RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 TRGV3P03979 118 aa12.13□□□□□ -0.47
COMMD4-210ENST00000564587 IL4P05112 153 aa12.13□□□□□ -0.47
COMMD4-210ENST00000564587 SRP14P37108 136 aaKnown RBP12.13□□□□□ -0.47
COMMD4-210ENST00000564587 RELQ04864 619 aaPredicted RBP12.13□□□□□ -0.47
COMMD4-210ENST00000564587 RPUSD4Q96CM3 377 aaKnown RBP12.13□□□□□ -0.47
COMMD4-210ENST00000564587 SMIM7Q9BQ49 75 aa12.13□□□□□ -0.47
COMMD4-210ENST00000564587 SHANK2-AS3Q9BTD1 123 aa12.13□□□□□ -0.47
COMMD4-210ENST00000564587 TACC2O95359 2948 aa12.13□□□□□ -0.47
COMMD4-210ENST00000564587 TRAV5A0A0B4J249 113 aa12.12□□□□□ -0.47
COMMD4-210ENST00000564587 OR2T8A6NH00 312 aa12.12□□□□□ -0.47
COMMD4-210ENST00000564587 H3BRN7 92 aa12.12□□□□□ -0.47
COMMD4-210ENST00000564587 ATP5G3P48201 142 aa12.12□□□□□ -0.47
COMMD4-210ENST00000564587 RAB9AP51151 201 aa12.12□□□□□ -0.47
COMMD4-210ENST00000564587 BTN1A1Q13410 526 aa12.12□□□□□ -0.47
COMMD4-210ENST00000564587 TMEM241Q24JQ0 296 aa12.12□□□□□ -0.47
COMMD4-210ENST00000564587 KRTAP21-3Q3LHN1 58 aa12.12□□□□□ -0.47
COMMD4-210ENST00000564587 AWAT1Q58HT5 328 aa12.12□□□□□ -0.47
COMMD4-210ENST00000564587 C11orf52Q96A22 123 aa12.12□□□□□ -0.47
COMMD4-210ENST00000564587 MS4A10Q96PG2 267 aa12.12□□□□□ -0.47
COMMD4-210ENST00000564587 YTHDF2Q9Y5A9 579 aaKnown RBP12.12□□□□□ -0.47
COMMD4-210ENST00000564587 S4R3C0 116 aa12.12□□□□□ -0.47
COMMD4-210ENST00000564587 APCP25054 2843 aa12.11□□□□□ -0.47
COMMD4-210ENST00000564587 C7orf77A4D0Y5 90 aa12.11□□□□□ -0.47
COMMD4-210ENST00000564587 BMPR1BO00238 502 aa12.11□□□□□ -0.47
COMMD4-210ENST00000564587 TGOLN2O43493 480 aa12.11□□□□□ -0.47
COMMD4-210ENST00000564587 CLEC3BP05452 202 aa12.11□□□□□ -0.47
COMMD4-210ENST00000564587 OR10J4P0C629 311 aa12.11□□□□□ -0.47
COMMD4-210ENST00000564587 GPR183P32249 361 aa12.11□□□□□ -0.47
COMMD4-210ENST00000564587 TPPP2P59282 170 aa12.11□□□□□ -0.47
COMMD4-210ENST00000564587 MORN5Q5VZ52 161 aa12.11□□□□□ -0.47
COMMD4-210ENST00000564587 BPIFA4PQ86YQ2 179 aa12.11□□□□□ -0.47
COMMD4-210ENST00000564587 FXYD5Q96DB9 178 aa12.11□□□□□ -0.47
COMMD4-210ENST00000564587 PARLQ9H300 379 aa12.11□□□□□ -0.47
COMMD4-210ENST00000564587 SDF2L1Q9HCN8 221 aa12.11□□□□□ -0.47
COMMD4-210ENST00000564587 RPS10P5Q9NQ39 176 aa12.11□□□□□ -0.47
COMMD4-210ENST00000564587 SMCO4Q9NRQ5 59 aa12.11□□□□□ -0.47
COMMD4-210ENST00000564587 TMEM160Q9NX00 188 aa12.11□□□□□ -0.47
COMMD4-210ENST00000564587 F8P00451 2351 aa12.1□□□□□ -0.47
COMMD4-210ENST00000564587 A0A087WWC5 75 aa12.1□□□□□ -0.47
COMMD4-210ENST00000564587 HOXA3O43365 443 aaPredicted RBP12.1□□□□□ -0.47
COMMD4-210ENST00000564587 IGLV1-40P01703 118 aa12.1□□□□□ -0.47
COMMD4-210ENST00000564587 NBEAP1P0C6P0 100 aa12.1□□□□□ -0.47
COMMD4-210ENST00000564587 HIST1H1EP10412 219 aaKnown RBP12.1□□□□□ -0.47
COMMD4-210ENST00000564587 SLC35B1P78383 322 aa12.1□□□□□ -0.47
COMMD4-210ENST00000564587 CFHR3Q02985 330 aa12.1□□□□□ -0.47
COMMD4-210ENST00000564587 TUBA4BQ9H853 241 aa12.1□□□□□ -0.47
COMMD4-210ENST00000564587 YAE1D1Q9NRH1 226 aa12.1□□□□□ -0.47
COMMD4-210ENST00000564587 RABAC1Q9UI14 185 aa12.1□□□□□ -0.47
COMMD4-210ENST00000564587 IGHV3-23P01764 117 aa12.09□□□□□ -0.47
COMMD4-210ENST00000564587 PF4V1P10720 104 aa12.09□□□□□ -0.47
COMMD4-210ENST00000564587 GP9P14770 177 aa12.09□□□□□ -0.47
COMMD4-210ENST00000564587 ADMP35318 185 aa12.09□□□□□ -0.47
COMMD4-210ENST00000564587 ZNF674Q2M3X9 581 aa12.09□□□□□ -0.47
COMMD4-210ENST00000564587 CLEC19AQ6UXS0 136 aa12.09□□□□□ -0.47
COMMD4-210ENST00000564587 SIGLECL1Q8N7X8 197 aa12.09□□□□□ -0.47
COMMD4-210ENST00000564587 OR4F17Q8NGA8 305 aa12.09□□□□□ -0.47
COMMD4-210ENST00000564587 CCDC140Q96MF4 163 aa12.09□□□□□ -0.47
COMMD4-210ENST00000564587 CHRDL1Q9BU40 450 aa12.09□□□□□ -0.47
COMMD4-210ENST00000564587 LINC00527Q9UJ94 153 aa12.09□□□□□ -0.47
COMMD4-210ENST00000564587 PDZD2O15018 2839 aa12.09□□□□□ -0.47
COMMD4-210ENST00000564587 ZNF98A6NK75 572 aa12.08□□□□□ -0.48
COMMD4-210ENST00000564587 DNASE2O00115 360 aaPredicted RBP12.08□□□□□ -0.48
COMMD4-210ENST00000564587 NDUFB4O95168 129 aa12.08□□□□□ -0.48
COMMD4-210ENST00000564587 IGHG4P01861 327 aa12.08□□□□□ -0.48
COMMD4-210ENST00000564587 PYYP10082 97 aa12.08□□□□□ -0.48
COMMD4-210ENST00000564587 SUMO1P63165 101 aaKnown RBP12.08□□□□□ -0.48
COMMD4-210ENST00000564587 KRTAP1-1Q07627 177 aa12.08□□□□□ -0.48
COMMD4-210ENST00000564587 KIAA0141Q14154 515 aaPredicted RBP12.08□□□□□ -0.48
COMMD4-210ENST00000564587 ZNF343Q6P1L6 599 aa12.08□□□□□ -0.48
COMMD4-210ENST00000564587 NOL4LQ96MY1 436 aaPredicted RBP12.08□□□□□ -0.48
COMMD4-210ENST00000564587 LY96Q9Y6Y9 160 aa12.08□□□□□ -0.48
COMMD4-210ENST00000564587 DNHD1Q96M86 4753 aa12.07□□□□□ -0.48
COMMD4-210ENST00000564587 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.07□□□□□ -0.48
COMMD4-210ENST00000564587 C9JCJ5 164 aa12.07□□□□□ -0.48
COMMD4-210ENST00000564587 RPL7P18124 248 aaKnown RBP12.07□□□□□ -0.48
COMMD4-210ENST00000564587 USF2Q15853 346 aaPredicted RBP12.07□□□□□ -0.48
COMMD4-210ENST00000564587 TOMM20LQ6UXN7 152 aa12.07□□□□□ -0.48
COMMD4-210ENST00000564587 Q8N2B8 174 aa12.07□□□□□ -0.48
COMMD4-210ENST00000564587 LYPD1Q8N2G4 141 aa12.07□□□□□ -0.48
COMMD4-210ENST00000564587 HIST1H2BAQ96A08 127 aa12.07□□□□□ -0.48
COMMD4-210ENST00000564587 GPR82Q96P67 336 aa12.07□□□□□ -0.48
COMMD4-210ENST00000564587 C20orf24Q9BUV8 137 aa12.07□□□□□ -0.48
COMMD4-210ENST00000564587 CTDSP1Q9GZU7 261 aa12.07□□□□□ -0.48
COMMD4-210ENST00000564587 GNB4Q9HAV0 340 aa12.07□□□□□ -0.48
COMMD4-210ENST00000564587 TMEM242Q9NWH2 141 aa12.07□□□□□ -0.48
COMMD4-210ENST00000564587 SCO2A0A1W2PP80 73 aa12.06□□□□□ -0.48
COMMD4-210ENST00000564587 CXorf65A6NEN9 183 aa12.06□□□□□ -0.48
COMMD4-210ENST00000564587 ELANEP08246 267 aa12.06□□□□□ -0.48
COMMD4-210ENST00000564587 NPPCP23582 126 aa12.06□□□□□ -0.48
COMMD4-210ENST00000564587 ARL3P36405 182 aa12.06□□□□□ -0.48
COMMD4-210ENST00000564587 PDE6HQ13956 83 aa12.06□□□□□ -0.48
COMMD4-210ENST00000564587 Q6ZS46 218 aa12.06□□□□□ -0.48
COMMD4-210ENST00000564587 HELTA6NFD8 242 aa12.05□□□□□ -0.48
COMMD4-210ENST00000564587 GGTLC3B5MD39 225 aa12.05□□□□□ -0.48
COMMD4-210ENST00000564587 MT-ND4LP03901 98 aa12.05□□□□□ -0.48
COMMD4-210ENST00000564587 S100A9P06702 114 aaKnown RBP12.05□□□□□ -0.48
COMMD4-210ENST00000564587 MYCNOSP40205 109 aa12.05□□□□□ -0.48
COMMD4-210ENST00000564587 TAS2R60P59551 318 aa12.05□□□□□ -0.48
COMMD4-210ENST00000564587 C1orf194Q5T5A4 169 aa12.05□□□□□ -0.48
COMMD4-210ENST00000564587 TEX38Q6PEX7 206 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms