RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 HIST2H2BEQ16778 126 aa3.92□□□□□ -1.78
BRCA1-224ENST00000497488 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.92□□□□□ -1.78
BRCA1-224ENST00000497488 LYRM7Q5U5X0 104 aa3.92□□□□□ -1.78
BRCA1-224ENST00000497488 RPL13AP3Q6NVV1 102 aa3.92□□□□□ -1.78
BRCA1-224ENST00000497488 C22orf39Q6P5X5 142 aa3.92□□□□□ -1.78
BRCA1-224ENST00000497488 C16orf47Q6ZP98 133 aaPredicted RBP3.92□□□□□ -1.78
BRCA1-224ENST00000497488 SPATA12Q7Z6I5 190 aa3.92□□□□□ -1.78
BRCA1-224ENST00000497488 ZNF709Q8N972 641 aa3.92□□□□□ -1.78
BRCA1-224ENST00000497488 HIST1H2BHQ93079 126 aa3.92□□□□□ -1.78
BRCA1-224ENST00000497488 HIST1H2BAQ96A08 127 aa3.92□□□□□ -1.78
BRCA1-224ENST00000497488 HIST1H2BNQ99877 126 aa3.92□□□□□ -1.78
BRCA1-224ENST00000497488 HIST1H2BMQ99879 126 aa3.92□□□□□ -1.78
BRCA1-224ENST00000497488 C11orf1Q9H5F2 150 aa3.92□□□□□ -1.78
BRCA1-224ENST00000497488 RNF122Q9H9V4 155 aa3.92□□□□□ -1.78
BRCA1-224ENST00000497488 COPZ2Q9P299 210 aa3.92□□□□□ -1.78
BRCA1-224ENST00000497488 HS3ST2Q9Y278 367 aa3.92□□□□□ -1.78
BRCA1-224ENST00000497488 OTOGLQ3ZCN5 2332 aa3.92□□□□□ -1.78
BRCA1-224ENST00000497488 PCDH15Q96QU1 1955 aa3.91□□□□□ -1.78
BRCA1-224ENST00000497488 TRBV24-1A0A075B6N3 115 aa3.91□□□□□ -1.78
BRCA1-224ENST00000497488 TRAV38-1A0A0B4J264 116 aa3.91□□□□□ -1.78
BRCA1-224ENST00000497488 TMEM189A5PLL7 270 aa3.91□□□□□ -1.78
BRCA1-224ENST00000497488 CYSRT1A8MQ03 144 aa3.91□□□□□ -1.78
BRCA1-224ENST00000497488 H3BMM0 161 aa3.91□□□□□ -1.78
BRCA1-224ENST00000497488 K7EP13 123 aa3.91□□□□□ -1.78
BRCA1-224ENST00000497488 UBE2L6O14933 153 aa3.91□□□□□ -1.78
BRCA1-224ENST00000497488 BET1O15155 118 aa3.91□□□□□ -1.78
BRCA1-224ENST00000497488 SLC25A20O43772 301 aa3.91□□□□□ -1.78
BRCA1-224ENST00000497488 CST8O60676 142 aa3.91□□□□□ -1.78
BRCA1-224ENST00000497488 CA5AP35218 305 aa3.91□□□□□ -1.78
BRCA1-224ENST00000497488 MPV17P39210 176 aa3.91□□□□□ -1.78
BRCA1-224ENST00000497488 LPAR6P43657 344 aa3.91□□□□□ -1.78
BRCA1-224ENST00000497488 GABRA2P47869 451 aa3.91□□□□□ -1.78
BRCA1-224ENST00000497488 ZNF80P51504 273 aaPredicted RBP3.91□□□□□ -1.78
BRCA1-224ENST00000497488 KRTAP1-1Q07627 177 aa3.91□□□□□ -1.78
BRCA1-224ENST00000497488 RPL22L1Q6P5R6 122 aaKnown RBP3.91□□□□□ -1.78
BRCA1-224ENST00000497488 SLC25A34Q6PIV7 304 aa3.91□□□□□ -1.78
BRCA1-224ENST00000497488 LCA10Q71F78 164 aa3.91□□□□□ -1.78
BRCA1-224ENST00000497488 KTN1-AS1Q86SY8 53 aa3.91□□□□□ -1.78
BRCA1-224ENST00000497488 ZNF433Q8N7K0 673 aaPredicted RBP3.91□□□□□ -1.78
BRCA1-224ENST00000497488 RPS4Y2Q8TD47 263 aa3.91□□□□□ -1.78
BRCA1-224ENST00000497488 UBE2WQ96B02 151 aa3.91□□□□□ -1.78
BRCA1-224ENST00000497488 SEC22CQ9BRL7 303 aa3.91□□□□□ -1.78
BRCA1-224ENST00000497488 OR2J1Q9GZK6 312 aa3.91□□□□□ -1.78
BRCA1-224ENST00000497488 PCTPQ9UKL6 214 aa3.91□□□□□ -1.78
BRCA1-224ENST00000497488 SNX12Q9UMY4 172 aa3.91□□□□□ -1.78
BRCA1-224ENST00000497488 FUT9Q9Y231 359 aa3.91□□□□□ -1.78
BRCA1-224ENST00000497488 ZNF835Q9Y2P0 537 aa3.91□□□□□ -1.78
BRCA1-224ENST00000497488 ICOSQ9Y6W8 199 aa3.91□□□□□ -1.78
BRCA1-224ENST00000497488 SVILO95425 2214 aa3.91□□□□□ -1.78
BRCA1-224ENST00000497488 ANKRD12Q6UB98 2062 aa3.91□□□□□ -1.78
BRCA1-224ENST00000497488 MYO18AQ92614 2054 aaKnown RBP3.9□□□□□ -1.78
BRCA1-224ENST00000497488 TRAPPC2LH3BP13 241 aa3.9□□□□□ -1.79
BRCA1-224ENST00000497488 NDUFB2O95178 105 aa3.9□□□□□ -1.79
BRCA1-224ENST00000497488 PRM2P04554 102 aa3.9□□□□□ -1.79
BRCA1-224ENST00000497488 DBIP07108 87 aaKnown RBP3.9□□□□□ -1.79
BRCA1-224ENST00000497488 CCL3P10147 92 aa3.9□□□□□ -1.79
BRCA1-224ENST00000497488 OGNP20774 298 aaKnown RBP3.9□□□□□ -1.79
BRCA1-224ENST00000497488 CSN1S1P47710 185 aa3.9□□□□□ -1.79
BRCA1-224ENST00000497488 ZNF79Q15937 498 aa3.9□□□□□ -1.79
BRCA1-224ENST00000497488 AADACL3Q5VUY0 350 aa3.9□□□□□ -1.79
BRCA1-224ENST00000497488 ABCA7Q8IZY2 2146 aa3.9□□□□□ -1.79
BRCA1-224ENST00000497488 OR5C1Q8NGR4 320 aa3.9□□□□□ -1.79
BRCA1-224ENST00000497488 FNDC9Q8TBE3 224 aa3.9□□□□□ -1.79
BRCA1-224ENST00000497488 DNAJC9Q8WXX5 260 aa3.9□□□□□ -1.79
BRCA1-224ENST00000497488 CARD19Q96LW7 228 aa3.9□□□□□ -1.79
BRCA1-224ENST00000497488 UPK3BQ9BT76 320 aa3.9□□□□□ -1.79
BRCA1-224ENST00000497488 IL36BQ9NZH7 164 aa3.9□□□□□ -1.79
BRCA1-224ENST00000497488 OR5V1Q9UGF6 321 aa3.9□□□□□ -1.79
BRCA1-224ENST00000497488 HSPB8Q9UJY1 196 aa3.9□□□□□ -1.79
BRCA1-224ENST00000497488 TRAPPC1Q9Y5R8 145 aa3.9□□□□□ -1.79
BRCA1-224ENST00000497488 THADAQ6YHU6 1953 aa3.9□□□□□ -1.79
BRCA1-224ENST00000497488 PLXNA2O75051 1894 aa3.9□□□□□ -1.79
BRCA1-224ENST00000497488 GVINP1Q7Z2Y8 2422 aa3.9□□□□□ -1.79
BRCA1-224ENST00000497488 WDR87Q6ZQQ6 2873 aa3.89□□□□□ -1.79
BRCA1-224ENST00000497488 ZNF292O60281 2723 aa3.89□□□□□ -1.79
BRCA1-224ENST00000497488 DOCK4Q8N1I0 1966 aa3.89□□□□□ -1.79
BRCA1-224ENST00000497488 IGKV1OR2-108A0A075B7D4 117 aa3.89□□□□□ -1.79
BRCA1-224ENST00000497488 A8MUU9 505 aa3.89□□□□□ -1.79
BRCA1-224ENST00000497488 LINC00587B1AMM8 73 aa3.89□□□□□ -1.79
BRCA1-224ENST00000497488 ZNF73O43830 326 aaPredicted RBP3.89□□□□□ -1.79
BRCA1-224ENST00000497488 SULT1C4O75897 302 aa3.89□□□□□ -1.79
BRCA1-224ENST00000497488 PROSCO94903 275 aa3.89□□□□□ -1.79
BRCA1-224ENST00000497488 C1QCP02747 245 aa3.89□□□□□ -1.79
BRCA1-224ENST00000497488 RPL27AP46776 148 aaKnown RBP3.89□□□□□ -1.79
BRCA1-224ENST00000497488 NDUFA5Q16718 116 aa3.89□□□□□ -1.79
BRCA1-224ENST00000497488 GFI1BQ5VTD9 330 aa3.89□□□□□ -1.79
BRCA1-224ENST00000497488 NCBP2-AS2Q69YL0 99 aa3.89□□□□□ -1.79
BRCA1-224ENST00000497488 RASL11AQ6T310 242 aa3.89□□□□□ -1.79
BRCA1-224ENST00000497488 DEFB124Q8NES8 71 aa3.89□□□□□ -1.79
BRCA1-224ENST00000497488 OR5A1Q8NGJ0 315 aa3.89□□□□□ -1.79
BRCA1-224ENST00000497488 DERL1Q9BUN8 251 aa3.89□□□□□ -1.79
BRCA1-224ENST00000497488 RTL8AQ9BWD3 113 aa3.89□□□□□ -1.79
BRCA1-224ENST00000497488 LAMTOR2Q9Y2Q5 125 aa3.89□□□□□ -1.79
BRCA1-224ENST00000497488 MED31Q9Y3C7 131 aa3.89□□□□□ -1.79
BRCA1-224ENST00000497488 KIF25-AS1Q9Y6Z4 181 aa3.89□□□□□ -1.79
BRCA1-224ENST00000497488 U3KQK5 164 aa3.89□□□□□ -1.79
BRCA1-224ENST00000497488 TDRD6O60522 2096 aaKnown RBP3.89□□□□□ -1.79
BRCA1-224ENST00000497488 NUMA1Q14980 2115 aa3.89□□□□□ -1.79
BRCA1-224ENST00000497488 ADAMTS9Q9P2N4 1935 aa3.89□□□□□ -1.79
BRCA1-224ENST00000497488 NUP205Q92621 2012 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms