RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 FBLN7Q53RD9 439 aa11.09□□□□□ -0.63
TRAF3-208ENST00000560371 EPDR1Q9UM22 224 aa11.09□□□□□ -0.63
TRAF3-208ENST00000560371 BUB1B-PAK6H3BSN5 160 aa11.09□□□□□ -0.63
TRAF3-208ENST00000560371 GNG5P63218 68 aa11.09□□□□□ -0.63
TRAF3-208ENST00000560371 SRSF7Q16629 238 aaKnown RBP eCLIP11.09□□□□□ -0.63
TRAF3-208ENST00000560371 OR9G4Q8NGQ1 327 aa11.09□□□□□ -0.63
TRAF3-208ENST00000560371 NDUFS8O00217 210 aa11.08□□□□□ -0.63
TRAF3-208ENST00000560371 SDHCQ99643 169 aaPredicted RBP11.08□□□□□ -0.63
TRAF3-208ENST00000560371 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.08□□□□□ -0.64
TRAF3-208ENST00000560371 FAM169BQ8N8A8 192 aa11.08□□□□□ -0.64
TRAF3-208ENST00000560371 PYYP10082 97 aa11.08□□□□□ -0.64
TRAF3-208ENST00000560371 SAA4P35542 130 aa11.08□□□□□ -0.64
TRAF3-208ENST00000560371 COL8A2P25067 703 aa11.08□□□□□ -0.64
TRAF3-208ENST00000560371 IFI27P40305 119 aaPredicted RBP11.08□□□□□ -0.64
TRAF3-208ENST00000560371 EFNB3Q15768 340 aa11.08□□□□□ -0.64
TRAF3-208ENST00000560371 CD177Q8N6Q3 437 aa11.08□□□□□ -0.64
TRAF3-208ENST00000560371 KIR3DL3Q8N743 410 aa11.08□□□□□ -0.64
TRAF3-208ENST00000560371 OVOL1O14753 267 aa11.08□□□□□ -0.64
TRAF3-208ENST00000560371 GATA3P23771 443 aa11.08□□□□□ -0.64
TRAF3-208ENST00000560371 C10orf55Q5SWW7 151 aa11.08□□□□□ -0.64
TRAF3-208ENST00000560371 ST20Q9HBF5 79 aa11.08□□□□□ -0.64
TRAF3-208ENST00000560371 TRGV11A0A075B6L2 103 aa11.08□□□□□ -0.64
TRAF3-208ENST00000560371 ZNF329Q86UD4 541 aa11.08□□□□□ -0.64
TRAF3-208ENST00000560371 NR2C2APQ86WQ0 139 aa11.08□□□□□ -0.64
TRAF3-208ENST00000560371 RNASE7Q9H1E1 156 aaKnown RBP11.08□□□□□ -0.64
TRAF3-208ENST00000560371 USMG5Q96IX5 58 aa11.07□□□□□ -0.64
TRAF3-208ENST00000560371 HOXA5P20719 270 aa11.07□□□□□ -0.64
TRAF3-208ENST00000560371 PMS2P5A8MQ11 134 aa11.07□□□□□ -0.64
TRAF3-208ENST00000560371 CCL20P78556 96 aa11.07□□□□□ -0.64
TRAF3-208ENST00000560371 RNF5Q99942 180 aa11.07□□□□□ -0.64
TRAF3-208ENST00000560371 B3GALT5-AS1P59052 145 aa11.07□□□□□ -0.64
TRAF3-208ENST00000560371 PSG8Q9UQ74 426 aa11.07□□□□□ -0.64
TRAF3-208ENST00000560371 PIEZO2Q9H5I5 2752 aa11.07□□□□□ -0.64
TRAF3-208ENST00000560371 IGKV1-27A0A075B6S5 117 aa11.07□□□□□ -0.64
TRAF3-208ENST00000560371 C1QTNF9BB2RNN3 333 aa11.07□□□□□ -0.64
TRAF3-208ENST00000560371 J3QKU1 62 aa11.07□□□□□ -0.64
TRAF3-208ENST00000560371 RPL15P61313 204 aaKnown RBP11.07□□□□□ -0.64
TRAF3-208ENST00000560371 SELENOKQ9Y6D0 94 aa11.07□□□□□ -0.64
TRAF3-208ENST00000560371 MSMBP08118 114 aa11.06□□□□□ -0.64
TRAF3-208ENST00000560371 Q5PR19 223 aa11.06□□□□□ -0.64
TRAF3-208ENST00000560371 ERVK11-1P61568 191 aa11.06□□□□□ -0.64
TRAF3-208ENST00000560371 NEUROG1Q92886 237 aa11.06□□□□□ -0.64
TRAF3-208ENST00000560371 NPIPB5A8MRT5 1133 aa11.06□□□□□ -0.64
TRAF3-208ENST00000560371 IGHV4-39P01824 125 aa11.06□□□□□ -0.64
TRAF3-208ENST00000560371 CLPSP04118 112 aa11.06□□□□□ -0.64
TRAF3-208ENST00000560371 C1QTNF9P0C862 333 aa11.06□□□□□ -0.64
TRAF3-208ENST00000560371 GLRX5Q86SX6 157 aa11.06□□□□□ -0.64
TRAF3-208ENST00000560371 KLHDC3Q9BQ90 382 aa11.06□□□□□ -0.64
TRAF3-208ENST00000560371 PMCHL2Q9BQD1 86 aa11.06□□□□□ -0.64
TRAF3-208ENST00000560371 A0A087WX48 190 aa11.06□□□□□ -0.64
TRAF3-208ENST00000560371 A0A1W2PRE2 83 aa11.06□□□□□ -0.64
TRAF3-208ENST00000560371 STAG3L3P0CL85 134 aa11.06□□□□□ -0.64
TRAF3-208ENST00000560371 RPL35AP18077 110 aaKnown RBP11.06□□□□□ -0.64
TRAF3-208ENST00000560371 IGKV1D-8A0A087WSZ0 117 aa11.06□□□□□ -0.64
TRAF3-208ENST00000560371 SOD3P08294 240 aa11.06□□□□□ -0.64
TRAF3-208ENST00000560371 PSG1P11464 419 aa11.06□□□□□ -0.64
TRAF3-208ENST00000560371 NDUFA3O95167 84 aa11.06□□□□□ -0.64
TRAF3-208ENST00000560371 PPIFP30405 207 aaKnown RBP11.06□□□□□ -0.64
TRAF3-208ENST00000560371 KIAA1549Q9HCM3 1950 aa11.05□□□□□ -0.64
TRAF3-208ENST00000560371 SRP19P09132 144 aaKnown RBP11.05□□□□□ -0.64
TRAF3-208ENST00000560371 CHCHD5Q9BSY4 110 aa11.05□□□□□ -0.64
TRAF3-208ENST00000560371 MYO9AB2RTY4 2548 aa11.05□□□□□ -0.64
TRAF3-208ENST00000560371 HCFC1P51610 2035 aa11.05□□□□□ -0.64
TRAF3-208ENST00000560371 TMEM155Q4W5P6 130 aa11.05□□□□□ -0.64
TRAF3-208ENST00000560371 TCF23Q7RTU1 214 aa11.05□□□□□ -0.64
TRAF3-208ENST00000560371 RNF126Q9BV68 326 aa11.05□□□□□ -0.64
TRAF3-208ENST00000560371 F8VVB4 439 aa11.05□□□□□ -0.64
TRAF3-208ENST00000560371 F8VWA3 439 aa11.05□□□□□ -0.64
TRAF3-208ENST00000560371 APOMO95445 188 aa11.05□□□□□ -0.64
TRAF3-208ENST00000560371 IZUMO1RA6ND01 250 aa11.05□□□□□ -0.64
TRAF3-208ENST00000560371 ID3Q02535 119 aa11.05□□□□□ -0.64
TRAF3-208ENST00000560371 MAPK1IP1LQ8NDC0 245 aa11.05□□□□□ -0.64
TRAF3-208ENST00000560371 PRADC1Q9BSG0 188 aa11.05□□□□□ -0.64
TRAF3-208ENST00000560371 SEPSECSQ9HD40 501 aaKnown RBP11.05□□□□□ -0.64
TRAF3-208ENST00000560371 A6NNC1 897 aa11.05□□□□□ -0.64
TRAF3-208ENST00000560371 F2Z2F3 143 aa11.05□□□□□ -0.64
TRAF3-208ENST00000560371 EFNB1P98172 346 aa11.05□□□□□ -0.64
TRAF3-208ENST00000560371 LYPD2Q6UXB3 125 aa11.05□□□□□ -0.64
TRAF3-208ENST00000560371 PNRC2Q9NPJ4 139 aaKnown RBP11.05□□□□□ -0.64
TRAF3-208ENST00000560371 TYMSP04818 313 aa11.04□□□□□ -0.64
TRAF3-208ENST00000560371 KLF17Q5JT82 389 aaPredicted RBP11.04□□□□□ -0.64
TRAF3-208ENST00000560371 Q96MF0 132 aa11.04□□□□□ -0.64
TRAF3-208ENST00000560371 PARD6GQ9BYG4 376 aaPredicted RBP11.04□□□□□ -0.64
TRAF3-208ENST00000560371 OR5A1Q8NGJ0 315 aa11.04□□□□□ -0.64
TRAF3-208ENST00000560371 SLC25A39Q9BZJ4 359 aaPredicted RBP11.04□□□□□ -0.64
TRAF3-208ENST00000560371 SIGLEC9Q9Y336 463 aa11.04□□□□□ -0.64
TRAF3-208ENST00000560371 GAFA1Q96PS6 74 aa11.04□□□□□ -0.64
TRAF3-208ENST00000560371 IMMP2LQ96T52 175 aa11.04□□□□□ -0.64
TRAF3-208ENST00000560371 C1QTNF4Q9BXJ3 329 aa11.04□□□□□ -0.64
TRAF3-208ENST00000560371 PLA2G2CQ5R387 149 aa11.04□□□□□ -0.64
TRAF3-208ENST00000560371 A0A1B0GWJ7 208 aa11.03□□□□□ -0.64
TRAF3-208ENST00000560371 ACTL10Q5JWF8 245 aa11.03□□□□□ -0.64
TRAF3-208ENST00000560371 H0YJW9 148 aa11.03□□□□□ -0.64
TRAF3-208ENST00000560371 SMIM13P0DJ93 91 aa11.03□□□□□ -0.64
TRAF3-208ENST00000560371 IGFL3Q6UXB1 125 aa11.03□□□□□ -0.64
TRAF3-208ENST00000560371 CST9LQ9H4G1 147 aa11.03□□□□□ -0.64
TRAF3-208ENST00000560371 PRTN3P24158 256 aa11.03□□□□□ -0.64
TRAF3-208ENST00000560371 RPL32P62910 135 aaKnown RBP11.03□□□□□ -0.64
TRAF3-208ENST00000560371 NDPQ00604 133 aa11.03□□□□□ -0.64
TRAF3-208ENST00000560371 COQ2Q96H96 371 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms