RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 HIST1H2BCP62807 126 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 RPS25P62851 125 aaKnown RBP1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 AKR1C1Q04828 323 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 PRDX1Q06830 199 aaKnown RBP1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 TMEM267Q0VDI3 215 aaPredicted RBP1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 HIST2H2BEQ16778 126 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 PLPPR5Q32ZL2 321 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 MRPL54Q6P161 138 aaKnown RBP1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 BRD3OSQ6XYD6 125 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 SLC36A1Q7Z2H8 476 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 SLC35E3Q7Z769 313 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 S100A7AQ86SG5 101 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 LRP11Q86VZ4 500 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 C20orf196Q8IYI0 205 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 OR52R1Q8NGF1 315 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 OR51T1Q8NGJ9 327 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 OR13C6PQ8NH95 151 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 STAG3L4Q8TBR4 150 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 THEM6Q8WUY1 208 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 SMIM4Q8WVI0 70 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 HIST1H2BHQ93079 126 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 BORCS7Q96B45 105 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 PPCDCQ96CD2 204 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 SLC35G5Q96KT7 338 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 MCEEQ96PE7 176 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 TSPAN32Q96QS1 320 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 HIST1H2BNQ99877 126 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 HIST1H2BMQ99879 126 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 PMCHL2Q9BQD1 86 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 TSSK6Q9BXA6 273 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 KRTAP4-1Q9BYQ7 146 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 TMEM126AQ9H061 195 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 MFSD1Q9H3U5 465 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 SPANXB1Q9NS25 103 aaPredicted RBP1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 DMAC2Q9NW81 257 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 MRPL16Q9NX20 251 aaKnown RBP1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 CRCT1Q9UGL9 99 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 HHLA2Q9UM44 414 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 CYSLTR1Q9Y271 337 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 LAMTOR2Q9Y2Q5 125 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 NOP16Q9Y3C1 178 aaKnown RBP1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 SNX10Q9Y5X0 201 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 TNS3Q68CZ2 1445 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 THADAQ6YHU6 1953 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 SHROOM3Q8TF72 1996 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 DUOX1Q9NRD9 1551 aa1.72□□□□□ -2.13
SNRNP27-204ENST00000487029 PDCD11Q14690 1871 aaKnown RBP1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 FOCADQ5VW36 1801 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 TRBV24-1A0A075B6N3 115 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 IGHV2-26A0A0B4J1V2 119 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 TRAV1-2A0A0B4J238 106 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 TRAV38-1A0A0B4J264 116 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 IGHV1-69-2A0A0G2JMI3 117 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 A0A1W2PRS3 328 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 IGSF23A1L1A6 192 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 MAP1LC3B2A6NCE7 125 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 TLCD2A6NGC4 264 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 A8MT66 165 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 FTCDNL1E5RQL4 147 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 FXYD1O00168 92 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 PIRO00625 290 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 CCL25O15444 150 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 GNG7O60262 68 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 CNIH1O95406 144 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 CPSF4O95639 269 aaKnown RBP1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 CYB5AP00167 134 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 IGKV1D-33P01593 117 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 IGKV1-33P01594 117 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 HBZP02008 142 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 TRGC2P03986 189 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 OPN1SWP03999 348 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 SMIM10L2AP0DMW4 78 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 SMIM10L2BP0DMW5 78 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 ADCYAP1P18509 176 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 S100A7P31151 101 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 SRP14P37108 136 aaKnown RBP1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 FOXA1P55317 472 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 TMEM33P57088 247 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 RHOGP84095 191 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 ZNF141Q15928 474 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 TMEM176BQ3YBM2 270 aaPredicted RBP1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 TMEM128Q5BJH2 165 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 LAIR2Q6ISS4 152 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 SFXN4Q6P4A7 337 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 TNFAIP8L2Q6P589 184 aaPredicted RBP1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 CD200R1LQ6Q8B3 271 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 ALKAL1Q6UXT8 129 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 DPPA3Q6W0C5 159 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 DGAT2L6Q6ZPD8 337 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 Q6ZQT7 251 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 OLIG3Q7RTU3 272 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 TMEM251Q8N6I4 163 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 SIGLECL1Q8N7X8 197 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 GATD1Q8NB37 220 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 OR10X1Q8NGY0 326 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 OR2T27Q8NH04 317 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 CMTM2Q8TAZ6 248 aa1.71□□□□□ -2.14
SNRNP27-204ENST00000487029 DOHHQ9BU89 302 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms