RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 COX7A2P2O60397 106 aa4.24□□□□□ -1.73
COL17A1-206ENST00000483876 OR2C1O95371 312 aa4.24□□□□□ -1.73
COL17A1-206ENST00000483876 TOMM40O96008 361 aa4.24□□□□□ -1.73
COL17A1-206ENST00000483876 TGFAP01135 160 aa4.24□□□□□ -1.73
COL17A1-206ENST00000483876 IGKV1-17P01599 117 aa4.24□□□□□ -1.73
COL17A1-206ENST00000483876 RBMY1DP0C7P1 496 aaKnown RBP4.24□□□□□ -1.73
COL17A1-206ENST00000483876 IGHV4-31P0DP07 118 aa4.24□□□□□ -1.73
COL17A1-206ENST00000483876 SRP14P37108 136 aaKnown RBP4.24□□□□□ -1.73
COL17A1-206ENST00000483876 ZNF90Q03938 601 aa4.24□□□□□ -1.73
COL17A1-206ENST00000483876 RNF212Q495C1 297 aa4.24□□□□□ -1.73
COL17A1-206ENST00000483876 KLF17Q5JT82 389 aaPredicted RBP4.24□□□□□ -1.73
COL17A1-206ENST00000483876 ZNF343Q6P1L6 599 aa4.24□□□□□ -1.73
COL17A1-206ENST00000483876 MIR17HGQ75NE6 70 aa4.24□□□□□ -1.73
COL17A1-206ENST00000483876 NECAP1Q8NC96 275 aa4.24□□□□□ -1.73
COL17A1-206ENST00000483876 OR4F5Q8NH21 305 aa4.24□□□□□ -1.73
COL17A1-206ENST00000483876 OR5R1Q8NH85 324 aa4.24□□□□□ -1.73
COL17A1-206ENST00000483876 C11orf52Q96A22 123 aa4.24□□□□□ -1.73
COL17A1-206ENST00000483876 WWC2-AS2Q96NR7 200 aa4.24□□□□□ -1.73
COL17A1-206ENST00000483876 OR4F4Q96R69 305 aa4.24□□□□□ -1.73
COL17A1-206ENST00000483876 OR51M1Q9H341 326 aa4.24□□□□□ -1.73
COL17A1-206ENST00000483876 RPS10P5Q9NQ39 176 aa4.24□□□□□ -1.73
COL17A1-206ENST00000483876 TMEM14CQ9P0S9 112 aa4.24□□□□□ -1.73
COL17A1-206ENST00000483876 PUS1Q9Y606 427 aaKnown RBP eCLIP4.24□□□□□ -1.73
COL17A1-206ENST00000483876 PLXNB1O43157 2135 aa4.24□□□□□ -1.73
COL17A1-206ENST00000483876 TRBV7-1A0A0A6YYK4 115 aa4.23□□□□□ -1.73
COL17A1-206ENST00000483876 TRAV40A0A0B4J280 105 aa4.23□□□□□ -1.73
COL17A1-206ENST00000483876 WI2-2373I1.2A0A1W2PRP0 233 aa4.23□□□□□ -1.73
COL17A1-206ENST00000483876 COLCA2A8K830 154 aa4.23□□□□□ -1.73
COL17A1-206ENST00000483876 TSPAN4O14817 238 aa4.23□□□□□ -1.73
COL17A1-206ENST00000483876 HMGB3O15347 200 aaKnown RBP4.23□□□□□ -1.73
COL17A1-206ENST00000483876 NDUFB8O95169 186 aa4.23□□□□□ -1.73
COL17A1-206ENST00000483876 AVPP01185 164 aa4.23□□□□□ -1.73
COL17A1-206ENST00000483876 FSHBP01225 129 aa4.23□□□□□ -1.73
COL17A1-206ENST00000483876 IGHG2P01859 326 aa4.23□□□□□ -1.73
COL17A1-206ENST00000483876 MT-ND4LP03901 98 aa4.23□□□□□ -1.73
COL17A1-206ENST00000483876 AMY1AP04745 511 aa4.23□□□□□ -1.73
COL17A1-206ENST00000483876 CTSGP08311 255 aa4.23□□□□□ -1.73
COL17A1-206ENST00000483876 IGHV4-38-2P0DP08 117 aa4.23□□□□□ -1.73
COL17A1-206ENST00000483876 PSG1P11464 419 aa4.23□□□□□ -1.73
COL17A1-206ENST00000483876 FOLR2P14207 255 aa4.23□□□□□ -1.73
COL17A1-206ENST00000483876 NPPCP23582 126 aa4.23□□□□□ -1.73
COL17A1-206ENST00000483876 GATA2P23769 480 aaPredicted RBP4.23□□□□□ -1.73
COL17A1-206ENST00000483876 C19orf54Q5BKX5 351 aa4.23□□□□□ -1.73
COL17A1-206ENST00000483876 FAM209BQ5JX69 171 aa4.23□□□□□ -1.73
COL17A1-206ENST00000483876 SPATA31B1PQ5VZV4 182 aa4.23□□□□□ -1.73
COL17A1-206ENST00000483876 CST9LP1Q5W188 147 aa4.23□□□□□ -1.73
COL17A1-206ENST00000483876 UNQ5815/PRO19632Q6UWF5 114 aa4.23□□□□□ -1.73
COL17A1-206ENST00000483876 LINC00305Q7Z4B0 112 aa4.23□□□□□ -1.73
COL17A1-206ENST00000483876 ZNF491Q8N8L2 437 aa4.23□□□□□ -1.73
COL17A1-206ENST00000483876 OR5T1Q8NG75 326 aa4.23□□□□□ -1.73
COL17A1-206ENST00000483876 Q8WTZ3 238 aa4.23□□□□□ -1.73
COL17A1-206ENST00000483876 ZNF503Q96F45 646 aa4.23□□□□□ -1.73
COL17A1-206ENST00000483876 SMIM7Q9BQ49 75 aa4.23□□□□□ -1.73
COL17A1-206ENST00000483876 HSPB9Q9BQS6 159 aa4.23□□□□□ -1.73
COL17A1-206ENST00000483876 FAM103A1Q9BTL3 118 aaKnown RBP4.23□□□□□ -1.73
COL17A1-206ENST00000483876 PAXXQ9BUH6 204 aa4.23□□□□□ -1.73
COL17A1-206ENST00000483876 SLC25A2Q9BXI2 301 aa4.23□□□□□ -1.73
COL17A1-206ENST00000483876 PARLQ9H300 379 aa4.23□□□□□ -1.73
COL17A1-206ENST00000483876 ZNF355PQ9NSJ1 428 aa4.23□□□□□ -1.73
COL17A1-206ENST00000483876 C21orf62Q9NYP8 219 aa4.23□□□□□ -1.73
COL17A1-206ENST00000483876 FBXL7Q9UJT9 491 aa4.23□□□□□ -1.73
COL17A1-206ENST00000483876 HIGD1AQ9Y241 93 aa4.23□□□□□ -1.73
COL17A1-206ENST00000483876 TRAV41A0A0B4J266 112 aa4.22□□□□□ -1.73
COL17A1-206ENST00000483876 HELTA6NFD8 242 aa4.22□□□□□ -1.73
COL17A1-206ENST00000483876 FAM223BA6NKX1 122 aa4.22□□□□□ -1.73
COL17A1-206ENST00000483876 C9JCJ5 164 aa4.22□□□□□ -1.73
COL17A1-206ENST00000483876 F8W735 103 aaPredicted RBP4.22□□□□□ -1.73
COL17A1-206ENST00000483876 CLDN34H7C241 214 aa4.22□□□□□ -1.73
COL17A1-206ENST00000483876 PPP1R2P9O14990 202 aa4.22□□□□□ -1.73
COL17A1-206ENST00000483876 ATP6V0E1O15342 81 aa4.22□□□□□ -1.73
COL17A1-206ENST00000483876 GNG7O60262 68 aa4.22□□□□□ -1.73
COL17A1-206ENST00000483876 OR7C2O60412 319 aa4.22□□□□□ -1.73
COL17A1-206ENST00000483876 NDUFB4O95168 129 aa4.22□□□□□ -1.73
COL17A1-206ENST00000483876 IGHV3-48P01763 117 aa4.22□□□□□ -1.73
COL17A1-206ENST00000483876 S100A9P06702 114 aaKnown RBP4.22□□□□□ -1.73
COL17A1-206ENST00000483876 NBEAP1P0C6P0 100 aa4.22□□□□□ -1.73
COL17A1-206ENST00000483876 APELAP0DMC3 54 aa4.22□□□□□ -1.73
COL17A1-206ENST00000483876 HIST1H1EP10412 219 aaKnown RBP4.22□□□□□ -1.73
COL17A1-206ENST00000483876 ORM2P19652 201 aa4.22□□□□□ -1.73
COL17A1-206ENST00000483876 MYCNOSP40205 109 aa4.22□□□□□ -1.73
COL17A1-206ENST00000483876 IER3P46695 156 aa4.22□□□□□ -1.73
COL17A1-206ENST00000483876 RAB9AP51151 201 aa4.22□□□□□ -1.73
COL17A1-206ENST00000483876 TAS2R60P59551 318 aa4.22□□□□□ -1.73
COL17A1-206ENST00000483876 NDPQ00604 133 aa4.22□□□□□ -1.73
COL17A1-206ENST00000483876 FOXL1Q12952 345 aa4.22□□□□□ -1.73
COL17A1-206ENST00000483876 TIGITQ495A1 244 aa4.22□□□□□ -1.73
COL17A1-206ENST00000483876 RUSC1-AS1Q66K80 236 aa4.22□□□□□ -1.73
COL17A1-206ENST00000483876 TMEM88Q6PEY1 159 aa4.22□□□□□ -1.73
COL17A1-206ENST00000483876 BRD3OSQ6XYD6 125 aa4.22□□□□□ -1.73
COL17A1-206ENST00000483876 FAM223AQ8IWN6 122 aa4.22□□□□□ -1.73
COL17A1-206ENST00000483876 IQCF2Q8IXL9 164 aa4.22□□□□□ -1.73
COL17A1-206ENST00000483876 LYPD1Q8N2G4 141 aa4.22□□□□□ -1.73
COL17A1-206ENST00000483876 ARL6IP6Q8N6S5 226 aa4.22□□□□□ -1.73
COL17A1-206ENST00000483876 OR5AU1Q8NGC0 362 aa4.22□□□□□ -1.73
COL17A1-206ENST00000483876 OR1B1Q8NGR6 318 aa4.22□□□□□ -1.73
COL17A1-206ENST00000483876 ZNF502Q8TBZ5 544 aa4.22□□□□□ -1.73
COL17A1-206ENST00000483876 HIST1H2BAQ96A08 127 aa4.22□□□□□ -1.73
COL17A1-206ENST00000483876 FXYD5Q96DB9 178 aa4.22□□□□□ -1.73
COL17A1-206ENST00000483876 ANAPC16Q96DE5 110 aa4.22□□□□□ -1.73
COL17A1-206ENST00000483876 USMG5Q96IX5 58 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms