RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 PGLYRP1O75594 196 aaPredicted RBP3.12□□□□□ -1.91
SNHG1-214ENST00000540865 CIB2O75838 187 aa3.12□□□□□ -1.91
SNHG1-214ENST00000540865 IGKV1-17P01599 117 aa3.12□□□□□ -1.91
SNHG1-214ENST00000540865 C1QBP02746 253 aa3.12□□□□□ -1.91
SNHG1-214ENST00000540865 PSMA1P25786 263 aaKnown RBP3.12□□□□□ -1.91
SNHG1-214ENST00000540865 CALRP27797 417 aaKnown RBP3.12□□□□□ -1.91
SNHG1-214ENST00000540865 SNCAP37840 140 aa3.12□□□□□ -1.91
SNHG1-214ENST00000540865 ID1P41134 155 aa3.12□□□□□ -1.91
SNHG1-214ENST00000540865 LPAR6P43657 344 aa3.12□□□□□ -1.91
SNHG1-214ENST00000540865 RPL5P46777 297 aaKnown RBP3.12□□□□□ -1.91
SNHG1-214ENST00000540865 RFX2P48378 723 aa3.12□□□□□ -1.91
SNHG1-214ENST00000540865 PSMB3P49720 205 aa3.12□□□□□ -1.91
SNHG1-214ENST00000540865 RORCP51449 518 aa3.12□□□□□ -1.91
SNHG1-214ENST00000540865 SUB1P53999 127 aaKnown RBP eCLIP3.12□□□□□ -1.91
SNHG1-214ENST00000540865 GNG2P59768 71 aa3.12□□□□□ -1.91
SNHG1-214ENST00000540865 DEFB1P60022 68 aa3.12□□□□□ -1.91
SNHG1-214ENST00000540865 RPS25P62851 125 aaKnown RBP3.12□□□□□ -1.91
SNHG1-214ENST00000540865 FCN2Q15485 313 aa3.12□□□□□ -1.91
SNHG1-214ENST00000540865 SPHARQ15513 63 aa3.12□□□□□ -1.91
SNHG1-214ENST00000540865 FAM78BQ5VT40 261 aa3.12□□□□□ -1.91
SNHG1-214ENST00000540865 MZT2BQ6NZ67 158 aa3.12□□□□□ -1.91
SNHG1-214ENST00000540865 EBLN2Q6P2I7 272 aa3.12□□□□□ -1.91
SNHG1-214ENST00000540865 SIGLEC15Q6ZMC9 328 aa3.12□□□□□ -1.91
SNHG1-214ENST00000540865 C9orf47Q6ZRZ4 202 aa3.12□□□□□ -1.91
SNHG1-214ENST00000540865 AHSA2Q719I0 299 aa3.12□□□□□ -1.91
SNHG1-214ENST00000540865 PRR26Q8N8Z3 221 aa3.12□□□□□ -1.91
SNHG1-214ENST00000540865 NEXN-AS1Q8NBZ9 246 aa3.12□□□□□ -1.91
SNHG1-214ENST00000540865 BPIFB6Q8NFQ5 453 aa3.12□□□□□ -1.91
SNHG1-214ENST00000540865 TSPAN14Q8NG11 270 aa3.12□□□□□ -1.91
SNHG1-214ENST00000540865 OR10J6PQ8NGY7 276 aa3.12□□□□□ -1.91
SNHG1-214ENST00000540865 OR4A16Q8NH70 328 aa3.12□□□□□ -1.91
SNHG1-214ENST00000540865 NUDCD2Q8WVJ2 157 aa3.12□□□□□ -1.91
SNHG1-214ENST00000540865 FCGR1BQ92637 280 aa3.12□□□□□ -1.91
SNHG1-214ENST00000540865 UFD1Q92890 307 aa3.12□□□□□ -1.91
SNHG1-214ENST00000540865 TMEM203Q969S6 136 aa3.12□□□□□ -1.91
SNHG1-214ENST00000540865 LINC00052Q96N35 136 aa3.12□□□□□ -1.91
SNHG1-214ENST00000540865 CCDC90BQ9GZT6 254 aa3.12□□□□□ -1.91
SNHG1-214ENST00000540865 ATG5Q9H1Y0 275 aa3.12□□□□□ -1.91
SNHG1-214ENST00000540865 PLCXD1Q9NUJ7 323 aa3.12□□□□□ -1.91
SNHG1-214ENST00000540865 MRPL36Q9P0J6 103 aaKnown RBP3.12□□□□□ -1.91
SNHG1-214ENST00000540865 LSM2Q9Y333 95 aaKnown RBP3.12□□□□□ -1.91
SNHG1-214ENST00000540865 IGLV5-52A0A0A0MRZ9 124 aa3.11□□□□□ -1.91
SNHG1-214ENST00000540865 A0A0J9YX75 114 aa3.11□□□□□ -1.91
SNHG1-214ENST00000540865 TMEM235A6NFC5 223 aa3.11□□□□□ -1.91
SNHG1-214ENST00000540865 PGPEP1LA6NFU8 196 aa3.11□□□□□ -1.91
SNHG1-214ENST00000540865 SOCS3O14543 225 aa3.11□□□□□ -1.91
SNHG1-214ENST00000540865 PDCD5O14737 125 aa3.11□□□□□ -1.91
SNHG1-214ENST00000540865 CASQ2O14958 399 aaPredicted RBP3.11□□□□□ -1.91
SNHG1-214ENST00000540865 ADAP1O75689 374 aa3.11□□□□□ -1.91
SNHG1-214ENST00000540865 SCGNO76038 276 aa3.11□□□□□ -1.91
SNHG1-214ENST00000540865 INSP01308 110 aa3.11□□□□□ -1.91
SNHG1-214ENST00000540865 IGLC1P0CG04 106 aa3.11□□□□□ -1.91
SNHG1-214ENST00000540865 PTHLHP12272 177 aa3.11□□□□□ -1.91
SNHG1-214ENST00000540865 AZU1P20160 251 aa3.11□□□□□ -1.91
SNHG1-214ENST00000540865 NUP62P37198 522 aaPredicted RBP3.11□□□□□ -1.91
SNHG1-214ENST00000540865 HSPA13P48723 471 aa3.11□□□□□ -1.91
SNHG1-214ENST00000540865 FXYD4P59646 89 aa3.11□□□□□ -1.91
SNHG1-214ENST00000540865 YPEL3P61236 119 aaPredicted RBP3.11□□□□□ -1.91
SNHG1-214ENST00000540865 DHODHQ02127 395 aa3.11□□□□□ -1.91
SNHG1-214ENST00000540865 OR5I1Q13606 314 aa3.11□□□□□ -1.91
SNHG1-214ENST00000540865 TIGITQ495A1 244 aa3.11□□□□□ -1.91
SNHG1-214ENST00000540865 SAMD13Q5VXD3 122 aa3.11□□□□□ -1.91
SNHG1-214ENST00000540865 LAIR2Q6ISS4 152 aa3.11□□□□□ -1.91
SNHG1-214ENST00000540865 AMTNQ6UX39 209 aa3.11□□□□□ -1.91
SNHG1-214ENST00000540865 NOXA1Q86UR1 476 aa3.11□□□□□ -1.91
SNHG1-214ENST00000540865 HOGA1Q86XE5 327 aa3.11□□□□□ -1.91
SNHG1-214ENST00000540865 CMTM1Q8IZ96 169 aa3.11□□□□□ -1.91
SNHG1-214ENST00000540865 BEST4Q8NFU0 473 aa3.11□□□□□ -1.91
SNHG1-214ENST00000540865 OR1S2Q8NGQ3 325 aa3.11□□□□□ -1.91
SNHG1-214ENST00000540865 OR6F1Q8NGZ6 308 aa3.11□□□□□ -1.91
SNHG1-214ENST00000540865 COQ8AQ8NI60 647 aa3.11□□□□□ -1.91
SNHG1-214ENST00000540865 TMEM170AQ8WVE7 144 aa3.11□□□□□ -1.91
SNHG1-214ENST00000540865 ACOT13Q9NPJ3 140 aa3.11□□□□□ -1.91
SNHG1-214ENST00000540865 FAM212BQ9NTI7 297 aaPredicted RBP3.11□□□□□ -1.91
SNHG1-214ENST00000540865 FKBP14Q9NWM8 211 aa3.11□□□□□ -1.91
SNHG1-214ENST00000540865 DOK5Q9P104 306 aa3.11□□□□□ -1.91
SNHG1-214ENST00000540865 KLK11Q9UBX7 282 aa3.11□□□□□ -1.91
SNHG1-214ENST00000540865 HSPB7Q9UBY9 170 aa3.11□□□□□ -1.91
SNHG1-214ENST00000540865 TIMM8BQ9Y5J9 83 aaPredicted RBP3.11□□□□□ -1.91
SNHG1-214ENST00000540865 TRAV9-2A0A087WT02 112 aa3.1□□□□□ -1.91
SNHG1-214ENST00000540865 TRAV1-2A0A0B4J238 106 aa3.1□□□□□ -1.91
SNHG1-214ENST00000540865 A0A0J9YY99 117 aa3.1□□□□□ -1.91
SNHG1-214ENST00000540865 F6UB75 175 aa3.1□□□□□ -1.91
SNHG1-214ENST00000540865 K7EP13 123 aa3.1□□□□□ -1.91
SNHG1-214ENST00000540865 ZNF701M0R085 212 aaPredicted RBP3.1□□□□□ -1.91
SNHG1-214ENST00000540865 ISLRO14498 428 aa3.1□□□□□ -1.91
SNHG1-214ENST00000540865 CRXO43186 299 aaPredicted RBP3.1□□□□□ -1.91
SNHG1-214ENST00000540865 ATP5HO75947 161 aa3.1□□□□□ -1.91
SNHG1-214ENST00000540865 PRM2P04554 102 aa3.1□□□□□ -1.91
SNHG1-214ENST00000540865 RLN1P04808 185 aa3.1□□□□□ -1.91
SNHG1-214ENST00000540865 IL4P05112 153 aa3.1□□□□□ -1.91
SNHG1-214ENST00000540865 RNASE2P10153 161 aaKnown RBP3.1□□□□□ -1.91
SNHG1-214ENST00000540865 OPRK1P41145 380 aa3.1□□□□□ -1.91
SNHG1-214ENST00000540865 ETV6P41212 452 aa3.1□□□□□ -1.91
SNHG1-214ENST00000540865 OR10A3P58181 314 aa3.1□□□□□ -1.91
SNHG1-214ENST00000540865 TAS2R60P59551 318 aa3.1□□□□□ -1.91
SNHG1-214ENST00000540865 HERV-K104P61576 105 aa3.1□□□□□ -1.91
SNHG1-214ENST00000540865 FABP5Q01469 135 aa3.1□□□□□ -1.91
SNHG1-214ENST00000540865 TBCEQ15813 527 aaPredicted RBP3.1□□□□□ -1.91
SNHG1-214ENST00000540865 DHRS11Q6UWP2 260 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms