RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 LHFPL5Q8TAF8 219 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 FAM168AQ92567 244 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 PAXXQ9BUH6 204 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 GEMIN7Q9H840 131 aaKnown RBP2.78□□□□□ -1.96
CHD9-213ENST00000564845 TRAV14DV4A0A0A6YYC5 116 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 PRSS1P07477 247 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 ADIPOQQ15848 244 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 DRAM1Q8N682 238 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 BLNKQ8WV28 456 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 TMUB1Q9BVT8 246 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 C1QTNF5Q9BXJ0 243 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 MRPL18Q9H0U6 180 aaKnown RBP2.78□□□□□ -1.96
CHD9-213ENST00000564845 MS4A6AQ9H2W1 248 aa2.78□□□□□ -1.96
CHD9-213ENST00000564845 AKAP6Q13023 2319 aa2.78□□□□□ -1.97
CHD9-213ENST00000564845 NAPSAO96009 420 aa2.78□□□□□ -1.97
CHD9-213ENST00000564845 RTP5Q14D33 572 aa2.78□□□□□ -1.97
CHD9-213ENST00000564845 ZNF818PQ6ZRF7 136 aa2.78□□□□□ -1.97
CHD9-213ENST00000564845 ST6GALNAC3Q8NDV1 305 aa2.78□□□□□ -1.97
CHD9-213ENST00000564845 SGMS2Q8NHU3 365 aa2.78□□□□□ -1.97
CHD9-213ENST00000564845 SSBP3Q9BWW4 388 aaPredicted RBP2.78□□□□□ -1.97
CHD9-213ENST00000564845 ZNF430Q9H8G1 570 aaPredicted RBP2.78□□□□□ -1.97
CHD9-213ENST00000564845 CCL28Q9NRJ3 127 aa2.78□□□□□ -1.97
CHD9-213ENST00000564845 SHANK1Q9Y566 2161 aa2.78□□□□□ -1.97
CHD9-213ENST00000564845 LRRK2Q5S007 2527 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 PKD1L1Q8TDX9 2849 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 MOB3BQ86TA1 216 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 CCL17Q92583 94 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 ZC2HC1AQ96GY0 325 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 RNF224P0DH78 156 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 SCGB1A1P11684 91 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 IBA57Q5T440 356 aaKnown RBP2.77□□□□□ -1.97
CHD9-213ENST00000564845 SPANXN1Q5VSR9 72 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 OR4C5Q8NGB2 326 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 PHLDA1Q8WV24 401 aaPredicted RBP2.77□□□□□ -1.97
CHD9-213ENST00000564845 RARRES2Q99969 163 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 OR11H12B2RN74 326 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 H0YIZ8 118 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 FCGR2CP31995 323 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 LPAR6P43657 344 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 ZNF585BQ52M93 769 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 OR11H1Q8NG94 326 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 OR11H2Q8NH07 326 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 H1FXQ92522 213 aaKnown RBP2.77□□□□□ -1.97
CHD9-213ENST00000564845 MRPL27Q9P0M9 148 aaKnown RBP2.77□□□□□ -1.97
CHD9-213ENST00000564845 DPM3Q9P2X0 92 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 ONECUT1Q9UBC0 465 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 PKD1L2Q7Z442 2459 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 IGHV3-35A0A0C4DH35 117 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 PSPNO60542 156 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 SFTA3P0C7M3 94 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 C8orf88P0DMB2 117 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 CNTFRP26992 372 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 OR2H1Q9GZK4 316 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 GSN-AS1Q9NRJ2 163 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 FGF16O43320 207 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 IL4P05112 153 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 ZNF708P17019 499 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 DYNLT3P51808 116 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 HSPE1P61604 102 aaKnown RBP2.77□□□□□ -1.97
CHD9-213ENST00000564845 SUPT4H1P63272 117 aaKnown RBP2.77□□□□□ -1.97
CHD9-213ENST00000564845 SRSF1Q07955 248 aaKnown RBP eCLIP2.77□□□□□ -1.97
CHD9-213ENST00000564845 LCN12Q6JVE5 192 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 SLC25A47Q6Q0C1 308 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 ERRFI1Q9UJM3 462 aaPredicted RBP2.77□□□□□ -1.97
CHD9-213ENST00000564845 C9orf170A2RU37 121 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 A8MWV9 139 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 H3BTX0 84 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 ZNF253O75346 499 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 HYPMO75409 117 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 MMP23AO75900 390 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 REG1AP05451 166 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 CCL1P22362 96 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 TMEM144Q7Z5S9 345 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 EAF1Q96JC9 268 aaPredicted RBP2.77□□□□□ -1.97
CHD9-213ENST00000564845 PRADC1Q9BSG0 188 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 VSIRQ9H7M9 311 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 DNAJC4Q9NNZ3 241 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 CREBBPQ92793 2442 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 A0A1B0GUT8 65 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 ZNF737O75373 536 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 GATA2P23769 480 aaPredicted RBP2.77□□□□□ -1.97
CHD9-213ENST00000564845 TMEM136Q6ZRR5 245 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 ANK2Q01484 3957 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 NCOA6Q14686 2063 aaPredicted RBP2.77□□□□□ -1.97
CHD9-213ENST00000564845 LYSTQ99698 3801 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 TRBV5-5A0A0J9YX44 114 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 M0R2Z0 102 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 PRSS2P07478 247 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 Q1RN00 199 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 TUSC1Q2TAM9 212 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 C19orf54Q5BKX5 351 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 RUSC1-AS1Q66K80 236 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 SEM1Q6ZVN7 128 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 ORMDL3Q8N138 153 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 RTBDNQ9BSG5 229 aaPredicted RBP2.77□□□□□ -1.97
CHD9-213ENST00000564845 CACNA1DQ01668 2161 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 PPIHO43447 177 aaKnown RBP2.77□□□□□ -1.97
CHD9-213ENST00000564845 GPX1P07203 203 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 FOXL1Q12952 345 aa2.77□□□□□ -1.97
CHD9-213ENST00000564845 C14orf177Q52M58 125 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms