□ -0.72
LINC00563-201ENST00000566370 CSN1S1P47710 185 aa10.56□□□□□ -0.72
LINC00563-201ENST00000566370 RAB9AP51151 201 aa10.56□□□□□ -0.72
LINC00563-201ENST00000566370 GNG5P63218 68 aa10.56□□□□□ -0.72
LINC00563-201ENST00000566370 PSG9Q00887 426 aa10.56□□□□□ -0.72
LINC00563-201ENST00000566370 JOSD1Q15040 202 aaPredicted RBP10.56□□□□□ -0.72
LINC00563-201ENST00000566370 ATP5L2Q7Z4Y8 100 aa10.56□□□□□ -0.72
LINC00563-201ENST00000566370 BAGE3Q86Y29 109 aa10.56□□□□□ -0.72
LINC00563-201ENST00000566370 OR4B1Q8NGF8 309 aa10.56□□□□□ -0.72
LINC00563-201ENST00000566370 TSKUQ8WUA8 353 aa10.56□□□□□ -0.72
LINC00563-201ENST00000566370 GSX1Q9H4S2 264 aaPredicted RBP10.56□□□□□ -0.72
LINC00563-201ENST00000566370 TRAV34A0A0B4J273 112 aa10.55□□□□□ -0.72
LINC00563-201ENST00000566370 C19orf84I3L1E1 186 aa10.55□□□□□ -0.72
LINC00563-201ENST00000566370 LTAP01374 205 aa10.55□□□□□ -0.72
LINC00563-201ENST00000566370 P01737 135 aa10.55□□□□□ -0.72
LINC00563-201ENST00000566370 RPL7P18124 248 aaKnown RBP10.55□□□□□ -0.72
LINC00563-201ENST00000566370 FCGR2BP31994 310 aaPredicted RBP10.55□□□□□ -0.72
LINC00563-201ENST00000566370 OR10J3Q5JRS4 329 aa10.55□□□□□ -0.72
LINC00563-201ENST00000566370 ARL6IP6Q8N6S5 226 aa10.55□□□□□ -0.72
LINC00563-201ENST00000566370 ZNF491Q8N8L2 437 aa10.55□□□□□ -0.72
LINC00563-201ENST00000566370 NHLRC2Q8NBF2 726 aa10.55□□□□□ -0.72
LINC00563-201ENST00000566370 NUDT10Q8NFP7 164 aa10.55□□□□□ -0.72
LINC00563-201ENST00000566370 WIPF2Q8TF74 440 aaPredicted RBP10.55□□□□□ -0.72
LINC00563-201ENST00000566370 NUDT11Q96G61 164 aa10.55□□□□□ -0.72
LINC00563-201ENST00000566370 RPP21Q9H633 154 aaKnown RBP10.55□□□□□ -0.72
LINC00563-201ENST00000566370 ABCA4P78363 2273 aa10.54□□□□□ -0.72
LINC00563-201ENST00000566370 TRBV19A0A075B6N1 114 aa10.54□□□□□ -0.72
LINC00563-201ENST00000566370 BMPR1BO00238 502 aa10.54□□□□□ -0.72
LINC00563-201ENST00000566370 IGHV4-39P01824 125 aa10.54□□□□□ -0.72
LINC00563-201ENST00000566370 TCL1AP56279 114 aa10.54□□□□□ -0.72
LINC00563-201ENST00000566370 Q0VG73 95 aa10.54□□□□□ -0.72
LINC00563-201ENST00000566370 IQCJQ1A5X6 159 aa10.54□□□□□ -0.72
LINC00563-201ENST00000566370 LEMD1Q68G75 181 aa10.54□□□□□ -0.72
LINC00563-201ENST00000566370 UNQ5815/PRO19632Q6UWF5 114 aa10.54□□□□□ -0.72
LINC00563-201ENST00000566370 DYNAPQ8N1N2 210 aa10.54□□□□□ -0.72
LINC00563-201ENST00000566370 Q8N9W7 124 aa10.54□□□□□ -0.72
LINC00563-201ENST00000566370 FANCD2OSQ96PS1 177 aa10.54□□□□□ -0.72
LINC00563-201ENST00000566370 TMUB1Q9BVT8 246 aa10.54□□□□□ -0.72
LINC00563-201ENST00000566370 GFRA4Q9GZZ7 299 aa10.54□□□□□ -0.72
LINC00563-201ENST00000566370 RABAC1Q9UI14 185 aa10.54□□□□□ -0.72
LINC00563-201ENST00000566370 FBXL7Q9UJT9 491 aa10.54□□□□□ -0.72
LINC00563-201ENST00000566370 ZFP30Q9Y2G7 519 aa10.54□□□□□ -0.72
LINC00563-201ENST00000566370 IGHV7-81A0A0B4J1V7 117 aa10.53□□□□□ -0.72
LINC00563-201ENST00000566370 FAM231BA6NCW3 169 aa10.53□□□□□ -0.72
LINC00563-201ENST00000566370 OR2J3O76001 311 aa10.53□□□□□ -0.72
LINC00563-201ENST00000566370 APCSP02743 223 aa10.53□□□□□ -0.72
LINC00563-201ENST00000566370 DSCR9P59020 149 aa10.53□□□□□ -0.72
LINC00563-201ENST00000566370 FAM162BQ5T6X4 162 aa10.53□□□□□ -0.72
LINC00563-201ENST00000566370 RUSC1-AS1Q66K80 236 aa10.53□□□□□ -0.72
LINC00563-201ENST00000566370 MRPL54Q6P161 138 aaKnown RBP10.53□□□□□ -0.72
LINC00563-201ENST00000566370 Q86TA4 180 aa10.53□□□□□ -0.72
LINC00563-201ENST00000566370 TMEM75Q8N9X5 138 aa10.53□□□□□ -0.72
LINC00563-201ENST00000566370 LINC00479Q96M42 142 aa10.53□□□□□ -0.72
LINC00563-201ENST00000566370 ZNF586Q9NXT0 402 aa10.53□□□□□ -0.72
LINC00563-201ENST00000566370 NDUFB8O95169 186 aa10.52□□□□□ -0.73
LINC00563-201ENST00000566370 PKIAP61925 76 aa10.52□□□□□ -0.73
LINC00563-201ENST00000566370 KLF17Q5JT82 389 aaPredicted RBP10.52□□□□□ -0.73
LINC00563-201ENST00000566370 ASPHD1Q5U4P2 390 aa10.52□□□□□ -0.73
LINC00563-201ENST00000566370 TMEM136Q6ZRR5 245 aa10.52□□□□□ -0.73
LINC00563-201ENST00000566370 MBD6Q96DN6 1003 aa10.52□□□□□ -0.73
LINC00563-201ENST00000566370 SAMD10Q9BYL1 202 aa10.52□□□□□ -0.73
LINC00563-201ENST00000566370 MOB4Q9Y3A3 225 aa10.52□□□□□ -0.73
LINC00563-201ENST00000566370 CT45A10P0DMU9 189 aa10.51□□□□□ -0.73
LINC00563-201ENST00000566370 ESDP10768 282 aa10.51□□□□□ -0.73
LINC00563-201ENST00000566370 ECSCRQ19T08 205 aa10.51□□□□□ -0.73
LINC00563-201ENST00000566370 GOLT1AQ6ZVE7 132 aa10.51□□□□□ -0.73
LINC00563-201ENST00000566370 C10orf105Q8TEF2 133 aa10.51□□□□□ -0.73
LINC00563-201ENST00000566370 EEF1AKMT3Q96AZ1 226 aa10.51□□□□□ -0.73
LINC00563-201ENST00000566370 MS4A10Q96PG2 267 aa10.51□□□□□ -0.73
LINC00563-201ENST00000566370 ATP6V0BQ99437 205 aa10.51□□□□□ -0.73
LINC00563-201ENST00000566370 SPOCK3Q9BQ16 436 aa10.51□□□□□ -0.73
LINC00563-201ENST00000566370 COL6A6A6NMZ7 2263 aa10.51□□□□□ -0.73
LINC00563-201ENST00000566370 ATMQ13315 3056 aa10.51□□□□□ -0.73
LINC00563-201ENST00000566370 PLXNB1O43157 2135 aa10.51□□□□□ -0.73
LINC00563-201ENST00000566370 IGHV1-69DA0A0B4J2H0 117 aa10.5□□□□□ -0.73
LINC00563-201ENST00000566370 CENPVL3A0A0U1RRI6 287 aa10.5□□□□□ -0.73
LINC00563-201ENST00000566370 SPINK4O60575 86 aa10.5□□□□□ -0.73
LINC00563-201ENST00000566370 IGHV1-69P01742 117 aa10.5□□□□□ -0.73
LINC00563-201ENST00000566370 SNRPCP09234 159 aaKnown RBP10.5□□□□□ -0.73
LINC00563-201ENST00000566370 IGLC2P0DOY2 106 aa10.5□□□□□ -0.73
LINC00563-201ENST00000566370 COL8A1P27658 744 aa10.5□□□□□ -0.73
LINC00563-201ENST00000566370 ATP5J2P56134 94 aa10.5□□□□□ -0.73
LINC00563-201ENST00000566370 NDPQ00604 133 aa10.5□□□□□ -0.73
LINC00563-201ENST00000566370 PAX8Q06710 450 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms