RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 SLC25A4P12235 298 aa3.61□□□□□ -1.83
SPG11-208ENST00000558155 ETV6P41212 452 aa3.61□□□□□ -1.83
SPG11-208ENST00000558155 ATP5G3P48201 142 aa3.61□□□□□ -1.83
SPG11-208ENST00000558155 SCAND1P57086 179 aa3.61□□□□□ -1.83
SPG11-208ENST00000558155 TAS2R20P59543 309 aa3.61□□□□□ -1.83
SPG11-208ENST00000558155 PHLDA2Q53GA4 152 aa3.61□□□□□ -1.83
SPG11-208ENST00000558155 SPINK9Q5DT21 86 aa3.61□□□□□ -1.83
SPG11-208ENST00000558155 GDF5OSQ5U4N7 250 aa3.61□□□□□ -1.83
SPG11-208ENST00000558155 ETFRF1Q6IPR1 90 aa3.61□□□□□ -1.83
SPG11-208ENST00000558155 TBC1D26Q86UD7 250 aa3.61□□□□□ -1.83
SPG11-208ENST00000558155 ZNF709Q8N972 641 aa3.61□□□□□ -1.83
SPG11-208ENST00000558155 OR5H2Q8NGV7 314 aa3.61□□□□□ -1.83
SPG11-208ENST00000558155 COQ8AQ8NI60 647 aa3.61□□□□□ -1.83
SPG11-208ENST00000558155 IGF2BP2-AS1Q96M15 143 aa3.61□□□□□ -1.83
SPG11-208ENST00000558155 ABHD1Q96SE0 405 aa3.61□□□□□ -1.83
SPG11-208ENST00000558155 SLC35B3Q9H1N7 401 aa3.61□□□□□ -1.83
SPG11-208ENST00000558155 Q9H3A6 140 aa3.61□□□□□ -1.83
SPG11-208ENST00000558155 FNDC4Q9H6D8 234 aaPredicted RBP3.61□□□□□ -1.83
SPG11-208ENST00000558155 MRPL36Q9P0J6 103 aaKnown RBP3.61□□□□□ -1.83
SPG11-208ENST00000558155 MDFICQ9P1T7 246 aa3.61□□□□□ -1.83
SPG11-208ENST00000558155 KLK11Q9UBX7 282 aa3.61□□□□□ -1.83
SPG11-208ENST00000558155 A0A0B4J293 547 aa3.6□□□□□ -1.83
SPG11-208ENST00000558155 SERTM2A0A1B0GWG4 89 aa3.6□□□□□ -1.83
SPG11-208ENST00000558155 MEIS3P1A6NDR6 274 aa3.6□□□□□ -1.83
SPG11-208ENST00000558155 ZNF705GA8MUZ8 300 aaPredicted RBP3.6□□□□□ -1.83
SPG11-208ENST00000558155 RAB3DO95716 219 aa3.6□□□□□ -1.83
SPG11-208ENST00000558155 IGKV1-39P01597 117 aa3.6□□□□□ -1.83
SPG11-208ENST00000558155 APOA1P02647 267 aa3.6□□□□□ -1.83
SPG11-208ENST00000558155 SMR3BP02814 79 aaPredicted RBP3.6□□□□□ -1.83
SPG11-208ENST00000558155 IGKV1D-39P04432 117 aa3.6□□□□□ -1.83
SPG11-208ENST00000558155 IL4P05112 153 aa3.6□□□□□ -1.83
SPG11-208ENST00000558155 IGLC1P0CG04 106 aa3.6□□□□□ -1.83
SPG11-208ENST00000558155 RD3LP0DJH9 198 aa3.6□□□□□ -1.83
SPG11-208ENST00000558155 PSMB9P28065 219 aa3.6□□□□□ -1.83
SPG11-208ENST00000558155 OR10J1P30954 320 aa3.6□□□□□ -1.83
SPG11-208ENST00000558155 PSMB3P49720 205 aa3.6□□□□□ -1.83
SPG11-208ENST00000558155 RORCP51449 518 aa3.6□□□□□ -1.83
SPG11-208ENST00000558155 PAX9P55771 341 aa3.6□□□□□ -1.83
SPG11-208ENST00000558155 TAS2R46P59540 309 aa3.6□□□□□ -1.83
SPG11-208ENST00000558155 ZNF79Q15937 498 aa3.6□□□□□ -1.83
SPG11-208ENST00000558155 IDNKQ5T6J7 187 aa3.6□□□□□ -1.83
SPG11-208ENST00000558155 SERTAD4-AS1Q5TG53 156 aa3.6□□□□□ -1.83
SPG11-208ENST00000558155 FAM78BQ5VT40 261 aa3.6□□□□□ -1.83
SPG11-208ENST00000558155 SAMD13Q5VXD3 122 aa3.6□□□□□ -1.83
SPG11-208ENST00000558155 SFXN4Q6P4A7 337 aa3.6□□□□□ -1.83
SPG11-208ENST00000558155 LINC00518Q8N0U6 118 aa3.6□□□□□ -1.83
SPG11-208ENST00000558155 SYT8Q8NBV8 401 aa3.6□□□□□ -1.83
SPG11-208ENST00000558155 OR4C16Q8NGL9 310 aa3.6□□□□□ -1.83
SPG11-208ENST00000558155 RNF141Q8WVD5 230 aa3.6□□□□□ -1.83
SPG11-208ENST00000558155 MRGPRFQ96AM1 343 aa3.6□□□□□ -1.83
SPG11-208ENST00000558155 GNPNAT1Q96EK6 184 aaPredicted RBP3.6□□□□□ -1.83
SPG11-208ENST00000558155 S100A16Q96FQ6 103 aaKnown RBP3.6□□□□□ -1.83
SPG11-208ENST00000558155 C17orf77Q96MU5 243 aa3.6□□□□□ -1.83
SPG11-208ENST00000558155 RPRMQ9NS64 109 aa3.6□□□□□ -1.83
SPG11-208ENST00000558155 NDUFB11Q9NX14 153 aa3.6□□□□□ -1.83
SPG11-208ENST00000558155 FLG2Q5D862 2391 aaPredicted RBP3.6□□□□□ -1.83
SPG11-208ENST00000558155 A0A0J9YX75 114 aa3.59□□□□□ -1.83
SPG11-208ENST00000558155 ISLRO14498 428 aa3.59□□□□□ -1.83
SPG11-208ENST00000558155 TOMM40O96008 361 aa3.59□□□□□ -1.83
SPG11-208ENST00000558155 PSG1P11464 419 aa3.59□□□□□ -1.83
SPG11-208ENST00000558155 TSPOP30536 169 aa3.59□□□□□ -1.83
SPG11-208ENST00000558155 FHITP49789 147 aa3.59□□□□□ -1.83
SPG11-208ENST00000558155 RND2P52198 227 aa3.59□□□□□ -1.83
SPG11-208ENST00000558155 AKR1C2P52895 323 aa3.59□□□□□ -1.83
SPG11-208ENST00000558155 CEBPGP53567 150 aa3.59□□□□□ -1.83
SPG11-208ENST00000558155 UCP3P55916 312 aa3.59□□□□□ -1.83
SPG11-208ENST00000558155 DEFB1P60022 68 aa3.59□□□□□ -1.83
SPG11-208ENST00000558155 ERVFC1-1P60608 527 aa3.59□□□□□ -1.83
SPG11-208ENST00000558155 VAMP2P63027 116 aa3.59□□□□□ -1.83
SPG11-208ENST00000558155 OR5I1Q13606 314 aa3.59□□□□□ -1.83
SPG11-208ENST00000558155 ICAM4Q14773 271 aa3.59□□□□□ -1.83
SPG11-208ENST00000558155 FCN2Q15485 313 aa3.59□□□□□ -1.83
SPG11-208ENST00000558155 TBCEQ15813 527 aaPredicted RBP3.59□□□□□ -1.83
SPG11-208ENST00000558155 ESRGQ1W209 222 aa3.59□□□□□ -1.83
SPG11-208ENST00000558155 IZUMO4Q1ZYL8 232 aa3.59□□□□□ -1.83
SPG11-208ENST00000558155 RNASE12Q5GAN4 147 aaKnown RBP3.59□□□□□ -1.83
SPG11-208ENST00000558155 C1orf194Q5T5A4 169 aa3.59□□□□□ -1.83
SPG11-208ENST00000558155 PRSS54Q6PEW0 395 aa3.59□□□□□ -1.83
SPG11-208ENST00000558155 Q6ZSN1 163 aa3.59□□□□□ -1.83
SPG11-208ENST00000558155 NOXA1Q86UR1 476 aa3.59□□□□□ -1.83
SPG11-208ENST00000558155 OR51G1Q8NGK1 321 aa3.59□□□□□ -1.83
SPG11-208ENST00000558155 OR5H6Q8NGV6 325 aa3.59□□□□□ -1.83
SPG11-208ENST00000558155 RNASE11Q8TAA1 199 aaKnown RBP3.59□□□□□ -1.83
SPG11-208ENST00000558155 LHFPL5Q8TAF8 219 aa3.59□□□□□ -1.83
SPG11-208ENST00000558155 RNASEH2CQ8TDP1 164 aaKnown RBP3.59□□□□□ -1.83
SPG11-208ENST00000558155 RXFP4Q8TDU9 374 aa3.59□□□□□ -1.83
SPG11-208ENST00000558155 ZNF503Q96F45 646 aa3.59□□□□□ -1.83
SPG11-208ENST00000558155 RRNAD1Q96FB5 475 aaKnown RBP3.59□□□□□ -1.83
SPG11-208ENST00000558155 UPK3BQ9BT76 320 aa3.59□□□□□ -1.83
SPG11-208ENST00000558155 KRTAP1-5Q9BYS1 174 aa3.59□□□□□ -1.83
SPG11-208ENST00000558155 TXNL4BQ9NX01 149 aaKnown RBP3.59□□□□□ -1.83
SPG11-208ENST00000558155 ZNF586Q9NXT0 402 aa3.59□□□□□ -1.83
SPG11-208ENST00000558155 DOK5Q9P104 306 aa3.59□□□□□ -1.83
SPG11-208ENST00000558155 SSR3Q9UNL2 185 aa3.59□□□□□ -1.83
SPG11-208ENST00000558155 RAB19A4D1S5 217 aa3.58□□□□□ -1.84
SPG11-208ENST00000558155 F6UB75 175 aa3.58□□□□□ -1.84
SPG11-208ENST00000558155 H3BNG1 76 aa3.58□□□□□ -1.84
SPG11-208ENST00000558155 ADAP1O75689 374 aa3.58□□□□□ -1.84
SPG11-208ENST00000558155 DUSP14O95147 198 aaKnown RBP3.58□□□□□ -1.84
SPG11-208ENST00000558155 ATP6V1G2O95670 118 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms