RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 C15orf61A6NNL5 157 aa5.91□□□□□ -1.46
CLIP1-205ENST00000514271 SERPINE2P07093 398 aa5.91□□□□□ -1.46
CLIP1-205ENST00000514271 SSBP2P81877 361 aaPredicted RBP5.91□□□□□ -1.46
CLIP1-205ENST00000514271 CLEC12BQ2HXU8 276 aa5.91□□□□□ -1.46
CLIP1-205ENST00000514271 RPEL1Q2QD12 228 aa5.91□□□□□ -1.46
CLIP1-205ENST00000514271 OCIAD2Q56VL3 154 aa5.91□□□□□ -1.46
CLIP1-205ENST00000514271 DGAT2L7PQ6IED9 249 aa5.91□□□□□ -1.46
CLIP1-205ENST00000514271 CST9LQ9H4G1 147 aa5.91□□□□□ -1.46
CLIP1-205ENST00000514271 RNF7Q9UBF6 113 aa5.91□□□□□ -1.46
CLIP1-205ENST00000514271 TP73-AS1Q9UF72 201 aa5.91□□□□□ -1.46
CLIP1-205ENST00000514271 PAM16Q9Y3D7 125 aa5.91□□□□□ -1.46
CLIP1-205ENST00000514271 SH2D7A6NKC9 451 aaPredicted RBP5.9□□□□□ -1.46
CLIP1-205ENST00000514271 RNF212BA8MTL3 300 aa5.9□□□□□ -1.46
CLIP1-205ENST00000514271 J3QLI3 93 aa5.9□□□□□ -1.46
CLIP1-205ENST00000514271 OR7C2O60412 319 aa5.9□□□□□ -1.46
CLIP1-205ENST00000514271 FCN3O75636 299 aa5.9□□□□□ -1.46
CLIP1-205ENST00000514271 IGHV4-39P01824 125 aa5.9□□□□□ -1.46
CLIP1-205ENST00000514271 HLA-DQA1P01909 254 aa5.9□□□□□ -1.46
CLIP1-205ENST00000514271 CRYGBP07316 175 aa5.9□□□□□ -1.46
CLIP1-205ENST00000514271 GPR6P46095 362 aaPredicted RBP5.9□□□□□ -1.46
CLIP1-205ENST00000514271 UNQ5815/PRO19632Q6UWF5 114 aa5.9□□□□□ -1.46
CLIP1-205ENST00000514271 COMMD2Q86X83 199 aa5.9□□□□□ -1.46
CLIP1-205ENST00000514271 THAP8Q8NA92 274 aa5.9□□□□□ -1.46
CLIP1-205ENST00000514271 OR4S2Q8NH73 311 aa5.9□□□□□ -1.46
CLIP1-205ENST00000514271 GFRA4Q9GZZ7 299 aa5.9□□□□□ -1.46
CLIP1-205ENST00000514271 IDI2-AS1Q9NZ38 188 aa5.9□□□□□ -1.46
CLIP1-205ENST00000514271 RELNP78509 3460 aa5.9□□□□□ -1.46
CLIP1-205ENST00000514271 TSPAN13O95857 204 aa5.9□□□□□ -1.46
CLIP1-205ENST00000514271 CRYBB3P26998 211 aa5.9□□□□□ -1.46
CLIP1-205ENST00000514271 SSTR5P35346 364 aa5.9□□□□□ -1.46
CLIP1-205ENST00000514271 KIR3DS1Q14943 382 aa5.9□□□□□ -1.46
CLIP1-205ENST00000514271 SPANXN5Q5MJ07 72 aa5.9□□□□□ -1.46
CLIP1-205ENST00000514271 WFDC3Q8IUB2 231 aa5.9□□□□□ -1.46
CLIP1-205ENST00000514271 JMJD8Q96S16 334 aa5.9□□□□□ -1.46
CLIP1-205ENST00000514271 HSD17B10Q99714 261 aaKnown RBP5.9□□□□□ -1.46
CLIP1-205ENST00000514271 NDFIP1Q9BT67 221 aa5.9□□□□□ -1.46
CLIP1-205ENST00000514271 HEATR1Q9H583 2144 aaKnown RBP5.9□□□□□ -1.46
CLIP1-205ENST00000514271 ZNF257Q9Y2Q1 563 aa5.9□□□□□ -1.46
CLIP1-205ENST00000514271 ATMQ13315 3056 aa5.9□□□□□ -1.46
CLIP1-205ENST00000514271 NBEAQ8NFP9 2946 aa5.9□□□□□ -1.47
CLIP1-205ENST00000514271 MORN5Q5VZ52 161 aa5.9□□□□□ -1.47
CLIP1-205ENST00000514271 TEX36Q5VZQ5 186 aa5.9□□□□□ -1.47
CLIP1-205ENST00000514271 LINC00322Q6ZN03 302 aaPredicted RBP5.9□□□□□ -1.47
CLIP1-205ENST00000514271 OR9G4Q8NGQ1 327 aa5.9□□□□□ -1.47
CLIP1-205ENST00000514271 GTSF1Q8WW33 167 aa5.9□□□□□ -1.47
CLIP1-205ENST00000514271 PIGCQ92535 297 aa5.9□□□□□ -1.47
CLIP1-205ENST00000514271 C18orf15Q96N68 181 aa5.9□□□□□ -1.47
CLIP1-205ENST00000514271 C19orf24Q9BVV8 132 aa5.9□□□□□ -1.47
CLIP1-205ENST00000514271 ZNF492Q9P255 531 aa5.9□□□□□ -1.47
CLIP1-205ENST00000514271 KAAG1Q9UBP8 84 aa5.9□□□□□ -1.47
CLIP1-205ENST00000514271 VPS13CQ709C8 3753 aa5.89□□□□□ -1.47
CLIP1-205ENST00000514271 IGHV1-24A0A0C4DH33 117 aa5.89□□□□□ -1.47
CLIP1-205ENST00000514271 LTAP01374 205 aa5.89□□□□□ -1.47
CLIP1-205ENST00000514271 FOXI2Q6ZQN5 318 aa5.89□□□□□ -1.47
CLIP1-205ENST00000514271 ZNF329Q86UD4 541 aa5.89□□□□□ -1.47
CLIP1-205ENST00000514271 OR2Z1Q8NG97 314 aa5.89□□□□□ -1.47
CLIP1-205ENST00000514271 OR10P1Q8NGE3 313 aa5.89□□□□□ -1.47
CLIP1-205ENST00000514271 ANKHD1Q8IWZ3 2542 aaKnown RBP5.89□□□□□ -1.47
CLIP1-205ENST00000514271 FAM231BA6NCW3 169 aa5.89□□□□□ -1.47
CLIP1-205ENST00000514271 USF1P22415 310 aaPredicted RBP5.89□□□□□ -1.47
CLIP1-205ENST00000514271 LINC00205P59089 165 aa5.89□□□□□ -1.47
CLIP1-205ENST00000514271 C17orf58Q2M2W7 97 aa5.89□□□□□ -1.47
CLIP1-205ENST00000514271 PATE2Q6UY27 113 aa5.89□□□□□ -1.47
CLIP1-205ENST00000514271 CHCHD1Q96BP2 118 aaKnown RBP5.89□□□□□ -1.47
CLIP1-205ENST00000514271 FXYD5Q96DB9 178 aa5.89□□□□□ -1.47
CLIP1-205ENST00000514271 WNT10AQ9GZT5 417 aa5.89□□□□□ -1.47
CLIP1-205ENST00000514271 FAM234AQ9H0X4 552 aa5.89□□□□□ -1.47
CLIP1-205ENST00000514271 TRAV3A0A0B4J244 114 aa5.89□□□□□ -1.47
CLIP1-205ENST00000514271 TMEM178BH3BS89 294 aa5.89□□□□□ -1.47
CLIP1-205ENST00000514271 TNFRSF13BO14836 293 aaPredicted RBP5.89□□□□□ -1.47
CLIP1-205ENST00000514271 RS1O15537 224 aa5.89□□□□□ -1.47
CLIP1-205ENST00000514271 CD5LO43866 347 aa5.89□□□□□ -1.47
CLIP1-205ENST00000514271 PRDX2P32119 198 aa5.89□□□□□ -1.47
CLIP1-205ENST00000514271 KRTAP10-9P60411 292 aa5.89□□□□□ -1.47
CLIP1-205ENST00000514271 C2orf83Q53S99 150 aa5.89□□□□□ -1.47
CLIP1-205ENST00000514271 CENPWQ5EE01 88 aa5.89□□□□□ -1.47
CLIP1-205ENST00000514271 ZNF493Q6ZR52 646 aa5.89□□□□□ -1.47
CLIP1-205ENST00000514271 STPG3Q8N7X2 389 aa5.89□□□□□ -1.47
CLIP1-205ENST00000514271 NUP35Q8NFH5 326 aa5.89□□□□□ -1.47
CLIP1-205ENST00000514271 CSDC2Q9Y534 153 aaKnown RBP5.89□□□□□ -1.47
CLIP1-205ENST00000514271 IGHG4P01861 327 aa5.88□□□□□ -1.47
CLIP1-205ENST00000514271 GATA2P23769 480 aaPredicted RBP5.88□□□□□ -1.47
CLIP1-205ENST00000514271 MSMPQ1L6U9 139 aa5.88□□□□□ -1.47
CLIP1-205ENST00000514271 TMEM30BQ3MIR4 351 aa5.88□□□□□ -1.47
CLIP1-205ENST00000514271 ACP7Q6ZNF0 438 aa5.88□□□□□ -1.47
CLIP1-205ENST00000514271 SLC25A33Q9BSK2 321 aa5.88□□□□□ -1.47
CLIP1-205ENST00000514271 SRRM5B3KS81 715 aa5.88□□□□□ -1.47
CLIP1-205ENST00000514271 HMGB3O15347 200 aaKnown RBP5.88□□□□□ -1.47
CLIP1-205ENST00000514271 FCGR2BP31994 310 aaPredicted RBP5.88□□□□□ -1.47
CLIP1-205ENST00000514271 PLP1P60201 277 aa5.88□□□□□ -1.47
CLIP1-205ENST00000514271 CD177Q8N6Q3 437 aa5.88□□□□□ -1.47
CLIP1-205ENST00000514271 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.88□□□□□ -1.47
CLIP1-205ENST00000514271 ITLN1Q8WWA0 313 aa5.88□□□□□ -1.47
CLIP1-205ENST00000514271 TMEM190Q8WZ59 177 aa5.88□□□□□ -1.47
CLIP1-205ENST00000514271 MAP1LC3CQ9BXW4 147 aa5.88□□□□□ -1.47
CLIP1-205ENST00000514271 AKAP9Q99996 3911 aa5.87□□□□□ -1.47
CLIP1-205ENST00000514271 TRAV8-6A0A0B4J262 113 aa5.87□□□□□ -1.47
CLIP1-205ENST00000514271 TRAPPC2LH3BP13 241 aa5.87□□□□□ -1.47
CLIP1-205ENST00000514271 SPRY3O43610 288 aa5.87□□□□□ -1.47
CLIP1-205ENST00000514271 HBZP02008 142 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms