RNA–Protein interactions for RNA: ENST00000488250.5

RAPGEF3-211, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 1,947 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-211ENST00000488250 C21orf62Q9NYP8 219 aa12.57□□□□□ -0.4
RAPGEF3-211ENST00000488250 RNF24Q9Y225 148 aa12.57□□□□□ -0.4
RAPGEF3-211ENST00000488250 WNK2Q9Y3S1 2297 aa12.57□□□□□ -0.4
RAPGEF3-211ENST00000488250 PGPA6NDG6 321 aa12.56□□□□□ -0.4
RAPGEF3-211ENST00000488250 GNG7O60262 68 aa12.56□□□□□ -0.4
RAPGEF3-211ENST00000488250 HIST1H1BP16401 226 aaKnown RBP12.56□□□□□ -0.4
RAPGEF3-211ENST00000488250 ATP5J2P56134 94 aa12.56□□□□□ -0.4
RAPGEF3-211ENST00000488250 LEMD1Q68G75 181 aa12.56□□□□□ -0.4
RAPGEF3-211ENST00000488250 FAM231DQ6ZW35 169 aa12.56□□□□□ -0.4
RAPGEF3-211ENST00000488250 S100A7AQ86SG5 101 aa12.56□□□□□ -0.4
RAPGEF3-211ENST00000488250 LINC00479Q96M42 142 aa12.56□□□□□ -0.4
RAPGEF3-211ENST00000488250 GAR1Q9NY12 217 aaKnown RBP12.56□□□□□ -0.4
RAPGEF3-211ENST00000488250 COL12A1Q99715 3063 aa12.56□□□□□ -0.4
RAPGEF3-211ENST00000488250 SLC25A5P05141 298 aaKnown RBP12.56□□□□□ -0.4
RAPGEF3-211ENST00000488250 FAM110DQ8TAY7 271 aaPredicted RBP12.56□□□□□ -0.4
RAPGEF3-211ENST00000488250 TXN2Q99757 166 aa12.56□□□□□ -0.4
RAPGEF3-211ENST00000488250 ATG101Q9BSB4 218 aa12.56□□□□□ -0.4
RAPGEF3-211ENST00000488250 NDUFB8O95169 186 aa12.55□□□□□ -0.4
RAPGEF3-211ENST00000488250 BAGE2Q86Y30 109 aa12.55□□□□□ -0.4
RAPGEF3-211ENST00000488250 VN1R17PQ8TDU5 208 aa12.55□□□□□ -0.4
RAPGEF3-211ENST00000488250 HSPB9Q9BQS6 159 aa12.55□□□□□ -0.4
RAPGEF3-211ENST00000488250 RNASE7Q9H1E1 156 aaKnown RBP12.55□□□□□ -0.4
RAPGEF3-211ENST00000488250 Q9H3A6 140 aa12.55□□□□□ -0.4
RAPGEF3-211ENST00000488250 OTORQ9NRC9 128 aa12.55□□□□□ -0.4
RAPGEF3-211ENST00000488250 TRAPPC1Q9Y5R8 145 aa12.55□□□□□ -0.4
RAPGEF3-211ENST00000488250 AKAP6Q13023 2319 aa12.55□□□□□ -0.4
RAPGEF3-211ENST00000488250 ABCA1O95477 2261 aa12.55□□□□□ -0.4
RAPGEF3-211ENST00000488250 IGHV1-69DA0A0B4J2H0 117 aa12.54□□□□□ -0.4
RAPGEF3-211ENST00000488250 IGHV1-69P01742 117 aa12.54□□□□□ -0.4
RAPGEF3-211ENST00000488250 PAX1P15863 534 aa12.54□□□□□ -0.4
RAPGEF3-211ENST00000488250 IBA57Q5T440 356 aaKnown RBP12.54□□□□□ -0.4
RAPGEF3-211ENST00000488250 GFI1BQ5VTD9 330 aa12.54□□□□□ -0.4
RAPGEF3-211ENST00000488250 BPIFA4PQ86YQ2 179 aa12.54□□□□□ -0.4
RAPGEF3-211ENST00000488250 TMEM183AQ8IXX5 376 aa12.54□□□□□ -0.4
RAPGEF3-211ENST00000488250 ZNF586Q9NXT0 402 aa12.54□□□□□ -0.4
RAPGEF3-211ENST00000488250 MED13LQ71F56 2210 aa12.54□□□□□ -0.4
RAPGEF3-211ENST00000488250 SCGB2A1O75556 95 aa12.54□□□□□ -0.4
RAPGEF3-211ENST00000488250 IL4P05112 153 aa12.54□□□□□ -0.4
RAPGEF3-211ENST00000488250 MGST1P10620 155 aaKnown RBP12.54□□□□□ -0.4
RAPGEF3-211ENST00000488250 S100A2P29034 98 aa12.54□□□□□ -0.4
RAPGEF3-211ENST00000488250 GNG5P63218 68 aa12.54□□□□□ -0.4
RAPGEF3-211ENST00000488250 GPR61Q9BZJ8 451 aa12.54□□□□□ -0.4
RAPGEF3-211ENST00000488250 LRRK2Q5S007 2527 aa12.53□□□□□ -0.4
RAPGEF3-211ENST00000488250 TCRAP04437 139 aa12.53□□□□□ -0.4
RAPGEF3-211ENST00000488250 SNRPCP09234 159 aaKnown RBP12.53□□□□□ -0.4
RAPGEF3-211ENST00000488250 UBE2G1P62253 170 aa12.53□□□□□ -0.4
RAPGEF3-211ENST00000488250 RPL19P84098 196 aaKnown RBP12.53□□□□□ -0.4
RAPGEF3-211ENST00000488250 Q56UQ5 140 aa12.53□□□□□ -0.4
RAPGEF3-211ENST00000488250 FMC1Q96HJ9 113 aa12.53□□□□□ -0.4
RAPGEF3-211ENST00000488250 MEGF9Q9H1U4 602 aa12.53□□□□□ -0.4
RAPGEF3-211ENST00000488250 C7orf69Q9H7B7 122 aa12.53□□□□□ -0.4
RAPGEF3-211ENST00000488250 FBXL7Q9UJT9 491 aa12.53□□□□□ -0.4
RAPGEF3-211ENST00000488250 SPTAN1Q13813 2472 aaKnown RBP12.53□□□□□ -0.4
RAPGEF3-211ENST00000488250 ABCA2Q9BZC7 2435 aa12.53□□□□□ -0.4
RAPGEF3-211ENST00000488250 TRBV19A0A075B6N1 114 aa12.52□□□□□ -0.4
RAPGEF3-211ENST00000488250 IGHV4-30-2A0A087WSY4 118 aa12.52□□□□□ -0.4
RAPGEF3-211ENST00000488250 TRBV9A0A0B4J1U6 114 aa12.52□□□□□ -0.4
RAPGEF3-211ENST00000488250 TRAV34A0A0B4J273 112 aa12.52□□□□□ -0.4
RAPGEF3-211ENST00000488250 SMIM27A0A1W2PRY6 76 aa12.52□□□□□ -0.4
RAPGEF3-211ENST00000488250 XKRY2A2RUG3 117 aa12.52□□□□□ -0.4
RAPGEF3-211ENST00000488250 MRPS12O15235 138 aaKnown RBP12.52□□□□□ -0.4
RAPGEF3-211ENST00000488250 OR2J3O76001 311 aa12.52□□□□□ -0.4
RAPGEF3-211ENST00000488250 IGLC2P0DOY2 106 aa12.52□□□□□ -0.4
RAPGEF3-211ENST00000488250 DSCR9P59020 149 aa12.52□□□□□ -0.4
RAPGEF3-211ENST00000488250 LYPD1Q8N2G4 141 aa12.52□□□□□ -0.4
RAPGEF3-211ENST00000488250 C5orf56Q8N8D9 126 aa12.52□□□□□ -0.4
RAPGEF3-211ENST00000488250 GPR82Q96P67 336 aa12.52□□□□□ -0.4
RAPGEF3-211ENST00000488250 MLST8Q9BVC4 326 aa12.52□□□□□ -0.4
RAPGEF3-211ENST00000488250 USF2Q15853 346 aaPredicted RBP12.52□□□□□ -0.41
RAPGEF3-211ENST00000488250 COX19Q49B96 90 aa12.52□□□□□ -0.41
RAPGEF3-211ENST00000488250 OR4F17Q8NGA8 305 aa12.52□□□□□ -0.41
RAPGEF3-211ENST00000488250 MBD6Q96DN6 1003 aa12.52□□□□□ -0.41
RAPGEF3-211ENST00000488250 CHRDL1Q9BU40 450 aa12.52□□□□□ -0.41
RAPGEF3-211ENST00000488250 TRBV6-1A0A0K0K1D8 114 aa12.51□□□□□ -0.41
RAPGEF3-211ENST00000488250 ATP6V0E1O15342 81 aa12.51□□□□□ -0.41
RAPGEF3-211ENST00000488250 CTSGP08311 255 aa12.51□□□□□ -0.41
RAPGEF3-211ENST00000488250 UNQ5815/PRO19632Q6UWF5 114 aa12.51□□□□□ -0.41
RAPGEF3-211ENST00000488250 OR8I2Q8N0Y5 310 aa12.51□□□□□ -0.41
RAPGEF3-211ENST00000488250 TMUB1Q9BVT8 246 aa12.51□□□□□ -0.41
RAPGEF3-211ENST00000488250 S4R3C0 116 aa12.51□□□□□ -0.41
RAPGEF3-211ENST00000488250 LTAP01374 205 aa12.5□□□□□ -0.41
RAPGEF3-211ENST00000488250 NHLRC2Q8NBF2 726 aa12.5□□□□□ -0.41
RAPGEF3-211ENST00000488250 PIFOQ8TCI5 191 aa12.5□□□□□ -0.41
RAPGEF3-211ENST00000488250 GNB1LQ9BYB4 327 aa12.5□□□□□ -0.41
RAPGEF3-211ENST00000488250 MOB4Q9Y3A3 225 aa12.5□□□□□ -0.41
RAPGEF3-211ENST00000488250 ZNF705GA8MUZ8 300 aaPredicted RBP12.5□□□□□ -0.41
RAPGEF3-211ENST00000488250 MSMBP08118 114 aa12.5□□□□□ -0.41
RAPGEF3-211ENST00000488250 ZNF502Q8TBZ5 544 aa12.5□□□□□ -0.41
RAPGEF3-211ENST00000488250 HIST1H2BLQ99880 126 aa12.5□□□□□ -0.41
RAPGEF3-211ENST00000488250 H3BTX0 84 aa12.49□□□□□ -0.41
RAPGEF3-211ENST00000488250 CRIP2P52943 208 aaPredicted RBP12.49□□□□□ -0.41
RAPGEF3-211ENST00000488250 S100A12P80511 92 aa12.49□□□□□ -0.41
RAPGEF3-211ENST00000488250 PDE6HQ13956 83 aa12.49□□□□□ -0.41
RAPGEF3-211ENST00000488250 SIGLEC15Q6ZMC9 328 aa12.49□□□□□ -0.41
RAPGEF3-211ENST00000488250 NUDT10Q8NFP7 164 aa12.49□□□□□ -0.41
RAPGEF3-211ENST00000488250 NUDT11Q96G61 164 aa12.49□□□□□ -0.41
RAPGEF3-211ENST00000488250 GRAMD2BQ96HH9 432 aa12.49□□□□□ -0.41
RAPGEF3-211ENST00000488250 TRAV40A0A0B4J280 105 aa12.49□□□□□ -0.41
RAPGEF3-211ENST00000488250 OR2T8A6NH00 312 aa12.49□□□□□ -0.41
RAPGEF3-211ENST00000488250 GATCO43716 136 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms