RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 STPG3Q8N7X2 389 aa14.73□□□□□ -0.05
TSPAN4-212ENST00000494815 PAM16Q9Y3D7 125 aa14.73□□□□□ -0.05
TSPAN4-212ENST00000494815 UTP20O75691 2785 aaKnown RBP14.72□□□□□ -0.05
TSPAN4-212ENST00000494815 AREGP15514 252 aa14.72□□□□□ -0.05
TSPAN4-212ENST00000494815 SAA4P35542 130 aa14.72□□□□□ -0.05
TSPAN4-212ENST00000494815 C5orf64Q2M2E5 130 aa14.72□□□□□ -0.05
TSPAN4-212ENST00000494815 VN1R17PQ8TDU5 208 aa14.72□□□□□ -0.05
TSPAN4-212ENST00000494815 SSMEM1Q8WWF3 244 aa14.72□□□□□ -0.05
TSPAN4-212ENST00000494815 AJUBAQ96IF1 538 aa14.72□□□□□ -0.05
TSPAN4-212ENST00000494815 DNAJC4Q9NNZ3 241 aa14.72□□□□□ -0.05
TSPAN4-212ENST00000494815 SLC45A2Q9UMX9 530 aa14.72□□□□□ -0.05
TSPAN4-212ENST00000494815 ABCA2Q9BZC7 2435 aa14.71□□□□□ -0.05
TSPAN4-212ENST00000494815 NPFFO15130 113 aa14.71□□□□□ -0.05
TSPAN4-212ENST00000494815 MT-CO2P00403 227 aa14.71□□□□□ -0.05
TSPAN4-212ENST00000494815 CD24P25063 80 aa14.71□□□□□ -0.05
TSPAN4-212ENST00000494815 RHOBP62745 196 aa14.71□□□□□ -0.05
TSPAN4-212ENST00000494815 UHRF2Q96PU4 802 aa14.71□□□□□ -0.05
TSPAN4-212ENST00000494815 SAMD10Q9BYL1 202 aa14.71□□□□□ -0.05
TSPAN4-212ENST00000494815 GSX1Q9H4S2 264 aaPredicted RBP14.71□□□□□ -0.05
TSPAN4-212ENST00000494815 IGKV1OR2-108A0A075B7D4 117 aa14.71□□□□□ -0.05
TSPAN4-212ENST00000494815 SNURFLB1AK76 121 aa14.71□□□□□ -0.05
TSPAN4-212ENST00000494815 CORTO00230 105 aa14.71□□□□□ -0.05
TSPAN4-212ENST00000494815 REG1AP05451 166 aa14.71□□□□□ -0.05
TSPAN4-212ENST00000494815 SLC25A16P16260 332 aa14.71□□□□□ -0.05
TSPAN4-212ENST00000494815 IER3P46695 156 aa14.71□□□□□ -0.05
TSPAN4-212ENST00000494815 MLANAQ16655 118 aa14.71□□□□□ -0.05
TSPAN4-212ENST00000494815 FNDC4Q9H6D8 234 aaPredicted RBP14.71□□□□□ -0.05
TSPAN4-212ENST00000494815 CENPVL3A0A0U1RRI6 287 aa14.7□□□□□ -0.06
TSPAN4-212ENST00000494815 F2Z2F3 143 aa14.7□□□□□ -0.06
TSPAN4-212ENST00000494815 CNIH1O95406 144 aa14.7□□□□□ -0.06
TSPAN4-212ENST00000494815 FAM106CPP0CH98 169 aa14.7□□□□□ -0.06
TSPAN4-212ENST00000494815 CRYBG3Q68DQ2 2970 aa14.7□□□□□ -0.06
TSPAN4-212ENST00000494815 GNB1LQ9BYB4 327 aa14.7□□□□□ -0.06
TSPAN4-212ENST00000494815 F11RQ9Y624 299 aaKnown RBP14.7□□□□□ -0.06
TSPAN4-212ENST00000494815 SPATA31B1PQ5VZV4 182 aa14.7□□□□□ -0.06
TSPAN4-212ENST00000494815 SEPSECSQ9HD40 501 aaKnown RBP14.7□□□□□ -0.06
TSPAN4-212ENST00000494815 ZFP30Q9Y2G7 519 aa14.7□□□□□ -0.06
TSPAN4-212ENST00000494815 V9GYV3 84 aa14.7□□□□□ -0.06
TSPAN4-212ENST00000494815 OR5I1Q13606 314 aa14.69□□□□□ -0.06
TSPAN4-212ENST00000494815 OR2T6Q8NHC8 308 aa14.69□□□□□ -0.06
TSPAN4-212ENST00000494815 CHD6Q8TD26 2715 aa14.69□□□□□ -0.06
TSPAN4-212ENST00000494815 CRYGCP07315 174 aa14.68□□□□□ -0.06
TSPAN4-212ENST00000494815 MSMBP08118 114 aa14.68□□□□□ -0.06
TSPAN4-212ENST00000494815 LINC00869P0C866 280 aa14.68□□□□□ -0.06
TSPAN4-212ENST00000494815 FBLN7Q53RD9 439 aa14.68□□□□□ -0.06
TSPAN4-212ENST00000494815 PIP4P2Q8N4L2 257 aa14.68□□□□□ -0.06
TSPAN4-212ENST00000494815 SIGLECL1Q8N7X8 197 aa14.68□□□□□ -0.06
TSPAN4-212ENST00000494815 OR4B1Q8NGF8 309 aa14.68□□□□□ -0.06
TSPAN4-212ENST00000494815 FBXL7Q9UJT9 491 aa14.68□□□□□ -0.06
TSPAN4-212ENST00000494815 USP9YO00507 2555 aaPredicted RBP14.68□□□□□ -0.06
TSPAN4-212ENST00000494815 MFAP2P55001 183 aa14.68□□□□□ -0.06
TSPAN4-212ENST00000494815 FXYD3Q14802 87 aa14.68□□□□□ -0.06
TSPAN4-212ENST00000494815 ARL2-SNX15V9GYD0 113 aa14.68□□□□□ -0.06
TSPAN4-212ENST00000494815 MT-ND6P03923 174 aa14.67□□□□□ -0.06
TSPAN4-212ENST00000494815 GPX1P07203 203 aa14.67□□□□□ -0.06
TSPAN4-212ENST00000494815 FRMD6-AS1P0C7T7 363 aa14.67□□□□□ -0.06
TSPAN4-212ENST00000494815 RPL19P84098 196 aaKnown RBP14.67□□□□□ -0.06
TSPAN4-212ENST00000494815 ZNF562Q6V9R5 426 aa14.67□□□□□ -0.06
TSPAN4-212ENST00000494815 OR8I2Q8N0Y5 310 aa14.67□□□□□ -0.06
TSPAN4-212ENST00000494815 THAP8Q8NA92 274 aa14.67□□□□□ -0.06
TSPAN4-212ENST00000494815 GNB4Q9HAV0 340 aa14.67□□□□□ -0.06
TSPAN4-212ENST00000494815 ZNF586Q9NXT0 402 aa14.67□□□□□ -0.06
TSPAN4-212ENST00000494815 C1RLQ9NZP8 487 aa14.67□□□□□ -0.06
TSPAN4-212ENST00000494815 NCBP2LA6PVI3 153 aaKnown RBP14.67□□□□□ -0.06
TSPAN4-212ENST00000494815 B4DSR2 109 aa14.67□□□□□ -0.06
TSPAN4-212ENST00000494815 OR10J4P0C629 311 aa14.67□□□□□ -0.06
TSPAN4-212ENST00000494815 APELAP0DMC3 54 aa14.67□□□□□ -0.06
TSPAN4-212ENST00000494815 LEMD1Q68G75 181 aa14.67□□□□□ -0.06
TSPAN4-212ENST00000494815 WDR73Q6P4I2 378 aa14.67□□□□□ -0.06
TSPAN4-212ENST00000494815 C19orf24Q9BVV8 132 aa14.67□□□□□ -0.06
TSPAN4-212ENST00000494815 RNF114Q9Y508 228 aa14.67□□□□□ -0.06
TSPAN4-212ENST00000494815 PTPN13Q12923 2485 aa14.66□□□□□ -0.06
TSPAN4-212ENST00000494815 IGHV1-69DA0A0B4J2H0 117 aa14.66□□□□□ -0.06
TSPAN4-212ENST00000494815 IGHV1-69P01742 117 aa14.66□□□□□ -0.06
TSPAN4-212ENST00000494815 OR10J3Q5JRS4 329 aa14.66□□□□□ -0.06
TSPAN4-212ENST00000494815 Q8N976 141 aa14.66□□□□□ -0.06
TSPAN4-212ENST00000494815 NPIPB3Q92617 1050 aa14.66□□□□□ -0.06
TSPAN4-212ENST00000494815 RNF2Q99496 336 aa14.66□□□□□ -0.06
TSPAN4-212ENST00000494815 K7EP13 123 aa14.66□□□□□ -0.06
TSPAN4-212ENST00000494815 GNG4P50150 75 aa14.66□□□□□ -0.06
TSPAN4-212ENST00000494815 COX19Q49B96 90 aa14.66□□□□□ -0.06
TSPAN4-212ENST00000494815 FBN2P35556 2912 aa14.65□□□□□ -0.06
TSPAN4-212ENST00000494815 CX3CL1P78423 397 aa14.65□□□□□ -0.06
TSPAN4-212ENST00000494815 BATFQ16520 125 aa14.65□□□□□ -0.06
TSPAN4-212ENST00000494815 CENPWQ5EE01 88 aa14.65□□□□□ -0.06
TSPAN4-212ENST00000494815 TMEM116Q8NCL8 245 aa14.65□□□□□ -0.06
TSPAN4-212ENST00000494815 FAM103A1Q9BTL3 118 aaKnown RBP14.65□□□□□ -0.06
TSPAN4-212ENST00000494815 NAT8BQ9UHF3 227 aa14.65□□□□□ -0.06
TSPAN4-212ENST00000494815 DIRC3C9JPN6 131 aa14.64□□□□□ -0.07
TSPAN4-212ENST00000494815 GATA3P23771 443 aa14.64□□□□□ -0.07
TSPAN4-212ENST00000494815 KRTDAPP60985 99 aa14.64□□□□□ -0.07
TSPAN4-212ENST00000494815 ARPC1AQ92747 370 aa14.64□□□□□ -0.07
TSPAN4-212ENST00000494815 KCNS1Q96KK3 526 aa14.64□□□□□ -0.07
TSPAN4-212ENST00000494815 BEX4Q9NWD9 120 aaPredicted RBP14.64□□□□□ -0.07
TSPAN4-212ENST00000494815 TCRBV4S1A1TA0A5B7 111 aa14.64□□□□□ -0.07
TSPAN4-212ENST00000494815 HELTA6NFD8 242 aa14.64□□□□□ -0.07
TSPAN4-212ENST00000494815 COL8A1P27658 744 aa14.64□□□□□ -0.07
TSPAN4-212ENST00000494815 CTRLP40313 264 aa14.64□□□□□ -0.07
TSPAN4-212ENST00000494815 COL5A1-AS1Q5SY13 56 aa14.64□□□□□ -0.07
TSPAN4-212ENST00000494815 FAM120AOSQ5T036 256 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms