RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 CHRDL1Q9BU40 450 aa13.31□□□□□ -0.28
HDDC3-206ENST00000561036 PARLQ9H300 379 aa13.31□□□□□ -0.28
HDDC3-206ENST00000561036 SDF2L1Q9HCN8 221 aa13.31□□□□□ -0.28
HDDC3-206ENST00000561036 NAT8Q9UHE5 227 aa13.31□□□□□ -0.28
HDDC3-206ENST00000561036 LINC00527Q9UJ94 153 aa13.31□□□□□ -0.28
HDDC3-206ENST00000561036 PDZD2O15018 2839 aa13.31□□□□□ -0.28
HDDC3-206ENST00000561036 A0A0G2JLM5 398 aa13.3□□□□□ -0.28
HDDC3-206ENST00000561036 C7orf77A4D0Y5 90 aa13.3□□□□□ -0.28
HDDC3-206ENST00000561036 DNASE2O00115 360 aaPredicted RBP13.3□□□□□ -0.28
HDDC3-206ENST00000561036 TGOLN2O43493 480 aa13.3□□□□□ -0.28
HDDC3-206ENST00000561036 PYYP10082 97 aa13.3□□□□□ -0.28
HDDC3-206ENST00000561036 GP9P14770 177 aa13.3□□□□□ -0.28
HDDC3-206ENST00000561036 TPPP2P59282 170 aa13.3□□□□□ -0.28
HDDC3-206ENST00000561036 RELQ04864 619 aaPredicted RBP13.3□□□□□ -0.28
HDDC3-206ENST00000561036 SCGB2A2Q13296 93 aa13.3□□□□□ -0.28
HDDC3-206ENST00000561036 TMEM241Q24JQ0 296 aa13.3□□□□□ -0.28
HDDC3-206ENST00000561036 FAM209BQ5JX69 171 aa13.3□□□□□ -0.28
HDDC3-206ENST00000561036 ZNF343Q6P1L6 599 aa13.3□□□□□ -0.28
HDDC3-206ENST00000561036 SIGLECL1Q8N7X8 197 aa13.3□□□□□ -0.28
HDDC3-206ENST00000561036 RPUSD4Q96CM3 377 aaKnown RBP13.3□□□□□ -0.28
HDDC3-206ENST00000561036 TMEM160Q9NX00 188 aa13.3□□□□□ -0.28
HDDC3-206ENST00000561036 CSPG4Q6UVK1 2322 aa13.3□□□□□ -0.28
HDDC3-206ENST00000561036 VPS13CQ709C8 3753 aa13.29□□□□□ -0.28
HDDC3-206ENST00000561036 BMPR1BO00238 502 aa13.29□□□□□ -0.28
HDDC3-206ENST00000561036 IGHG4P01861 327 aa13.29□□□□□ -0.28
HDDC3-206ENST00000561036 NPPCP23582 126 aa13.29□□□□□ -0.28
HDDC3-206ENST00000561036 KIAA0141Q14154 515 aaPredicted RBP13.29□□□□□ -0.28
HDDC3-206ENST00000561036 USF2Q15853 346 aaPredicted RBP13.29□□□□□ -0.28
HDDC3-206ENST00000561036 CLEC19AQ6UXS0 136 aa13.29□□□□□ -0.28
HDDC3-206ENST00000561036 BPIFA4PQ86YQ2 179 aa13.29□□□□□ -0.28
HDDC3-206ENST00000561036 RPS10P5Q9NQ39 176 aa13.29□□□□□ -0.28
HDDC3-206ENST00000561036 YAE1D1Q9NRH1 226 aa13.29□□□□□ -0.28
HDDC3-206ENST00000561036 CSMD2Q7Z408 3487 aa13.29□□□□□ -0.28
HDDC3-206ENST00000561036 A0A087WWC5 75 aa13.28□□□□□ -0.28
HDDC3-206ENST00000561036 NDUFB4O95168 129 aa13.28□□□□□ -0.28
HDDC3-206ENST00000561036 NBEAP1P0C6P0 100 aa13.28□□□□□ -0.28
HDDC3-206ENST00000561036 HIST1H1EP10412 219 aaKnown RBP13.28□□□□□ -0.28
HDDC3-206ENST00000561036 PF4V1P10720 104 aa13.28□□□□□ -0.28
HDDC3-206ENST00000561036 Q8N2B8 174 aa13.28□□□□□ -0.28
HDDC3-206ENST00000561036 SMCO4Q9NRQ5 59 aa13.28□□□□□ -0.28
HDDC3-206ENST00000561036 RABAC1Q9UI14 185 aa13.28□□□□□ -0.28
HDDC3-206ENST00000561036 PRELID1Q9Y255 219 aa13.28□□□□□ -0.28
HDDC3-206ENST00000561036 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.27□□□□□ -0.29
HDDC3-206ENST00000561036 SCO2A0A1W2PP80 73 aa13.27□□□□□ -0.29
HDDC3-206ENST00000561036 ZNF98A6NK75 572 aa13.27□□□□□ -0.29
HDDC3-206ENST00000561036 GGTLC3B5MD39 225 aa13.27□□□□□ -0.29
HDDC3-206ENST00000561036 RAB9AP51151 201 aa13.27□□□□□ -0.29
HDDC3-206ENST00000561036 SUMO1P63165 101 aaKnown RBP13.27□□□□□ -0.29
HDDC3-206ENST00000561036 ZNF674Q2M3X9 581 aa13.27□□□□□ -0.29
HDDC3-206ENST00000561036 TOMM20LQ6UXN7 152 aa13.27□□□□□ -0.29
HDDC3-206ENST00000561036 C20orf24Q9BUV8 137 aa13.27□□□□□ -0.29
HDDC3-206ENST00000561036 TUBA4BQ9H853 241 aa13.27□□□□□ -0.29
HDDC3-206ENST00000561036 ZFAND3Q9H8U3 227 aa13.27□□□□□ -0.29
HDDC3-206ENST00000561036 ZNF702PQ9H963 129 aa13.27□□□□□ -0.29
HDDC3-206ENST00000561036 UNC79Q9P2D8 2635 aa13.27□□□□□ -0.29
HDDC3-206ENST00000561036 MYCNOSP40205 109 aa13.26□□□□□ -0.29
HDDC3-206ENST00000561036 SLC35B1P78383 322 aa13.26□□□□□ -0.29
HDDC3-206ENST00000561036 OR4F17Q8NGA8 305 aa13.26□□□□□ -0.29
HDDC3-206ENST00000561036 ZNF414Q96IQ9 312 aa13.26□□□□□ -0.29
HDDC3-206ENST00000561036 GNB4Q9HAV0 340 aa13.26□□□□□ -0.29
HDDC3-206ENST00000561036 GCN1Q92616 2671 aaKnown RBP13.26□□□□□ -0.29
HDDC3-206ENST00000561036 PSMB8P28062 276 aa13.25□□□□□ -0.29
HDDC3-206ENST00000561036 LEMD1Q68G75 181 aa13.25□□□□□ -0.29
HDDC3-206ENST00000561036 IL17RELQ6ZVW7 336 aa13.25□□□□□ -0.29
HDDC3-206ENST00000561036 ZNF329Q86UD4 541 aa13.25□□□□□ -0.29
HDDC3-206ENST00000561036 KLK15Q9H2R5 256 aa13.25□□□□□ -0.29
HDDC3-206ENST00000561036 LY96Q9Y6Y9 160 aa13.25□□□□□ -0.29
HDDC3-206ENST00000561036 ITPR3Q14573 2671 aa13.25□□□□□ -0.29
HDDC3-206ENST00000561036 C9JCJ5 164 aa13.24□□□□□ -0.29
HDDC3-206ENST00000561036 MRPS12O15235 138 aaKnown RBP13.24□□□□□ -0.29
HDDC3-206ENST00000561036 IGLC2P0DOY2 106 aa13.24□□□□□ -0.29
HDDC3-206ENST00000561036 RPL7P18124 248 aaKnown RBP13.24□□□□□ -0.29
HDDC3-206ENST00000561036 ARL3P36405 182 aa13.24□□□□□ -0.29
HDDC3-206ENST00000561036 RPL23P62829 140 aaKnown RBP13.24□□□□□ -0.29
HDDC3-206ENST00000561036 FOXE3Q13461 319 aa13.24□□□□□ -0.29
HDDC3-206ENST00000561036 TMEM88Q6PEY1 159 aa13.24□□□□□ -0.29
HDDC3-206ENST00000561036 LYPD1Q8N2G4 141 aa13.24□□□□□ -0.29
HDDC3-206ENST00000561036 C2CD4CQ8TF44 421 aa13.24□□□□□ -0.29
HDDC3-206ENST00000561036 HIST1H2BAQ96A08 127 aa13.24□□□□□ -0.29
HDDC3-206ENST00000561036 ELOVL1Q9BW60 279 aa13.24□□□□□ -0.29
HDDC3-206ENST00000561036 OTORQ9NRC9 128 aa13.24□□□□□ -0.29
HDDC3-206ENST00000561036 TMEM242Q9NWH2 141 aa13.24□□□□□ -0.29
HDDC3-206ENST00000561036 CXorf65A6NEN9 183 aa13.23□□□□□ -0.29
HDDC3-206ENST00000561036 CLDN34H7C241 214 aa13.23□□□□□ -0.29
HDDC3-206ENST00000561036 TSPAN4O14817 238 aa13.23□□□□□ -0.29
HDDC3-206ENST00000561036 ELANEP08246 267 aa13.23□□□□□ -0.29
HDDC3-206ENST00000561036 CRYBB3P26998 211 aa13.23□□□□□ -0.29
HDDC3-206ENST00000561036 RANP62826 216 aaKnown RBP13.23□□□□□ -0.29
HDDC3-206ENST00000561036 PDE6HQ13956 83 aa13.23□□□□□ -0.29
HDDC3-206ENST00000561036 TMEM95Q3KNT9 176 aa13.23□□□□□ -0.29
HDDC3-206ENST00000561036 TEX38Q6PEX7 206 aa13.23□□□□□ -0.29
HDDC3-206ENST00000561036 CBLN2Q8IUK8 224 aa13.23□□□□□ -0.29
HDDC3-206ENST00000561036 BLNKQ8WV28 456 aa13.23□□□□□ -0.29
HDDC3-206ENST00000561036 GPR82Q96P67 336 aa13.23□□□□□ -0.29
HDDC3-206ENST00000561036 CTDSP1Q9GZU7 261 aa13.23□□□□□ -0.29
HDDC3-206ENST00000561036 ZNF586Q9NXT0 402 aa13.23□□□□□ -0.29
HDDC3-206ENST00000561036 MAP1AP78559 2803 aaPredicted RBP13.22□□□□□ -0.29
HDDC3-206ENST00000561036 TRBV19A0A075B6N1 114 aa13.22□□□□□ -0.29
HDDC3-206ENST00000561036 HELTA6NFD8 242 aa13.22□□□□□ -0.29
HDDC3-206ENST00000561036 NDUFA4O00483 81 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms