RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 SULT1A3P0DMM9 295 aa3.41□□□□□ -1.86
ATXN3-239ENST00000556315 SULT1A4P0DMN0 295 aa3.41□□□□□ -1.86
ATXN3-239ENST00000556315 OR13C7P0DN81 318 aa3.41□□□□□ -1.86
ATXN3-239ENST00000556315 VPREB1P12018 145 aa3.41□□□□□ -1.86
ATXN3-239ENST00000556315 ELK1P19419 428 aa3.41□□□□□ -1.86
ATXN3-239ENST00000556315 RAB3BP20337 219 aa3.41□□□□□ -1.86
ATXN3-239ENST00000556315 RCVRNP35243 200 aa3.41□□□□□ -1.86
ATXN3-239ENST00000556315 NKX2-5P52952 324 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-239ENST00000556315 ERVFC1-1P60608 527 aa3.41□□□□□ -1.86
ATXN3-239ENST00000556315 RAB14P61106 215 aa3.41□□□□□ -1.86
ATXN3-239ENST00000556315 RPL36AP83881 106 aaKnown RBP3.41□□□□□ -1.86
ATXN3-239ENST00000556315 DHODHQ02127 395 aa3.41□□□□□ -1.86
ATXN3-239ENST00000556315 UBE2V1Q13404 147 aa3.41□□□□□ -1.86
ATXN3-239ENST00000556315 C2orf76Q3KRA6 126 aa3.41□□□□□ -1.86
ATXN3-239ENST00000556315 Q56UQ5 140 aa3.41□□□□□ -1.86
ATXN3-239ENST00000556315 OR2B11Q5JQS5 317 aa3.41□□□□□ -1.86
ATXN3-239ENST00000556315 CLLU1Q5K131 121 aa3.41□□□□□ -1.86
ATXN3-239ENST00000556315 IDNKQ5T6J7 187 aa3.41□□□□□ -1.86
ATXN3-239ENST00000556315 Q6ZS49 121 aa3.41□□□□□ -1.86
ATXN3-239ENST00000556315 Q75L30 129 aa3.41□□□□□ -1.86
ATXN3-239ENST00000556315 UBAC2Q8NBM4 344 aa3.41□□□□□ -1.86
ATXN3-239ENST00000556315 SUN5Q8TC36 379 aa3.41□□□□□ -1.86
ATXN3-239ENST00000556315 TCTEX1D2Q8WW35 142 aa3.41□□□□□ -1.86
ATXN3-239ENST00000556315 TMEM203Q969S6 136 aa3.41□□□□□ -1.86
ATXN3-239ENST00000556315 TXN2Q99757 166 aa3.41□□□□□ -1.86
ATXN3-239ENST00000556315 KCNK15Q9H427 330 aa3.41□□□□□ -1.86
ATXN3-239ENST00000556315 VSIRQ9H7M9 311 aa3.41□□□□□ -1.86
ATXN3-239ENST00000556315 HRASLSQ9HDD0 168 aa3.41□□□□□ -1.86
ATXN3-239ENST00000556315 CLEC5AQ9NY25 188 aa3.41□□□□□ -1.86
ATXN3-239ENST00000556315 TAS2R8Q9NYW2 309 aa3.41□□□□□ -1.86
ATXN3-239ENST00000556315 ELF5Q9UKW6 265 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-239ENST00000556315 KCNK7Q9Y2U2 307 aa3.41□□□□□ -1.86
ATXN3-239ENST00000556315 IGHV3OR16-13A0A075B7E8 117 aa3.4□□□□□ -1.87
ATXN3-239ENST00000556315 IGHV3-21A0A0B4J1V1 117 aa3.4□□□□□ -1.87
ATXN3-239ENST00000556315 IGHV3-74A0A0B4J1X5 117 aa3.4□□□□□ -1.87
ATXN3-239ENST00000556315 A0A0B4J293 547 aa3.4□□□□□ -1.87
ATXN3-239ENST00000556315 TEX50A0A1B0GTY4 177 aa3.4□□□□□ -1.87
ATXN3-239ENST00000556315 TEX48A0A1B0GUV7 120 aa3.4□□□□□ -1.87
ATXN3-239ENST00000556315 TMEM189A5PLL7 270 aa3.4□□□□□ -1.87
ATXN3-239ENST00000556315 SMIM9A6NGZ8 99 aa3.4□□□□□ -1.87
ATXN3-239ENST00000556315 GABARAPH6UMI1 98 aa3.4□□□□□ -1.87
ATXN3-239ENST00000556315 SLC17A2O00624 439 aa3.4□□□□□ -1.87
ATXN3-239ENST00000556315 ST8SIA3O43173 380 aa3.4□□□□□ -1.87
ATXN3-239ENST00000556315 BUB3O43684 328 aa3.4□□□□□ -1.87
ATXN3-239ENST00000556315 SERPINE2P07093 398 aa3.4□□□□□ -1.87
ATXN3-239ENST00000556315 GNB3P16520 340 aa3.4□□□□□ -1.87
ATXN3-239ENST00000556315 MT3P25713 68 aa3.4□□□□□ -1.87
ATXN3-239ENST00000556315 FAUP35544 74 aaKnown RBP3.4□□□□□ -1.87
ATXN3-239ENST00000556315 HTR2BP41595 481 aa3.4□□□□□ -1.87
ATXN3-239ENST00000556315 NUTF2P61970 127 aaKnown RBP3.4□□□□□ -1.87
ATXN3-239ENST00000556315 SNRPEP62304 92 aaKnown RBP3.4□□□□□ -1.87
ATXN3-239ENST00000556315 GAGE5Q13069 117 aa3.4□□□□□ -1.87
ATXN3-239ENST00000556315 GAGE6Q13070 117 aa3.4□□□□□ -1.87
ATXN3-239ENST00000556315 EIF4EBP1Q13541 118 aaPredicted RBP3.4□□□□□ -1.87
ATXN3-239ENST00000556315 UBE2NLQ5JXB2 153 aa3.4□□□□□ -1.87
ATXN3-239ENST00000556315 TEX261Q6UWH6 196 aa3.4□□□□□ -1.87
ATXN3-239ENST00000556315 LYPD1Q8N2G4 141 aa3.4□□□□□ -1.87
ATXN3-239ENST00000556315 C9orf62Q8N4C0 152 aa3.4□□□□□ -1.87
ATXN3-239ENST00000556315 FAM24BQ8N5W8 94 aa3.4□□□□□ -1.87
ATXN3-239ENST00000556315 SAMD12Q8N8I0 201 aa3.4□□□□□ -1.87
ATXN3-239ENST00000556315 OR10W1Q8NGF6 305 aa3.4□□□□□ -1.87
ATXN3-239ENST00000556315 OR52I2Q8NH67 350 aa3.4□□□□□ -1.87
ATXN3-239ENST00000556315 ZNF431Q8TF32 576 aaPredicted RBP3.4□□□□□ -1.87
ATXN3-239ENST00000556315 SMIM4Q8WVI0 70 aa3.4□□□□□ -1.87
ATXN3-239ENST00000556315 MAFIPQ8WZ33 124 aa3.4□□□□□ -1.87
ATXN3-239ENST00000556315 RAB3CQ96E17 227 aa3.4□□□□□ -1.87
ATXN3-239ENST00000556315 ZNF414Q96IQ9 312 aa3.4□□□□□ -1.87
ATXN3-239ENST00000556315 GINS3Q9BRX5 216 aa3.4□□□□□ -1.87
ATXN3-239ENST00000556315 ATG101Q9BSB4 218 aa3.4□□□□□ -1.87
ATXN3-239ENST00000556315 TMEM231Q9H6L2 316 aa3.4□□□□□ -1.87
ATXN3-239ENST00000556315 GPN1Q9HCN4 374 aaPredicted RBP3.4□□□□□ -1.87
ATXN3-239ENST00000556315 RABAC1Q9UI14 185 aa3.4□□□□□ -1.87
ATXN3-239ENST00000556315 RAB22AQ9UL26 194 aa3.4□□□□□ -1.87
ATXN3-239ENST00000556315 HSPB11Q9Y547 144 aa3.4□□□□□ -1.87
ATXN3-239ENST00000556315 F11RQ9Y624 299 aaKnown RBP3.4□□□□□ -1.87
ATXN3-239ENST00000556315 U3KQ87 197 aa3.4□□□□□ -1.87
ATXN3-239ENST00000556315 DMBT1Q9UGM3 2413 aaPredicted RBP3.4□□□□□ -1.87
ATXN3-239ENST00000556315 A0A0A6YYH2 397 aa3.39□□□□□ -1.87
ATXN3-239ENST00000556315 TRAV3A0A0B4J244 114 aa3.39□□□□□ -1.87
ATXN3-239ENST00000556315 LINC00854A0A1B0GVQ3 168 aa3.39□□□□□ -1.87
ATXN3-239ENST00000556315 A6NJ64 397 aa3.39□□□□□ -1.87
ATXN3-239ENST00000556315 KNCNA6PVL3 124 aa3.39□□□□□ -1.87
ATXN3-239ENST00000556315 HMSDA8MTL9 139 aa3.39□□□□□ -1.87
ATXN3-239ENST00000556315 K7EIM0 57 aa3.39□□□□□ -1.87
ATXN3-239ENST00000556315 K7EQG2 157 aa3.39□□□□□ -1.87
ATXN3-239ENST00000556315 SULT1C2O00338 296 aa3.39□□□□□ -1.87
ATXN3-239ENST00000556315 RBFOX2O43251 390 aaKnown RBP eCLIP3.39□□□□□ -1.87
ATXN3-239ENST00000556315 HPRT1P00492 218 aa3.39□□□□□ -1.87
ATXN3-239ENST00000556315 APOHP02749 345 aaPredicted RBP3.39□□□□□ -1.87
ATXN3-239ENST00000556315 GIPP09681 153 aaPredicted RBP3.39□□□□□ -1.87
ATXN3-239ENST00000556315 NQO2P16083 231 aa3.39□□□□□ -1.87
ATXN3-239ENST00000556315 NFYAP23511 347 aaPredicted RBP3.39□□□□□ -1.87
ATXN3-239ENST00000556315 BTCP35070 178 aa3.39□□□□□ -1.87
ATXN3-239ENST00000556315 HOXA1P49639 335 aaPredicted RBP3.39□□□□□ -1.87
ATXN3-239ENST00000556315 EMP1P54849 157 aa3.39□□□□□ -1.87
ATXN3-239ENST00000556315 TAS2R31P59538 309 aa3.39□□□□□ -1.87
ATXN3-239ENST00000556315 WT1-ASQ06250 92 aa3.39□□□□□ -1.87
ATXN3-239ENST00000556315 INSL4Q14641 139 aa3.39□□□□□ -1.87
ATXN3-239ENST00000556315 FCN2Q15485 313 aa3.39□□□□□ -1.87
ATXN3-239ENST00000556315 RAB11BQ15907 218 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms