RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 SHANK2-AS3Q9BTD1 123 aa17.18■□□□□ 0.34
PTPN13-205ENST00000502971 ABCA1O95477 2261 aa17.17■□□□□ 0.34
PTPN13-205ENST00000502971 OR2T8A6NH00 312 aa17.17■□□□□ 0.34
PTPN13-205ENST00000502971 IGHV3-23P01764 117 aa17.17■□□□□ 0.34
PTPN13-205ENST00000502971 MT-ND4LP03901 98 aa17.17■□□□□ 0.34
PTPN13-205ENST00000502971 CTSGP08311 255 aa17.17■□□□□ 0.34
PTPN13-205ENST00000502971 GP9P14770 177 aa17.17■□□□□ 0.34
PTPN13-205ENST00000502971 ZNF343Q6P1L6 599 aa17.17■□□□□ 0.34
PTPN13-205ENST00000502971 H3BRN7 92 aa17.16■□□□□ 0.34
PTPN13-205ENST00000502971 RNF212Q495C1 297 aa17.16■□□□□ 0.34
PTPN13-205ENST00000502971 EEF1AKMT3Q96AZ1 226 aa17.16■□□□□ 0.34
PTPN13-205ENST00000502971 TCEAL7Q9BRU2 100 aa17.16■□□□□ 0.34
PTPN13-205ENST00000502971 CLDN34H7C241 214 aa17.16■□□□□ 0.34
PTPN13-205ENST00000502971 BRI3O95415 125 aa17.16■□□□□ 0.34
PTPN13-205ENST00000502971 NBEAP1P0C6P0 100 aa17.16■□□□□ 0.34
PTPN13-205ENST00000502971 CRYBB3P26998 211 aa17.16■□□□□ 0.34
PTPN13-205ENST00000502971 IER3P46695 156 aa17.16■□□□□ 0.34
PTPN13-205ENST00000502971 LINC01551Q86U37 167 aa17.16■□□□□ 0.34
PTPN13-205ENST00000502971 OR5R1Q8NH85 324 aa17.16■□□□□ 0.34
PTPN13-205ENST00000502971 HIST1H2BAQ96A08 127 aa17.16■□□□□ 0.34
PTPN13-205ENST00000502971 YPEL4Q96NS1 127 aa17.16■□□□□ 0.34
PTPN13-205ENST00000502971 TRBV7-1A0A0A6YYK4 115 aa17.15■□□□□ 0.34
PTPN13-205ENST00000502971 FAM223BA6NKX1 122 aa17.15■□□□□ 0.34
PTPN13-205ENST00000502971 C9JCJ5 164 aa17.15■□□□□ 0.34
PTPN13-205ENST00000502971 ATF4P18848 351 aaPredicted RBP17.15■□□□□ 0.34
PTPN13-205ENST00000502971 LEMD1Q68G75 181 aa17.15■□□□□ 0.34
PTPN13-205ENST00000502971 FAM223AQ8IWN6 122 aa17.15■□□□□ 0.34
PTPN13-205ENST00000502971 ATP6V0BQ99437 205 aa17.15■□□□□ 0.34
PTPN13-205ENST00000502971 ELOVL1Q9BW60 279 aa17.15■□□□□ 0.34
PTPN13-205ENST00000502971 LY96Q9Y6Y9 160 aa17.15■□□□□ 0.34
PTPN13-205ENST00000502971 H3BUA1 57 aa17.14■□□□□ 0.33
PTPN13-205ENST00000502971 RPL35P42766 123 aaKnown RBP17.14■□□□□ 0.33
PTPN13-205ENST00000502971 ZNF329Q86UD4 541 aa17.14■□□□□ 0.33
PTPN13-205ENST00000502971 FAM24BQ8N5W8 94 aa17.14■□□□□ 0.33
PTPN13-205ENST00000502971 ANAPC16Q96DE5 110 aa17.14■□□□□ 0.33
PTPN13-205ENST00000502971 HELTA6NFD8 242 aa17.13■□□□□ 0.33
PTPN13-205ENST00000502971 MYCNOSP40205 109 aa17.13■□□□□ 0.33
PTPN13-205ENST00000502971 BLCAPP62952 87 aa17.13■□□□□ 0.33
PTPN13-205ENST00000502971 ATP5G2Q06055 141 aa17.13■□□□□ 0.33
PTPN13-205ENST00000502971 USF2Q15853 346 aaPredicted RBP17.13■□□□□ 0.33
PTPN13-205ENST00000502971 ZNF600Q6ZNG1 722 aa17.13■□□□□ 0.33
PTPN13-205ENST00000502971 C2CD4CQ8TF44 421 aa17.13■□□□□ 0.33
PTPN13-205ENST00000502971 MS4A10Q96PG2 267 aa17.13■□□□□ 0.33
PTPN13-205ENST00000502971 CHRDL1Q9BU40 450 aa17.13■□□□□ 0.33
PTPN13-205ENST00000502971 RNF24Q9Y225 148 aa17.13■□□□□ 0.33
PTPN13-205ENST00000502971 TRBV20OR9-2A0A075B6H5 130 aa17.13■□□□□ 0.33
PTPN13-205ENST00000502971 AP4M1O00189 453 aa17.13■□□□□ 0.33
PTPN13-205ENST00000502971 IGHV4-59P01825 116 aa17.13■□□□□ 0.33
PTPN13-205ENST00000502971 HIST1H1EP10412 219 aaKnown RBP17.13■□□□□ 0.33
PTPN13-205ENST00000502971 FOLR2P14207 255 aa17.13■□□□□ 0.33
PTPN13-205ENST00000502971 S100A7P31151 101 aa17.13■□□□□ 0.33
PTPN13-205ENST00000502971 ADMP35318 185 aa17.13■□□□□ 0.33
PTPN13-205ENST00000502971 BPIFA4PQ86YQ2 179 aa17.13■□□□□ 0.33
PTPN13-205ENST00000502971 LINC00527Q9UJ94 153 aa17.13■□□□□ 0.33
PTPN13-205ENST00000502971 ZNF580Q9UK33 172 aa17.13■□□□□ 0.33
PTPN13-205ENST00000502971 SVEP1Q4LDE5 3571 aa17.12■□□□□ 0.33
PTPN13-205ENST00000502971 CLEC3BP05452 202 aa17.12■□□□□ 0.33
PTPN13-205ENST00000502971 CD99P14209 185 aa17.12■□□□□ 0.33
PTPN13-205ENST00000502971 GPR183P32249 361 aa17.12■□□□□ 0.33
PTPN13-205ENST00000502971 BLNKQ8WV28 456 aa17.12■□□□□ 0.33
PTPN13-205ENST00000502971 ITPR3Q14573 2671 aa17.11■□□□□ 0.33
PTPN13-205ENST00000502971 PPIFP30405 207 aaKnown RBP17.11■□□□□ 0.33
PTPN13-205ENST00000502971 RANP62826 216 aaKnown RBP17.11■□□□□ 0.33
PTPN13-205ENST00000502971 ELOBQ15370 118 aa17.11■□□□□ 0.33
PTPN13-205ENST00000502971 Q6YL49 198 aa17.11■□□□□ 0.33
PTPN13-205ENST00000502971 TMEM190Q8WZ59 177 aa17.11■□□□□ 0.33
PTPN13-205ENST00000502971 CCDC140Q96MF4 163 aa17.11■□□□□ 0.33
PTPN13-205ENST00000502971 ZNF98A6NK75 572 aa17.1■□□□□ 0.33
PTPN13-205ENST00000502971 OCC1Q8TAD7 63 aa17.1■□□□□ 0.33
PTPN13-205ENST00000502971 H7BYZ3 331 aa17.1■□□□□ 0.33
PTPN13-205ENST00000502971 TRGV3P03979 118 aa17.1■□□□□ 0.33
PTPN13-205ENST00000502971 CRYBA1P05813 215 aa17.1■□□□□ 0.33
PTPN13-205ENST00000502971 RAB5AP20339 215 aa17.1■□□□□ 0.33
PTPN13-205ENST00000502971 TEX29Q8N6K0 151 aa17.1■□□□□ 0.33
PTPN13-205ENST00000502971 OR4F17Q8NGA8 305 aa17.1■□□□□ 0.33
PTPN13-205ENST00000502971 BMPR1BO00238 502 aa17.09■□□□□ 0.33
PTPN13-205ENST00000502971 PPP1R2P9O14990 202 aa17.09■□□□□ 0.33
PTPN13-205ENST00000502971 TGOLN2O43493 480 aa17.09■□□□□ 0.33
PTPN13-205ENST00000502971 GNG4P50150 75 aa17.09■□□□□ 0.33
PTPN13-205ENST00000502971 TAS2R60P59551 318 aa17.09■□□□□ 0.33
PTPN13-205ENST00000502971 CLEC19AQ6UXS0 136 aa17.09■□□□□ 0.33
PTPN13-205ENST00000502971 PRDM13Q9H4Q3 707 aa17.09■□□□□ 0.33
PTPN13-205ENST00000502971 ZNF586Q9NXT0 402 aa17.09■□□□□ 0.33
PTPN13-205ENST00000502971 RABAC1Q9UI14 185 aa17.09■□□□□ 0.33
PTPN13-205ENST00000502971 PGPA6NDG6 321 aa17.08■□□□□ 0.32
PTPN13-205ENST00000502971 PGPEP1LA6NFU8 196 aa17.08■□□□□ 0.32
PTPN13-205ENST00000502971 PEX7O00628 323 aa17.08■□□□□ 0.32
PTPN13-205ENST00000502971 CIARTQ8N365 385 aaPredicted RBP17.08■□□□□ 0.32
PTPN13-205ENST00000502971 USMG5Q96IX5 58 aa17.08■□□□□ 0.32
PTPN13-205ENST00000502971 NOL4LQ96MY1 436 aaPredicted RBP17.08■□□□□ 0.32
PTPN13-205ENST00000502971 VPREB3Q9UKI3 123 aa17.08■□□□□ 0.32
PTPN13-205ENST00000502971 EPDR1Q9UM22 224 aa17.08■□□□□ 0.32
PTPN13-205ENST00000502971 SNRPCP09234 159 aaKnown RBP17.07■□□□□ 0.32
PTPN13-205ENST00000502971 CNN1P51911 297 aaKnown RBP17.07■□□□□ 0.32
PTPN13-205ENST00000502971 CENPWQ5EE01 88 aa17.07■□□□□ 0.32
PTPN13-205ENST00000502971 Q6ZS46 218 aa17.07■□□□□ 0.32
PTPN13-205ENST00000502971 Q9H3A6 140 aa17.07■□□□□ 0.32
PTPN13-205ENST00000502971 OTORQ9NRC9 128 aa17.07■□□□□ 0.32
PTPN13-205ENST00000502971 AURKAIP1Q9NWT8 199 aaPredicted RBP17.07■□□□□ 0.32
PTPN13-205ENST00000502971 URGCP-MRPS24S4R325 110 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms