RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 OR5D16Q8NGK9 328 aa1.05□□□□□ -2.24
GABPB1-209ENST00000559100 ZNF418Q8TF45 676 aaPredicted RBP1.05□□□□□ -2.24
GABPB1-209ENST00000559100 PYDC1Q8WXC3 89 aa1.05□□□□□ -2.24
GABPB1-209ENST00000559100 Q96M85 177 aa1.05□□□□□ -2.24
GABPB1-209ENST00000559100 LINC00467Q9BRT7 94 aa1.05□□□□□ -2.24
GABPB1-209ENST00000559100 TMEM126AQ9H061 195 aa1.05□□□□□ -2.24
GABPB1-209ENST00000559100 C14orf132Q9NPU4 83 aa1.05□□□□□ -2.24
GABPB1-209ENST00000559100 BATF3Q9NR55 127 aa1.05□□□□□ -2.24
GABPB1-209ENST00000559100 SMPXQ9UHP9 88 aa1.05□□□□□ -2.24
GABPB1-209ENST00000559100 HS3ST2Q9Y278 367 aa1.05□□□□□ -2.24
GABPB1-209ENST00000559100 LAMTOR2Q9Y2Q5 125 aa1.05□□□□□ -2.24
GABPB1-209ENST00000559100 HSPB11Q9Y547 144 aa1.05□□□□□ -2.24
GABPB1-209ENST00000559100 LY96Q9Y6Y9 160 aa1.05□□□□□ -2.24
GABPB1-209ENST00000559100 MALRD1Q5VYJ5 2156 aa1.05□□□□□ -2.24
GABPB1-209ENST00000559100 CPAMD8Q8IZJ3 1885 aa1.05□□□□□ -2.24
GABPB1-209ENST00000559100 SETD5Q9C0A6 1442 aa1.05□□□□□ -2.24
GABPB1-209ENST00000559100 NCKAP5O14513 1909 aa1.05□□□□□ -2.24
GABPB1-209ENST00000559100 PLXND1Q9Y4D7 1925 aa1.05□□□□□ -2.24
GABPB1-209ENST00000559100 MYH11P35749 1972 aa1.05□□□□□ -2.24
GABPB1-209ENST00000559100 BAHCC1Q9P281 2608 aa1.04□□□□□ -2.24
GABPB1-209ENST00000559100 ADAMTS7Q9UKP4 1686 aa1.04□□□□□ -2.24
GABPB1-209ENST00000559100 COL4A2P08572 1712 aa1.04□□□□□ -2.24
GABPB1-209ENST00000559100 A0A1W2PRE2 83 aa1.04□□□□□ -2.24
GABPB1-209ENST00000559100 K7ERJ3 54 aa1.04□□□□□ -2.24
GABPB1-209ENST00000559100 RER1O15258 196 aa1.04□□□□□ -2.24
GABPB1-209ENST00000559100 HIST1H2BKO60814 126 aa1.04□□□□□ -2.24
GABPB1-209ENST00000559100 MT-ND6P03923 174 aa1.04□□□□□ -2.24
GABPB1-209ENST00000559100 HIST1H2BJP06899 126 aa1.04□□□□□ -2.24
GABPB1-209ENST00000559100 MIFP14174 115 aa1.04□□□□□ -2.24
GABPB1-209ENST00000559100 ARPP19P56211 112 aa1.04□□□□□ -2.24
GABPB1-209ENST00000559100 NDUFA6P56556 154 aa1.04□□□□□ -2.24
GABPB1-209ENST00000559100 SURF2Q15527 256 aaPredicted RBP1.04□□□□□ -2.24
GABPB1-209ENST00000559100 C1orf140Q5VVS0 124 aa1.04□□□□□ -2.24
GABPB1-209ENST00000559100 KRTAP5-7Q6L8G8 165 aa1.04□□□□□ -2.24
GABPB1-209ENST00000559100 ANGPTL5Q86XS5 388 aa1.04□□□□□ -2.24
GABPB1-209ENST00000559100 TMEM35BQ8NCS4 154 aa1.04□□□□□ -2.24
GABPB1-209ENST00000559100 TMEM254Q8TBM7 123 aa1.04□□□□□ -2.24
GABPB1-209ENST00000559100 SFT2D1Q8WV19 159 aa1.04□□□□□ -2.24
GABPB1-209ENST00000559100 ZCCHC13Q8WW36 166 aaKnown RBP1.04□□□□□ -2.24
GABPB1-209ENST00000559100 RMND5BQ96G75 393 aaPredicted RBP1.04□□□□□ -2.24
GABPB1-209ENST00000559100 CACYBPQ9HB71 228 aaKnown RBP1.04□□□□□ -2.24
GABPB1-209ENST00000559100 NAT8BQ9UHF3 227 aa1.04□□□□□ -2.24
GABPB1-209ENST00000559100 NUBP2Q9Y5Y2 271 aa1.04□□□□□ -2.24
GABPB1-209ENST00000559100 PTPRBP23467 1997 aa1.04□□□□□ -2.24
GABPB1-209ENST00000559100 HEATR5AQ86XA9 2040 aa1.04□□□□□ -2.24
GABPB1-209ENST00000559100 RIMBP3CA6NJZ7 1639 aa1.04□□□□□ -2.24
GABPB1-209ENST00000559100 RIMBP3BA6NNM3 1639 aa1.04□□□□□ -2.24
GABPB1-209ENST00000559100 RIMBP3Q9UFD9 1639 aa1.04□□□□□ -2.24
GABPB1-209ENST00000559100 ARL5CA6NH57 179 aa1.03□□□□□ -2.24
GABPB1-209ENST00000559100 OR1I1O60431 355 aa1.03□□□□□ -2.24
GABPB1-209ENST00000559100 OR10J4P0C629 311 aa1.03□□□□□ -2.24
GABPB1-209ENST00000559100 FABP2P12104 132 aa1.03□□□□□ -2.24
GABPB1-209ENST00000559100 S100A11P31949 105 aa1.03□□□□□ -2.24
GABPB1-209ENST00000559100 RPL35P42766 123 aaKnown RBP1.03□□□□□ -2.24
GABPB1-209ENST00000559100 HBBP68871 147 aa1.03□□□□□ -2.24
GABPB1-209ENST00000559100 KLRD1Q13241 179 aa1.03□□□□□ -2.24
GABPB1-209ENST00000559100 CDK5R1Q15078 307 aa1.03□□□□□ -2.24
GABPB1-209ENST00000559100 OR5D14Q8NGL3 314 aa1.03□□□□□ -2.24
GABPB1-209ENST00000559100 OR9Q1Q8NGQ5 310 aa1.03□□□□□ -2.24
GABPB1-209ENST00000559100 THEM6Q8WUY1 208 aa1.03□□□□□ -2.24
GABPB1-209ENST00000559100 CHCHD1Q96BP2 118 aaKnown RBP1.03□□□□□ -2.24
GABPB1-209ENST00000559100 ZNF625Q96I27 306 aaPredicted RBP1.03□□□□□ -2.24
GABPB1-209ENST00000559100 RETNLBQ9BQ08 111 aa1.03□□□□□ -2.24
GABPB1-209ENST00000559100 AIF1LQ9BQI0 150 aa1.03□□□□□ -2.24
GABPB1-209ENST00000559100 TCEAL2Q9H3H9 227 aaPredicted RBP1.03□□□□□ -2.24
GABPB1-209ENST00000559100 C19orf12Q9NSK7 152 aa1.03□□□□□ -2.24
GABPB1-209ENST00000559100 TRAPPC2LQ9UL33 140 aa1.03□□□□□ -2.24
GABPB1-209ENST00000559100 GINS2Q9Y248 185 aa1.03□□□□□ -2.24
GABPB1-209ENST00000559100 ASB4Q9Y574 426 aa1.03□□□□□ -2.24
GABPB1-209ENST00000559100 CAMSAP2Q08AD1 1489 aa1.03□□□□□ -2.24
GABPB1-209ENST00000559100 TRAV12-1A0A0B4J245 112 aa1.02□□□□□ -2.25
GABPB1-209ENST00000559100 TRAV5A0A0B4J249 113 aa1.02□□□□□ -2.25
GABPB1-209ENST00000559100 TRDV1A0A1B0GX56 115 aa1.02□□□□□ -2.25
GABPB1-209ENST00000559100 CCDC160A6NGH7 325 aa1.02□□□□□ -2.25
GABPB1-209ENST00000559100 OR2T8A6NH00 312 aa1.02□□□□□ -2.25
GABPB1-209ENST00000559100 C2orf70A6NJV1 201 aa1.02□□□□□ -2.25
GABPB1-209ENST00000559100 C17orf112F2Z3M2 114 aa1.02□□□□□ -2.25
GABPB1-209ENST00000559100 GABARAPH6UMI1 98 aa1.02□□□□□ -2.25
GABPB1-209ENST00000559100 M0R233 179 aa1.02□□□□□ -2.25
GABPB1-209ENST00000559100 RGS12O14924 1447 aa1.02□□□□□ -2.25
GABPB1-209ENST00000559100 LYZL6O75951 148 aa1.02□□□□□ -2.25
GABPB1-209ENST00000559100 GLI3P10071 1580 aa1.02□□□□□ -2.25
GABPB1-209ENST00000559100 BCL2P10415 239 aa1.02□□□□□ -2.25
GABPB1-209ENST00000559100 SDC2P34741 201 aa1.02□□□□□ -2.25
GABPB1-209ENST00000559100 RAB4BP61018 213 aa1.02□□□□□ -2.25
GABPB1-209ENST00000559100 KRTAP21-2Q3LI59 83 aa1.02□□□□□ -2.25
GABPB1-209ENST00000559100 C3orf56Q8N813 242 aa1.02□□□□□ -2.25
GABPB1-209ENST00000559100 C12orf29Q8N999 325 aa1.02□□□□□ -2.25
GABPB1-209ENST00000559100 ST6GALNAC3Q8NDV1 305 aa1.02□□□□□ -2.25
GABPB1-209ENST00000559100 DISP1Q96F81 1524 aa1.02□□□□□ -2.25
GABPB1-209ENST00000559100 CCDC115Q96NT0 180 aa1.02□□□□□ -2.25
GABPB1-209ENST00000559100 NAA38Q9BRA0 125 aaKnown RBP1.02□□□□□ -2.25
GABPB1-209ENST00000559100 REG4Q9BYZ8 158 aa1.02□□□□□ -2.25
GABPB1-209ENST00000559100 OR2H1Q9GZK4 316 aa1.02□□□□□ -2.25
GABPB1-209ENST00000559100 OTORQ9NRC9 128 aa1.02□□□□□ -2.25
GABPB1-209ENST00000559100 RASL12Q9NYN1 266 aa1.02□□□□□ -2.25
GABPB1-209ENST00000559100 PCNX2A6NKB5 2137 aa1.01□□□□□ -2.25
GABPB1-209ENST00000559100 COL5A1P20908 1838 aaPredicted RBP1.01□□□□□ -2.25
GABPB1-209ENST00000559100 CEP164Q9UPV0 1460 aa1.01□□□□□ -2.25
GABPB1-209ENST00000559100 TECPR2O15040 1411 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms