RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 ISOC2Q96AB3 205 aa10.06□□□□□ -0.8
SNX1-211ENST00000560829 PRDM13Q9H4Q3 707 aa10.06□□□□□ -0.8
SNX1-211ENST00000560829 TRBV20OR9-2A0A075B6H5 130 aa10.05□□□□□ -0.8
SNX1-211ENST00000560829 TRBV7-1A0A0A6YYK4 115 aa10.05□□□□□ -0.8
SNX1-211ENST00000560829 OR2T8A6NH00 312 aa10.05□□□□□ -0.8
SNX1-211ENST00000560829 IGHV3-23P01764 117 aa10.05□□□□□ -0.8
SNX1-211ENST00000560829 IGHV4-59P01825 116 aa10.05□□□□□ -0.8
SNX1-211ENST00000560829 NBEAP1P0C6P0 100 aa10.05□□□□□ -0.8
SNX1-211ENST00000560829 CRYBB3P26998 211 aa10.05□□□□□ -0.8
SNX1-211ENST00000560829 BLCAPP62952 87 aa10.05□□□□□ -0.8
SNX1-211ENST00000560829 USF2Q15853 346 aaPredicted RBP10.05□□□□□ -0.8
SNX1-211ENST00000560829 C9orf152Q5JTZ5 239 aa10.05□□□□□ -0.8
SNX1-211ENST00000560829 LINC01551Q86U37 167 aa10.05□□□□□ -0.8
SNX1-211ENST00000560829 WFDC11Q8NEX6 87 aa10.05□□□□□ -0.8
SNX1-211ENST00000560829 HIST1H2BAQ96A08 127 aa10.05□□□□□ -0.8
SNX1-211ENST00000560829 EEF1AKMT3Q96AZ1 226 aa10.05□□□□□ -0.8
SNX1-211ENST00000560829 ZNF414Q96IQ9 312 aa10.05□□□□□ -0.8
SNX1-211ENST00000560829 ELOVL1Q9BW60 279 aa10.05□□□□□ -0.8
SNX1-211ENST00000560829 LY96Q9Y6Y9 160 aa10.05□□□□□ -0.8
SNX1-211ENST00000560829 MT-ND4LP03901 98 aa10.04□□□□□ -0.8
SNX1-211ENST00000560829 RNF212Q495C1 297 aa10.04□□□□□ -0.8
SNX1-211ENST00000560829 Q6YL49 198 aa10.04□□□□□ -0.8
SNX1-211ENST00000560829 ZNF600Q6ZNG1 722 aa10.04□□□□□ -0.8
SNX1-211ENST00000560829 TMEM190Q8WZ59 177 aa10.04□□□□□ -0.8
SNX1-211ENST00000560829 CCDC140Q96MF4 163 aa10.04□□□□□ -0.8
SNX1-211ENST00000560829 FOXC2Q99958 501 aa10.04□□□□□ -0.8
SNX1-211ENST00000560829 CHRDL1Q9BU40 450 aa10.04□□□□□ -0.8
SNX1-211ENST00000560829 CLDN34H7C241 214 aa10.04□□□□□ -0.8
SNX1-211ENST00000560829 AP4M1O00189 453 aa10.04□□□□□ -0.8
SNX1-211ENST00000560829 HIST1H1EP10412 219 aaKnown RBP10.04□□□□□ -0.8
SNX1-211ENST00000560829 RPL35P42766 123 aaKnown RBP10.04□□□□□ -0.8
SNX1-211ENST00000560829 LEMD1Q68G75 181 aa10.04□□□□□ -0.8
SNX1-211ENST00000560829 ZNF329Q86UD4 541 aa10.04□□□□□ -0.8
SNX1-211ENST00000560829 CELSR1Q9NYQ6 3014 aa10.03□□□□□ -0.8
SNX1-211ENST00000560829 FOLR2P14207 255 aa10.03□□□□□ -0.8
SNX1-211ENST00000560829 CD99P14209 185 aa10.03□□□□□ -0.8
SNX1-211ENST00000560829 GPR183P32249 361 aa10.03□□□□□ -0.8
SNX1-211ENST00000560829 ATP5G2Q06055 141 aa10.03□□□□□ -0.8
SNX1-211ENST00000560829 BPIFA4PQ86YQ2 179 aa10.03□□□□□ -0.8
SNX1-211ENST00000560829 FAM24BQ8N5W8 94 aa10.03□□□□□ -0.8
SNX1-211ENST00000560829 ANAPC16Q96DE5 110 aa10.03□□□□□ -0.8
SNX1-211ENST00000560829 MS4A10Q96PG2 267 aa10.03□□□□□ -0.8
SNX1-211ENST00000560829 LINC00527Q9UJ94 153 aa10.03□□□□□ -0.8
SNX1-211ENST00000560829 RNF24Q9Y225 148 aa10.03□□□□□ -0.8
SNX1-211ENST00000560829 MAP1AP78559 2803 aaPredicted RBP10.02□□□□□ -0.8
SNX1-211ENST00000560829 ZNF98A6NK75 572 aa10.02□□□□□ -0.8
SNX1-211ENST00000560829 MRPS12O15235 138 aaKnown RBP10.02□□□□□ -0.8
SNX1-211ENST00000560829 CLEC3BP05452 202 aa10.02□□□□□ -0.8
SNX1-211ENST00000560829 CFHR3Q02985 330 aa10.02□□□□□ -0.8
SNX1-211ENST00000560829 Q6ZS46 218 aa10.02□□□□□ -0.8
SNX1-211ENST00000560829 TEX29Q8N6K0 151 aa10.02□□□□□ -0.8
SNX1-211ENST00000560829 VPREB3Q9UKI3 123 aa10.02□□□□□ -0.8
SNX1-211ENST00000560829 HELZ2Q9BYK8 2649 aaKnown RBP10.02□□□□□ -0.81
SNX1-211ENST00000560829 CR1P17927 2039 aa10.02□□□□□ -0.81
SNX1-211ENST00000560829 PRRC2AP48634 2157 aaKnown RBP10.02□□□□□ -0.81
SNX1-211ENST00000560829 HELTA6NFD8 242 aa10.02□□□□□ -0.81
SNX1-211ENST00000560829 TGOLN2O43493 480 aa10.02□□□□□ -0.81
SNX1-211ENST00000560829 IGLV1-40P01703 118 aa10.02□□□□□ -0.81
SNX1-211ENST00000560829 IGLC2P0DOY2 106 aa10.02□□□□□ -0.81
SNX1-211ENST00000560829 RANP62826 216 aaKnown RBP10.02□□□□□ -0.81
SNX1-211ENST00000560829 ELOBQ15370 118 aa10.02□□□□□ -0.81
SNX1-211ENST00000560829 CIARTQ8N365 385 aaPredicted RBP10.02□□□□□ -0.81
SNX1-211ENST00000560829 USMG5Q96IX5 58 aa10.02□□□□□ -0.81
SNX1-211ENST00000560829 ZFAND3Q9H8U3 227 aa10.02□□□□□ -0.81
SNX1-211ENST00000560829 ZNF586Q9NXT0 402 aa10.02□□□□□ -0.81
SNX1-211ENST00000560829 ABCA1O95477 2261 aa10.02□□□□□ -0.81
SNX1-211ENST00000560829 TRGV3P03979 118 aa10.01□□□□□ -0.81
SNX1-211ENST00000560829 S100A7P31151 101 aa10.01□□□□□ -0.81
SNX1-211ENST00000560829 TAS2R60P59551 318 aa10.01□□□□□ -0.81
SNX1-211ENST00000560829 OCC1Q8TAD7 63 aa10.01□□□□□ -0.81
SNX1-211ENST00000560829 BLNKQ8WV28 456 aa10.01□□□□□ -0.81
SNX1-211ENST00000560829 NOL4LQ96MY1 436 aaPredicted RBP10.01□□□□□ -0.81
SNX1-211ENST00000560829 DOPEY2Q9Y3R5 2298 aa10□□□□□ -0.81
SNX1-211ENST00000560829 TRBV19A0A075B6N1 114 aa10□□□□□ -0.81
SNX1-211ENST00000560829 PGPEP1LA6NFU8 196 aa10□□□□□ -0.81
SNX1-211ENST00000560829 BMPR1BO00238 502 aa10□□□□□ -0.81
SNX1-211ENST00000560829 PEX7O00628 323 aa10□□□□□ -0.81
SNX1-211ENST00000560829 CRYBA1P05813 215 aa10□□□□□ -0.81
SNX1-211ENST00000560829 ATF4P18848 351 aaPredicted RBP10□□□□□ -0.81
SNX1-211ENST00000560829 RAB5AP20339 215 aa10□□□□□ -0.81
SNX1-211ENST00000560829 TOMM20LQ6UXN7 152 aa10□□□□□ -0.81
SNX1-211ENST00000560829 CLEC19AQ6UXS0 136 aa10□□□□□ -0.81
SNX1-211ENST00000560829 OR4F17Q8NGA8 305 aa10□□□□□ -0.81
SNX1-211ENST00000560829 RABAC1Q9UI14 185 aa10□□□□□ -0.81
SNX1-211ENST00000560829 CDC42EP3Q9UKI2 254 aa10□□□□□ -0.81
SNX1-211ENST00000560829 EPDR1Q9UM22 224 aa10□□□□□ -0.81
SNX1-211ENST00000560829 PGPA6NDG6 321 aa10□□□□□ -0.81
SNX1-211ENST00000560829 H7BYZ3 331 aa10□□□□□ -0.81
SNX1-211ENST00000560829 PPP1R2P9O14990 202 aa10□□□□□ -0.81
SNX1-211ENST00000560829 GNG4P50150 75 aa10□□□□□ -0.81
SNX1-211ENST00000560829 RELQ04864 619 aaPredicted RBP10□□□□□ -0.81
SNX1-211ENST00000560829 CENPWQ5EE01 88 aa10□□□□□ -0.81
SNX1-211ENST00000560829 LYPD1Q8N2G4 141 aa10□□□□□ -0.81
SNX1-211ENST00000560829 C5orf17Q8NAS9 161 aa10□□□□□ -0.81
SNX1-211ENST00000560829 IGF2BP2-AS1Q96M15 143 aa10□□□□□ -0.81
SNX1-211ENST00000560829 Q9H3A6 140 aa10□□□□□ -0.81
SNX1-211ENST00000560829 OTORQ9NRC9 128 aa10□□□□□ -0.81
SNX1-211ENST00000560829 ZNF469Q96JG9 3925 aaPredicted RBP10□□□□□ -0.81
SNX1-211ENST00000560829 CREBBPQ92793 2442 aa9.99□□□□□ -0.81
SNX1-211ENST00000560829 K7EN84 100 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms