RNA–Protein interactions for RNA: ENST00000532313.5

CSRP1-215, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 5,239 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-215ENST00000532313 ZNF138P52744 262 aa9.31□□□□□ -0.92
CSRP1-215ENST00000532313 MRPL54Q6P161 138 aaKnown RBP9.31□□□□□ -0.92
CSRP1-215ENST00000532313 A0A087WX48 190 aa9.31□□□□□ -0.92
CSRP1-215ENST00000532313 TRAV25A0A0B4J276 109 aa9.31□□□□□ -0.92
CSRP1-215ENST00000532313 C11orf42Q8N5U0 333 aa9.31□□□□□ -0.92
CSRP1-215ENST00000532313 NPBQ8NG41 125 aa9.31□□□□□ -0.92
CSRP1-215ENST00000532313 C2orf88Q9BSF0 95 aa9.31□□□□□ -0.92
CSRP1-215ENST00000532313 TRAV8-6A0A0B4J262 113 aa9.31□□□□□ -0.92
CSRP1-215ENST00000532313 TSTD3H0UI37 97 aa9.31□□□□□ -0.92
CSRP1-215ENST00000532313 HLA-DQA1P01909 254 aa9.31□□□□□ -0.92
CSRP1-215ENST00000532313 RNASE2P10153 161 aaKnown RBP9.31□□□□□ -0.92
CSRP1-215ENST00000532313 TFF3Q07654 80 aa9.31□□□□□ -0.92
CSRP1-215ENST00000532313 BTN1A1Q13410 526 aa9.31□□□□□ -0.92
CSRP1-215ENST00000532313 GEMIN7Q9H840 131 aaKnown RBP9.31□□□□□ -0.92
CSRP1-215ENST00000532313 ELOBQ15370 118 aa9.3□□□□□ -0.92
CSRP1-215ENST00000532313 FAM90A2PQ658T7 463 aa9.3□□□□□ -0.92
CSRP1-215ENST00000532313 DUX4L9Q6RFH8 374 aaPredicted RBP9.3□□□□□ -0.92
CSRP1-215ENST00000532313 GLMPQ8WWB7 406 aa9.3□□□□□ -0.92
CSRP1-215ENST00000532313 RMI2Q96E14 147 aa9.3□□□□□ -0.92
CSRP1-215ENST00000532313 GP9P14770 177 aa9.3□□□□□ -0.92
CSRP1-215ENST00000532313 NDUFA4L2Q9NRX3 87 aa9.3□□□□□ -0.92
CSRP1-215ENST00000532313 KLK5Q9Y337 293 aaPredicted RBP9.3□□□□□ -0.92
CSRP1-215ENST00000532313 LINC01549A6NIU2 74 aa9.3□□□□□ -0.92
CSRP1-215ENST00000532313 TMEM50AO95807 157 aa9.3□□□□□ -0.92
CSRP1-215ENST00000532313 Q6ZSR3 168 aa9.3□□□□□ -0.92
CSRP1-215ENST00000532313 RCC1LQ96I51 464 aaKnown RBP9.3□□□□□ -0.92
CSRP1-215ENST00000532313 RPL36AP83881 106 aaKnown RBP9.3□□□□□ -0.92
CSRP1-215ENST00000532313 PSG3Q16557 428 aa9.3□□□□□ -0.92
CSRP1-215ENST00000532313 POU2AF1Q16633 256 aa9.3□□□□□ -0.92
CSRP1-215ENST00000532313 MIR17HGQ75NE6 70 aa9.3□□□□□ -0.92
CSRP1-215ENST00000532313 RPL36ALQ969Q0 106 aaKnown RBP9.3□□□□□ -0.92
CSRP1-215ENST00000532313 LIME1Q9H400 295 aa9.3□□□□□ -0.92
CSRP1-215ENST00000532313 SMAD5-AS1Q9Y6J3 95 aa9.3□□□□□ -0.92
CSRP1-215ENST00000532313 OR2K2Q8NGT1 345 aa9.29□□□□□ -0.92
CSRP1-215ENST00000532313 TMEM14BQ9NUH8 114 aa9.29□□□□□ -0.92
CSRP1-215ENST00000532313 ARL2-SNX15V9GYD0 113 aa9.29□□□□□ -0.92
CSRP1-215ENST00000532313 FCN3O75636 299 aa9.29□□□□□ -0.92
CSRP1-215ENST00000532313 CA1P00915 261 aaPredicted RBP9.29□□□□□ -0.92
CSRP1-215ENST00000532313 CSN3P07498 182 aa9.29□□□□□ -0.92
CSRP1-215ENST00000532313 IGF2RP11717 2491 aa9.29□□□□□ -0.92
CSRP1-215ENST00000532313 FER1L6-AS1Q8NA97 138 aa9.29□□□□□ -0.92
CSRP1-215ENST00000532313 F2Z2F3 143 aa9.29□□□□□ -0.92
CSRP1-215ENST00000532313 ZNF253O75346 499 aa9.29□□□□□ -0.92
CSRP1-215ENST00000532313 BTF3P20290 206 aaKnown RBP9.29□□□□□ -0.92
CSRP1-215ENST00000532313 EPDR1Q9UM22 224 aa9.29□□□□□ -0.92
CSRP1-215ENST00000532313 HOXD3P31249 432 aaPredicted RBP9.29□□□□□ -0.92
CSRP1-215ENST00000532313 C11orf71Q6IPW1 123 aa9.29□□□□□ -0.92
CSRP1-215ENST00000532313 PTPN13Q12923 2485 aa9.29□□□□□ -0.92
CSRP1-215ENST00000532313 PHF3Q92576 2039 aaKnown RBP9.29□□□□□ -0.92
CSRP1-215ENST00000532313 MALRD1Q5VYJ5 2156 aa9.29□□□□□ -0.92
CSRP1-215ENST00000532313 Q6YL49 198 aa9.28□□□□□ -0.92
CSRP1-215ENST00000532313 PSG8Q9UQ74 426 aa9.28□□□□□ -0.92
CSRP1-215ENST00000532313 TRGV1A0A0A0MS02 117 aa9.28□□□□□ -0.92
CSRP1-215ENST00000532313 IGHV7-4-1A0A0J9YVY3 117 aa9.28□□□□□ -0.92
CSRP1-215ENST00000532313 NUDT3O95989 172 aa9.28□□□□□ -0.92
CSRP1-215ENST00000532313 AJUBAQ96IF1 538 aa9.28□□□□□ -0.92
CSRP1-215ENST00000532313 PCDH15Q96QU1 1955 aa9.28□□□□□ -0.92
CSRP1-215ENST00000532313 C4orf3Q8WVX3 66 aa9.28□□□□□ -0.92
CSRP1-215ENST00000532313 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.28□□□□□ -0.92
CSRP1-215ENST00000532313 GATA2P23769 480 aaPredicted RBP9.28□□□□□ -0.92
CSRP1-215ENST00000532313 MAP1LC3CQ9BXW4 147 aa9.28□□□□□ -0.92
CSRP1-215ENST00000532313 CADP27708 2225 aa9.28□□□□□ -0.92
CSRP1-215ENST00000532313 H3BQ15 152 aa9.28□□□□□ -0.92
CSRP1-215ENST00000532313 SNRNP200O75643 2136 aaKnown RBP9.28□□□□□ -0.92
CSRP1-215ENST00000532313 IGKV1-5P01602 117 aa9.28□□□□□ -0.92
CSRP1-215ENST00000532313 CFAP161Q6P656 301 aa9.28□□□□□ -0.92
CSRP1-215ENST00000532313 REC114Q7Z4M0 266 aa9.28□□□□□ -0.92
CSRP1-215ENST00000532313 TMEM191AQ9H0A3 160 aa9.28□□□□□ -0.92
CSRP1-215ENST00000532313 MED13Q9UHV7 2174 aa9.27□□□□□ -0.92
CSRP1-215ENST00000532313 ZFP36P26651 326 aaKnown RBP9.27□□□□□ -0.93
CSRP1-215ENST00000532313 NDPQ00604 133 aa9.27□□□□□ -0.93
CSRP1-215ENST00000532313 CIRBPQ14011 172 aaKnown RBP9.27□□□□□ -0.93
CSRP1-215ENST00000532313 TREML4Q6UXN2 200 aa9.27□□□□□ -0.93
CSRP1-215ENST00000532313 SHANK2-AS3Q9BTD1 123 aa9.27□□□□□ -0.93
CSRP1-215ENST00000532313 TRBV20OR9-2A0A075B6H5 130 aa9.27□□□□□ -0.93
CSRP1-215ENST00000532313 RHODO00212 210 aa9.27□□□□□ -0.93
CSRP1-215ENST00000532313 Q1RN00 199 aa9.27□□□□□ -0.93
CSRP1-215ENST00000532313 CENPWQ5EE01 88 aa9.27□□□□□ -0.93
CSRP1-215ENST00000532313 C8orf86Q6ZUL3 223 aa9.27□□□□□ -0.93
CSRP1-215ENST00000532313 SRRM4A7MD48 611 aaKnown RBP9.27□□□□□ -0.93
CSRP1-215ENST00000532313 C15orf62A8K5M9 175 aa9.27□□□□□ -0.93
CSRP1-215ENST00000532313 IER3P46695 156 aa9.27□□□□□ -0.93
CSRP1-215ENST00000532313 PGLYRP4Q96LB8 373 aa9.27□□□□□ -0.93
CSRP1-215ENST00000532313 ZNF106Q9H2Y7 1883 aaKnown RBP9.27□□□□□ -0.93
CSRP1-215ENST00000532313 HEATR5AQ86XA9 2040 aa9.27□□□□□ -0.93
CSRP1-215ENST00000532313 LOC102724200A0A096LPH7 203 aaPredicted RBP9.27□□□□□ -0.93
CSRP1-215ENST00000532313 H3BRM9 83 aa9.27□□□□□ -0.93
CSRP1-215ENST00000532313 SCO1O75880 301 aa9.27□□□□□ -0.93
CSRP1-215ENST00000532313 PKIGQ9Y2B9 76 aa9.27□□□□□ -0.93
CSRP1-215ENST00000532313 RPLP1P05386 114 aaKnown RBP9.26□□□□□ -0.93
CSRP1-215ENST00000532313 TMEM256Q8N2U0 113 aa9.26□□□□□ -0.93
CSRP1-215ENST00000532313 MEGF9Q9H1U4 602 aa9.26□□□□□ -0.93
CSRP1-215ENST00000532313 TRBV9A0A0B4J1U6 114 aa9.26□□□□□ -0.93
CSRP1-215ENST00000532313 TRAV3A0A0B4J244 114 aa9.26□□□□□ -0.93
CSRP1-215ENST00000532313 A6NDX4 124 aa9.26□□□□□ -0.93
CSRP1-215ENST00000532313 IGHG2P01859 326 aa9.26□□□□□ -0.93
CSRP1-215ENST00000532313 FBLN7Q53RD9 439 aa9.26□□□□□ -0.93
CSRP1-215ENST00000532313 MUC21Q5SSG8 566 aa9.26□□□□□ -0.93
CSRP1-215ENST00000532313 TMEM14EPQ6UXP3 125 aa9.26□□□□□ -0.93
CSRP1-215ENST00000532313 C9orf62Q8N4C0 152 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms