RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 TNRC6AQ8NDV7 1962 aaKnown RBP8.49□□□□□ -1.05
RNF40-204ENST00000563683 SMIM27A0A1W2PRY6 76 aa8.49□□□□□ -1.05
RNF40-204ENST00000563683 LDLRAD2Q5SZI1 272 aa8.49□□□□□ -1.05
RNF40-204ENST00000563683 LCN12Q6JVE5 192 aa8.49□□□□□ -1.05
RNF40-204ENST00000563683 C12orf54Q6X4T0 127 aa8.49□□□□□ -1.05
RNF40-204ENST00000563683 C18orf32Q8TCD1 76 aa8.49□□□□□ -1.05
RNF40-204ENST00000563683 CLEC5AQ9NY25 188 aa8.49□□□□□ -1.05
RNF40-204ENST00000563683 C1RLQ9NZP8 487 aa8.49□□□□□ -1.05
RNF40-204ENST00000563683 LOC389332A0A1B0GUA5 103 aa8.48□□□□□ -1.05
RNF40-204ENST00000563683 CGB1A6NKQ9 187 aa8.48□□□□□ -1.05
RNF40-204ENST00000563683 H0YJW9 148 aa8.48□□□□□ -1.05
RNF40-204ENST00000563683 TCTAP57738 103 aa8.48□□□□□ -1.05
RNF40-204ENST00000563683 LOXL3P58215 753 aa8.48□□□□□ -1.05
RNF40-204ENST00000563683 SCGB2A2Q13296 93 aa8.48□□□□□ -1.05
RNF40-204ENST00000563683 PET117Q6UWS5 81 aa8.48□□□□□ -1.05
RNF40-204ENST00000563683 ST20Q9HBF5 79 aa8.48□□□□□ -1.05
RNF40-204ENST00000563683 IGLL1P15814 213 aa8.48□□□□□ -1.05
RNF40-204ENST00000563683 TBR1Q16650 682 aa8.48□□□□□ -1.05
RNF40-204ENST00000563683 C2orf83Q53S99 150 aa8.48□□□□□ -1.05
RNF40-204ENST00000563683 PIP4P1Q86T03 277 aa8.48□□□□□ -1.05
RNF40-204ENST00000563683 FAM169BQ8N8A8 192 aa8.48□□□□□ -1.05
RNF40-204ENST00000563683 DPM3Q9P2X0 92 aa8.48□□□□□ -1.05
RNF40-204ENST00000563683 RNF24Q9Y225 148 aa8.48□□□□□ -1.05
RNF40-204ENST00000563683 A0A1W2PRE2 83 aa8.48□□□□□ -1.05
RNF40-204ENST00000563683 TCRBV4S1A1TA0A5B7 111 aa8.48□□□□□ -1.05
RNF40-204ENST00000563683 SRRM4A7MD48 611 aaKnown RBP8.48□□□□□ -1.05
RNF40-204ENST00000563683 OR5AL1P0C617 328 aa8.48□□□□□ -1.05
RNF40-204ENST00000563683 MAJINQ3KP22 176 aa8.48□□□□□ -1.05
RNF40-204ENST00000563683 CCDC144NLQ6NUI1 221 aa8.48□□□□□ -1.05
RNF40-204ENST00000563683 C5orf30Q96GV9 206 aa8.48□□□□□ -1.05
RNF40-204ENST00000563683 MUC21A0A0G2JKD1 596 aa8.47□□□□□ -1.05
RNF40-204ENST00000563683 MUC21A0A140T8X8 626 aa8.47□□□□□ -1.05
RNF40-204ENST00000563683 HIGD1CA8MV81 97 aa8.47□□□□□ -1.05
RNF40-204ENST00000563683 IGHV1-8P0DP01 117 aa8.47□□□□□ -1.05
RNF40-204ENST00000563683 BRWD1-AS2P59051 145 aa8.47□□□□□ -1.05
RNF40-204ENST00000563683 MSMPQ1L6U9 139 aa8.47□□□□□ -1.05
RNF40-204ENST00000563683 MUC21Q5SSG8 566 aa8.47□□□□□ -1.05
RNF40-204ENST00000563683 TCF24Q7RTU0 167 aa8.47□□□□□ -1.05
RNF40-204ENST00000563683 WIPF2Q8TF74 440 aaPredicted RBP8.47□□□□□ -1.05
RNF40-204ENST00000563683 SMIM12Q96EX1 92 aa8.47□□□□□ -1.05
RNF40-204ENST00000563683 TMEM70Q9BUB7 260 aa8.47□□□□□ -1.05
RNF40-204ENST00000563683 LSM4Q9Y4Z0 139 aaKnown RBP8.47□□□□□ -1.05
RNF40-204ENST00000563683 RNASE2P10153 161 aaKnown RBP8.47□□□□□ -1.05
RNF40-204ENST00000563683 NHLH1Q02575 133 aa8.47□□□□□ -1.05
RNF40-204ENST00000563683 KLRB1Q12918 225 aa8.47□□□□□ -1.05
RNF40-204ENST00000563683 RIGQ13278 110 aa8.47□□□□□ -1.05
RNF40-204ENST00000563683 TMEM14BQ9NUH8 114 aa8.47□□□□□ -1.05
RNF40-204ENST00000563683 KIAA1549Q9HCM3 1950 aa8.47□□□□□ -1.05
RNF40-204ENST00000563683 M0QZ24 198 aa8.47□□□□□ -1.05
RNF40-204ENST00000563683 S100A4P26447 101 aaKnown RBP8.47□□□□□ -1.05
RNF40-204ENST00000563683 CA7P43166 264 aa8.47□□□□□ -1.05
RNF40-204ENST00000563683 DIAPH2-AS1Q14236 149 aa8.47□□□□□ -1.05
RNF40-204ENST00000563683 KHDC1LQ5JSQ8 128 aa8.47□□□□□ -1.05
RNF40-204ENST00000563683 EYSQ5T1H1 3165 aa8.46□□□□□ -1.05
RNF40-204ENST00000563683 TNRC6BQ9UPQ9 1833 aaKnown RBP8.46□□□□□ -1.05
RNF40-204ENST00000563683 IGHV3OR16-10A0A075B7F0 116 aa8.46□□□□□ -1.05
RNF40-204ENST00000563683 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.46□□□□□ -1.05
RNF40-204ENST00000563683 KLF5Q13887 457 aaPredicted RBP8.46□□□□□ -1.05
RNF40-204ENST00000563683 VPS13AQ96RL7 3174 aa8.46□□□□□ -1.05
RNF40-204ENST00000563683 OR2J3O76001 311 aa8.46□□□□□ -1.06
RNF40-204ENST00000563683 CFHR2P36980 270 aa8.46□□□□□ -1.06
RNF40-204ENST00000563683 KLF17Q5JT82 389 aaPredicted RBP8.46□□□□□ -1.06
RNF40-204ENST00000563683 IGLV3-9A0A075B6K5 115 aa8.46□□□□□ -1.06
RNF40-204ENST00000563683 IGHV3-49A0A0A0MS15 119 aa8.46□□□□□ -1.06
RNF40-204ENST00000563683 TIMM23O14925 209 aa8.46□□□□□ -1.06
RNF40-204ENST00000563683 MFAP4P55083 255 aa8.46□□□□□ -1.06
RNF40-204ENST00000563683 ASPHD1Q5U4P2 390 aa8.46□□□□□ -1.06
RNF40-204ENST00000563683 SLC25A34Q6PIV7 304 aa8.46□□□□□ -1.06
RNF40-204ENST00000563683 Q9H3A6 140 aa8.46□□□□□ -1.06
RNF40-204ENST00000563683 ANKRD11Q6UB99 2663 aaPredicted RBP8.46□□□□□ -1.06
RNF40-204ENST00000563683 MPV17L2Q567V2 206 aa8.45□□□□□ -1.06
RNF40-204ENST00000563683 SEM1Q6ZVN7 128 aa8.45□□□□□ -1.06
RNF40-204ENST00000563683 CSTL1Q9H114 145 aa8.45□□□□□ -1.06
RNF40-204ENST00000563683 NOTCH2Q04721 2471 aa8.45□□□□□ -1.06
RNF40-204ENST00000563683 PRSS46E5RG02 174 aa8.45□□□□□ -1.06
RNF40-204ENST00000563683 E7EQL1 145 aa8.45□□□□□ -1.06
RNF40-204ENST00000563683 COL8A2P25067 703 aa8.45□□□□□ -1.06
RNF40-204ENST00000563683 ZNF672Q499Z4 452 aaPredicted RBP8.45□□□□□ -1.06
RNF40-204ENST00000563683 OR8A1Q8NGG7 326 aa8.45□□□□□ -1.06
RNF40-204ENST00000563683 GPR82Q96P67 336 aa8.45□□□□□ -1.06
RNF40-204ENST00000563683 EPDR1Q9UM22 224 aa8.45□□□□□ -1.06
RNF40-204ENST00000563683 OR4C46A6NHA9 309 aa8.45□□□□□ -1.06
RNF40-204ENST00000563683 NUDT3O95989 172 aa8.45□□□□□ -1.06
RNF40-204ENST00000563683 SLAQ13239 276 aa8.45□□□□□ -1.06
RNF40-204ENST00000563683 EBLN2Q6P2I7 272 aa8.45□□□□□ -1.06
RNF40-204ENST00000563683 TMEM167AQ8TBQ9 72 aa8.45□□□□□ -1.06
RNF40-204ENST00000563683 TMEM191AQ9H0A3 160 aa8.45□□□□□ -1.06
RNF40-204ENST00000563683 LEPROTL1O95214 131 aa8.44□□□□□ -1.06
RNF40-204ENST00000563683 PSG1P11464 419 aa8.44□□□□□ -1.06
RNF40-204ENST00000563683 GATA4P43694 442 aa8.44□□□□□ -1.06
RNF40-204ENST00000563683 IGFL3Q6UXB1 125 aa8.44□□□□□ -1.06
RNF40-204ENST00000563683 DEFB125Q8N687 156 aa8.44□□□□□ -1.06
RNF40-204ENST00000563683 NUP37Q8NFH4 326 aa8.44□□□□□ -1.06
RNF40-204ENST00000563683 VKORC1Q9BQB6 163 aa8.44□□□□□ -1.06
RNF40-204ENST00000563683 ADAMTS20P59510 1910 aa8.44□□□□□ -1.06
RNF40-204ENST00000563683 FNDC10F2Z333 226 aa8.44□□□□□ -1.06
RNF40-204ENST00000563683 SPOCK3Q9BQ16 436 aa8.44□□□□□ -1.06
RNF40-204ENST00000563683 MAP1LC3CQ9BXW4 147 aa8.44□□□□□ -1.06
RNF40-204ENST00000563683 UFC1Q9Y3C8 167 aa8.44□□□□□ -1.06
RNF40-204ENST00000563683 CSPG4Q6UVK1 2322 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms