RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 NEU4Q8WWR8 484 aaPredicted RBP2.41□□□□□ -2.02
CHD9-218ENST00000566029 SSBP3Q9BWW4 388 aaPredicted RBP2.41□□□□□ -2.02
CHD9-218ENST00000566029 HRKO00198 91 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 FSTL3O95633 263 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 NBL1P41271 181 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 CCL14Q16627 93 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 SHISA2Q6UWI4 295 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 IL17RELQ6ZVW7 336 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 WFDC3Q8IUB2 231 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 ZNF645Q8N7E2 425 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 TMEM158Q8WZ71 300 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 MS4A6AQ9H2W1 248 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 TNFAIP6P98066 277 aaPredicted RBP2.41□□□□□ -2.02
CHD9-218ENST00000566029 PRSS41Q7RTY9 318 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 GCSAMQ8N6F7 178 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 CDX2Q99626 313 aaPredicted RBP2.41□□□□□ -2.02
CHD9-218ENST00000566029 FGF22Q9HCT0 170 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 NXT2Q9NPJ8 142 aaKnown RBP2.41□□□□□ -2.02
CHD9-218ENST00000566029 TRAV13-1A0A0B4J241 112 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 K7ERS5 55 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 RS1O15537 224 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 FCN3O75636 299 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 PEAR1Q5VY43 1037 aaPredicted RBP2.41□□□□□ -2.02
CHD9-218ENST00000566029 C8orf86Q6ZUL3 223 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 C2orf91Q6ZV80 131 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 FAM19A2Q8N3H0 131 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 WFDC11Q8NEX6 87 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 OR10X1Q8NGY0 326 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 H1FXQ92522 213 aaKnown RBP2.41□□□□□ -2.02
CHD9-218ENST00000566029 PROCRQ9UNN8 238 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 PSG8Q9UQ74 426 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 IGKV1-12A0A0C4DH73 117 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 A0A1W2PQM1 296 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 IGKV1D-12P01611 117 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 VDAC1P21796 283 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 ZNF441Q8N8Z8 693 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 TEX45Q8NA69 505 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 C18orf15Q96N68 181 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 SCRT2Q9NQ03 307 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 KNL1Q8NG31 2342 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 NDUFS5O43920 106 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 CR1LQ2VPA4 569 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 C15orf53Q8NAA6 179 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 TMEM101Q96IK0 257 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 SPRY1O43609 319 aaPredicted RBP2.41□□□□□ -2.02
CHD9-218ENST00000566029 LYZL6O75951 148 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 PDE6GP18545 87 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 CRYGSP22914 178 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 VMA21Q3ZAQ7 101 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 C10orf128Q5T292 105 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 H1FNTQ75WM6 255 aaPredicted RBP2.41□□□□□ -2.02
CHD9-218ENST00000566029 ERG28Q9UKR5 140 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 CACNA1GO43497 2377 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 RTTNQ86VV8 2226 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 A0A1W2PRX2 142 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 SHISA6Q6ZSJ9 500 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 VSIG2Q96IQ7 327 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 ZNF257Q9Y2Q1 563 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 SPTA1P02549 2419 aa2.41□□□□□ -2.02
CHD9-218ENST00000566029 SMCHD1A6NHR9 2005 aa2.4□□□□□ -2.02
CHD9-218ENST00000566029 A0A1W2PQF6 199 aa2.4□□□□□ -2.02
CHD9-218ENST00000566029 NDUFA7O95182 113 aa2.4□□□□□ -2.02
CHD9-218ENST00000566029 IGLV2-8P01709 118 aa2.4□□□□□ -2.02
CHD9-218ENST00000566029 NHLRC4P0CG21 123 aaPredicted RBP2.4□□□□□ -2.02
CHD9-218ENST00000566029 CX3CL1P78423 397 aa2.4□□□□□ -2.02
CHD9-218ENST00000566029 PRB3Q04118 309 aaPredicted RBP2.4□□□□□ -2.02
CHD9-218ENST00000566029 RSPO1Q2MKA7 263 aaPredicted RBP2.4□□□□□ -2.02
CHD9-218ENST00000566029 RBPMS2Q6ZRY4 209 aaKnown RBP2.4□□□□□ -2.02
CHD9-218ENST00000566029 LRRK1Q38SD2 2015 aa2.4□□□□□ -2.02
CHD9-218ENST00000566029 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.4□□□□□ -2.02
CHD9-218ENST00000566029 PSCAO43653 123 aa2.4□□□□□ -2.02
CHD9-218ENST00000566029 AMY1AP04745 511 aa2.4□□□□□ -2.02
CHD9-218ENST00000566029 C1orf195Q5TG92 126 aa2.4□□□□□ -2.02
CHD9-218ENST00000566029 VKORC1L1Q8N0U8 176 aa2.4□□□□□ -2.02
CHD9-218ENST00000566029 THAP8Q8NA92 274 aa2.4□□□□□ -2.02
CHD9-218ENST00000566029 GLMPQ8WWB7 406 aa2.4□□□□□ -2.02
CHD9-218ENST00000566029 ZC2HC1AQ96GY0 325 aa2.4□□□□□ -2.02
CHD9-218ENST00000566029 TMEM167BQ9NRX6 74 aa2.4□□□□□ -2.02
CHD9-218ENST00000566029 ARHGAP32A7KAX9 2087 aa2.4□□□□□ -2.02
CHD9-218ENST00000566029 A0A1W2PP55 124 aa2.4□□□□□ -2.02
CHD9-218ENST00000566029 TFF3Q07654 80 aa2.4□□□□□ -2.02
CHD9-218ENST00000566029 GAGE12HA6NDE8 117 aa2.4□□□□□ -2.03
CHD9-218ENST00000566029 KISS1Q15726 138 aa2.4□□□□□ -2.03
CHD9-218ENST00000566029 TNFRSF19Q9NS68 423 aa2.4□□□□□ -2.03
CHD9-218ENST00000566029 A0A087X002 238 aa2.4□□□□□ -2.03
CHD9-218ENST00000566029 LMO7DNF2Z398 122 aa2.4□□□□□ -2.03
CHD9-218ENST00000566029 CST6Q15828 149 aa2.4□□□□□ -2.03
CHD9-218ENST00000566029 TNFRSF18Q9Y5U5 241 aa2.4□□□□□ -2.03
CHD9-218ENST00000566029 M0R3E3 92 aa2.4□□□□□ -2.03
CHD9-218ENST00000566029 SAA1P0DJI8 122 aaPredicted RBP2.4□□□□□ -2.03
CHD9-218ENST00000566029 OR9G4Q8NGQ1 327 aa2.4□□□□□ -2.03
CHD9-218ENST00000566029 HS3ST6Q96QI5 342 aa2.4□□□□□ -2.03
CHD9-218ENST00000566029 X6R8D5 127 aa2.4□□□□□ -2.03
CHD9-218ENST00000566029 PLXNB3Q9ULL4 1909 aa2.4□□□□□ -2.03
CHD9-218ENST00000566029 CPAMD8Q8IZJ3 1885 aa2.4□□□□□ -2.03
CHD9-218ENST00000566029 SPAARA0A1B0GVQ0 90 aa2.4□□□□□ -2.03
CHD9-218ENST00000566029 hADV38S2A0JD32 116 aa2.4□□□□□ -2.03
CHD9-218ENST00000566029 GCHFRP30047 84 aa2.4□□□□□ -2.03
CHD9-218ENST00000566029 FXYD3Q14802 87 aa2.4□□□□□ -2.03
CHD9-218ENST00000566029 KIR3DS1Q14943 382 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms