RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 LCN12Q6JVE5 192 aa9.21□□□□□ -0.94
RPAP1-204ENST00000562303 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.21□□□□□ -0.94
RPAP1-204ENST00000562303 PSPNO60542 156 aa9.21□□□□□ -0.94
RPAP1-204ENST00000562303 SH2D1AO60880 128 aa9.21□□□□□ -0.94
RPAP1-204ENST00000562303 TBX6O95947 436 aaPredicted RBP9.21□□□□□ -0.94
RPAP1-204ENST00000562303 SAA4P35542 130 aa9.21□□□□□ -0.94
RPAP1-204ENST00000562303 GGTLC1Q9BX51 225 aa9.21□□□□□ -0.94
RPAP1-204ENST00000562303 F5H768 121 aa9.2□□□□□ -0.94
RPAP1-204ENST00000562303 MAPK1IP1LQ8NDC0 245 aa9.2□□□□□ -0.94
RPAP1-204ENST00000562303 TNFSF13O75888 250 aa9.2□□□□□ -0.94
RPAP1-204ENST00000562303 LGALS1P09382 135 aaKnown RBP9.2□□□□□ -0.94
RPAP1-204ENST00000562303 GATA4P43694 442 aa9.2□□□□□ -0.94
RPAP1-204ENST00000562303 C14orf178Q8N769 122 aaPredicted RBP9.2□□□□□ -0.94
RPAP1-204ENST00000562303 CSTL1Q9H114 145 aa9.2□□□□□ -0.94
RPAP1-204ENST00000562303 OVOL3O00110 214 aa9.2□□□□□ -0.94
RPAP1-204ENST00000562303 EFNA2O43921 213 aa9.2□□□□□ -0.94
RPAP1-204ENST00000562303 DEFB131AP59861 70 aa9.2□□□□□ -0.94
RPAP1-204ENST00000562303 PRR31Q5SQ13 230 aa9.2□□□□□ -0.94
RPAP1-204ENST00000562303 ZNF479Q96JC4 524 aa9.2□□□□□ -0.94
RPAP1-204ENST00000562303 WFDC1Q9HC57 220 aa9.2□□□□□ -0.94
RPAP1-204ENST00000562303 RTTNQ86VV8 2226 aa9.2□□□□□ -0.94
RPAP1-204ENST00000562303 TRAV3A0A0B4J244 114 aa9.2□□□□□ -0.94
RPAP1-204ENST00000562303 RUSC1-AS1Q66K80 236 aa9.2□□□□□ -0.94
RPAP1-204ENST00000562303 CACNA1GO43497 2377 aa9.2□□□□□ -0.94
RPAP1-204ENST00000562303 TRIOBPQ9H2D6 2365 aa9.2□□□□□ -0.94
RPAP1-204ENST00000562303 CGB3P0DN86 165 aa9.2□□□□□ -0.94
RPAP1-204ENST00000562303 NABP1Q96AH0 204 aa9.2□□□□□ -0.94
RPAP1-204ENST00000562303 Q96MF0 132 aa9.2□□□□□ -0.94
RPAP1-204ENST00000562303 MSRB2Q9Y3D2 182 aa9.2□□□□□ -0.94
RPAP1-204ENST00000562303 NDUFS8O00217 210 aa9.19□□□□□ -0.94
RPAP1-204ENST00000562303 LYPD3O95274 346 aa9.19□□□□□ -0.94
RPAP1-204ENST00000562303 PCP4P48539 62 aa9.19□□□□□ -0.94
RPAP1-204ENST00000562303 DAD1P61803 113 aa9.19□□□□□ -0.94
RPAP1-204ENST00000562303 TMEM190Q8WZ59 177 aa9.19□□□□□ -0.94
RPAP1-204ENST00000562303 DAZ1Q9NQZ3 744 aaKnown RBP9.19□□□□□ -0.94
RPAP1-204ENST00000562303 A0A087WWL8 130 aa9.19□□□□□ -0.94
RPAP1-204ENST00000562303 MBD3L4A6NDZ8 208 aaPredicted RBP9.19□□□□□ -0.94
RPAP1-204ENST00000562303 MBD3L3A6NE82 208 aaPredicted RBP9.19□□□□□ -0.94
RPAP1-204ENST00000562303 MBD3L5A6NJ08 208 aaPredicted RBP9.19□□□□□ -0.94
RPAP1-204ENST00000562303 LYPD2Q6UXB3 125 aa9.19□□□□□ -0.94
RPAP1-204ENST00000562303 MBD3L2Q8NHZ7 208 aaPredicted RBP9.19□□□□□ -0.94
RPAP1-204ENST00000562303 SCN8AQ9UQD0 1980 aa9.19□□□□□ -0.94
RPAP1-204ENST00000562303 VWC2LB2RUY7 222 aa9.19□□□□□ -0.94
RPAP1-204ENST00000562303 LEPROTO15243 131 aa9.19□□□□□ -0.94
RPAP1-204ENST00000562303 MSMBP08118 114 aa9.19□□□□□ -0.94
RPAP1-204ENST00000562303 SRSF4Q08170 494 aaKnown RBP9.19□□□□□ -0.94
RPAP1-204ENST00000562303 MDS2Q8NDY4 140 aa9.19□□□□□ -0.94
RPAP1-204ENST00000562303 Q71RC1 249 aaPredicted RBP9.19□□□□□ -0.94
RPAP1-204ENST00000562303 FAM110DQ8TAY7 271 aaPredicted RBP9.19□□□□□ -0.94
RPAP1-204ENST00000562303 SIGLEC9Q9Y336 463 aa9.19□□□□□ -0.94
RPAP1-204ENST00000562303 ESPL1Q14674 2120 aa9.19□□□□□ -0.94
RPAP1-204ENST00000562303 ITGB1BP1O14713 200 aa9.18□□□□□ -0.94
RPAP1-204ENST00000562303 EREGO14944 169 aa9.18□□□□□ -0.94
RPAP1-204ENST00000562303 OTOFQ9HC10 1997 aa9.18□□□□□ -0.94
RPAP1-204ENST00000562303 ZNF561-AS1K7EIQ3 104 aa9.18□□□□□ -0.94
RPAP1-204ENST00000562303 EDA2RQ9HAV5 297 aa9.18□□□□□ -0.94
RPAP1-204ENST00000562303 INTS1Q8N201 2190 aaKnown RBP9.18□□□□□ -0.94
RPAP1-204ENST00000562303 SPTBP11277 2137 aa9.18□□□□□ -0.94
RPAP1-204ENST00000562303 ZNF562Q6V9R5 426 aa9.18□□□□□ -0.94
RPAP1-204ENST00000562303 ZNF48Q96MX3 618 aaPredicted RBP9.18□□□□□ -0.94
RPAP1-204ENST00000562303 MGST2Q99735 147 aa9.18□□□□□ -0.94
RPAP1-204ENST00000562303 MTCL1Q9Y4B5 1905 aaKnown RBP9.18□□□□□ -0.94
RPAP1-204ENST00000562303 CFHR3Q02985 330 aa9.18□□□□□ -0.94
RPAP1-204ENST00000562303 PSG3Q16557 428 aa9.18□□□□□ -0.94
RPAP1-204ENST00000562303 LINC01559Q495D7 138 aa9.18□□□□□ -0.94
RPAP1-204ENST00000562303 Q6ZS92 163 aa9.18□□□□□ -0.94
RPAP1-204ENST00000562303 NEUROG3Q9Y4Z2 214 aa9.18□□□□□ -0.94
RPAP1-204ENST00000562303 A8MXK9 166 aa9.18□□□□□ -0.94
RPAP1-204ENST00000562303 E9PQ18 207 aa9.18□□□□□ -0.94
RPAP1-204ENST00000562303 HSD52Q0P140 79 aa9.18□□□□□ -0.94
RPAP1-204ENST00000562303 TMEM155Q4W5P6 130 aa9.18□□□□□ -0.94
RPAP1-204ENST00000562303 ZNF625Q96I27 306 aaPredicted RBP9.18□□□□□ -0.94
RPAP1-204ENST00000562303 IGKV1-27A0A075B6S5 117 aa9.17□□□□□ -0.94
RPAP1-204ENST00000562303 LINC01619G3V211 115 aa9.17□□□□□ -0.94
RPAP1-204ENST00000562303 CGB7P0DN87 165 aa9.17□□□□□ -0.94
RPAP1-204ENST00000562303 NR2C2APQ86WQ0 139 aa9.17□□□□□ -0.94
RPAP1-204ENST00000562303 XCL2Q9UBD3 114 aa9.17□□□□□ -0.94
RPAP1-204ENST00000562303 COL11A1P12107 1806 aaPredicted RBP9.17□□□□□ -0.94
RPAP1-204ENST00000562303 SRSF3P84103 164 aaKnown RBP9.17□□□□□ -0.94
RPAP1-204ENST00000562303 DMRTC2Q8IXT2 367 aaPredicted RBP9.17□□□□□ -0.94
RPAP1-204ENST00000562303 BMPERQ8N8U9 685 aa9.17□□□□□ -0.94
RPAP1-204ENST00000562303 MYMXA0A1B0GTQ4 84 aa9.17□□□□□ -0.94
RPAP1-204ENST00000562303 H0YIZ8 118 aa9.17□□□□□ -0.94
RPAP1-204ENST00000562303 GATA3P23771 443 aa9.17□□□□□ -0.94
RPAP1-204ENST00000562303 PRIMA1Q86XR5 153 aa9.17□□□□□ -0.94
RPAP1-204ENST00000562303 ARFGEF1Q9Y6D6 1849 aa9.17□□□□□ -0.94
RPAP1-204ENST00000562303 MST1P26927 711 aa9.17□□□□□ -0.94
RPAP1-204ENST00000562303 SSBP2P81877 361 aaPredicted RBP9.17□□□□□ -0.94
RPAP1-204ENST00000562303 SAMD5Q5TGI4 173 aa9.17□□□□□ -0.94
RPAP1-204ENST00000562303 RASL11AQ6T310 242 aa9.17□□□□□ -0.94
RPAP1-204ENST00000562303 EP300Q09472 2414 aaPredicted RBP9.16□□□□□ -0.94
RPAP1-204ENST00000562303 J3QKU1 62 aa9.16□□□□□ -0.94
RPAP1-204ENST00000562303 HAPLN4Q86UW8 402 aa9.16□□□□□ -0.94
RPAP1-204ENST00000562303 ANAPC13Q9BS18 74 aa9.16□□□□□ -0.94
RPAP1-204ENST00000562303 RFNGQ9Y644 331 aa9.16□□□□□ -0.94
RPAP1-204ENST00000562303 ABCA7Q8IZY2 2146 aa9.16□□□□□ -0.94
RPAP1-204ENST00000562303 COL4A1P02462 1669 aa9.16□□□□□ -0.94
RPAP1-204ENST00000562303 KLF12Q9Y4X4 402 aa9.16□□□□□ -0.94
RPAP1-204ENST00000562303 E7EQL1 145 aa9.16□□□□□ -0.94
RPAP1-204ENST00000562303 GAGE13Q4V321 117 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms