RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 RNASE7Q9H1E1 156 aaKnown RBP11.46□□□□□ -0.57
CHD3-211ENST00000481999 TP53TG3Q9ULZ0 132 aa11.46□□□□□ -0.57
CHD3-211ENST00000481999 IGHV2-70DA0A0C4DH43 119 aa11.46□□□□□ -0.58
CHD3-211ENST00000481999 NCBP2LA6PVI3 153 aaKnown RBP11.46□□□□□ -0.58
CHD3-211ENST00000481999 CNIH1O95406 144 aa11.46□□□□□ -0.58
CHD3-211ENST00000481999 BPIFB3P59826 476 aa11.46□□□□□ -0.58
CHD3-211ENST00000481999 Q0VG73 95 aa11.46□□□□□ -0.58
CHD3-211ENST00000481999 ZNF600Q6ZNG1 722 aa11.46□□□□□ -0.58
CHD3-211ENST00000481999 APCP25054 2843 aa11.45□□□□□ -0.58
CHD3-211ENST00000481999 TCRBV4S1A1TA0A5B7 111 aa11.45□□□□□ -0.58
CHD3-211ENST00000481999 SH2D7A6NKC9 451 aaPredicted RBP11.45□□□□□ -0.58
CHD3-211ENST00000481999 IGLV2-8P01709 118 aa11.45□□□□□ -0.58
CHD3-211ENST00000481999 COL8A1P27658 744 aa11.45□□□□□ -0.58
CHD3-211ENST00000481999 TAS2R60P59551 318 aa11.45□□□□□ -0.58
CHD3-211ENST00000481999 NDPQ00604 133 aa11.45□□□□□ -0.58
CHD3-211ENST00000481999 IBA57Q5T440 356 aaKnown RBP11.45□□□□□ -0.58
CHD3-211ENST00000481999 C10orf113Q5VZT2 155 aa11.45□□□□□ -0.58
CHD3-211ENST00000481999 BAGE3Q86Y29 109 aa11.45□□□□□ -0.58
CHD3-211ENST00000481999 BAGE2Q86Y30 109 aa11.45□□□□□ -0.58
CHD3-211ENST00000481999 CDC42EP3Q9UKI2 254 aa11.45□□□□□ -0.58
CHD3-211ENST00000481999 NAV2Q8IVL1 2488 aa11.45□□□□□ -0.58
CHD3-211ENST00000481999 SERF1AO75920 110 aa11.45□□□□□ -0.58
CHD3-211ENST00000481999 PIP4P2Q8N4L2 257 aa11.45□□□□□ -0.58
CHD3-211ENST00000481999 THAP8Q8NA92 274 aa11.45□□□□□ -0.58
CHD3-211ENST00000481999 AJUBAQ96IF1 538 aa11.45□□□□□ -0.58
CHD3-211ENST00000481999 C2orf88Q9BSF0 95 aa11.45□□□□□ -0.58
CHD3-211ENST00000481999 ZNF355PQ9NSJ1 428 aa11.45□□□□□ -0.58
CHD3-211ENST00000481999 SOX21Q9Y651 276 aaPredicted RBP11.45□□□□□ -0.58
CHD3-211ENST00000481999 MXRA5Q9NR99 2828 aa11.45□□□□□ -0.58
CHD3-211ENST00000481999 NBR2O15453 112 aa11.44□□□□□ -0.58
CHD3-211ENST00000481999 MGST1P10620 155 aaKnown RBP11.44□□□□□ -0.58
CHD3-211ENST00000481999 LINC00310P59036 64 aa11.44□□□□□ -0.58
CHD3-211ENST00000481999 FXYD3Q14802 87 aa11.44□□□□□ -0.58
CHD3-211ENST00000481999 C1orf194Q5T5A4 169 aa11.44□□□□□ -0.58
CHD3-211ENST00000481999 PAXXQ9BUH6 204 aa11.44□□□□□ -0.58
CHD3-211ENST00000481999 NAT8BQ9UHF3 227 aa11.44□□□□□ -0.58
CHD3-211ENST00000481999 IGHV4-30-2A0A087WSY4 118 aa11.44□□□□□ -0.58
CHD3-211ENST00000481999 FRMD6-AS1P0C7T7 363 aa11.44□□□□□ -0.58
CHD3-211ENST00000481999 SAA4P35542 130 aa11.44□□□□□ -0.58
CHD3-211ENST00000481999 ATP5J2P56134 94 aa11.44□□□□□ -0.58
CHD3-211ENST00000481999 DOPEY2Q9Y3R5 2298 aa11.43□□□□□ -0.58
CHD3-211ENST00000481999 A0A1B0GV90 55 aa11.43□□□□□ -0.58
CHD3-211ENST00000481999 SMIM27A0A1W2PRY6 76 aa11.43□□□□□ -0.58
CHD3-211ENST00000481999 POLR3KQ9Y2Y1 108 aaPredicted RBP11.43□□□□□ -0.58
CHD3-211ENST00000481999 TLN2Q9Y4G6 2542 aa11.43□□□□□ -0.58
CHD3-211ENST00000481999 CEACAM3P40198 252 aa11.43□□□□□ -0.58
CHD3-211ENST00000481999 PATE2Q6UY27 113 aa11.43□□□□□ -0.58
CHD3-211ENST00000481999 TMEM136Q6ZRR5 245 aa11.43□□□□□ -0.58
CHD3-211ENST00000481999 WNT10AQ9GZT5 417 aa11.43□□□□□ -0.58
CHD3-211ENST00000481999 KIR2DL5BA0A0G2JN68 375 aa11.42□□□□□ -0.58
CHD3-211ENST00000481999 KIR2DL5BA0A0G2JPC4 375 aa11.42□□□□□ -0.58
CHD3-211ENST00000481999 ZNF705FA8MVS1 300 aaPredicted RBP11.42□□□□□ -0.58
CHD3-211ENST00000481999 ZNF705DP0CH99 300 aaPredicted RBP11.42□□□□□ -0.58
CHD3-211ENST00000481999 ZNF705BP0CI00 300 aaPredicted RBP11.42□□□□□ -0.58
CHD3-211ENST00000481999 PYYP10082 97 aa11.42□□□□□ -0.58
CHD3-211ENST00000481999 PRB4P10163 310 aaPredicted RBP11.42□□□□□ -0.58
CHD3-211ENST00000481999 TCL1AP56279 114 aa11.42□□□□□ -0.58
CHD3-211ENST00000481999 ETFRF1Q6IPR1 90 aa11.42□□□□□ -0.58
CHD3-211ENST00000481999 BRD3OSQ6XYD6 125 aa11.42□□□□□ -0.58
CHD3-211ENST00000481999 Q6ZWC4 215 aa11.42□□□□□ -0.58
CHD3-211ENST00000481999 KIR2DL5AQ8N109 375 aa11.42□□□□□ -0.58
CHD3-211ENST00000481999 FAM168AQ92567 244 aa11.42□□□□□ -0.58
CHD3-211ENST00000481999 SERTAD4Q9NUC0 356 aa11.42□□□□□ -0.58
CHD3-211ENST00000481999 TEX15Q9BXT5 2789 aa11.42□□□□□ -0.58
CHD3-211ENST00000481999 AMY1AP04745 511 aa11.42□□□□□ -0.58
CHD3-211ENST00000481999 ORM2P19652 201 aa11.42□□□□□ -0.58
CHD3-211ENST00000481999 SSTP61278 116 aa11.42□□□□□ -0.58
CHD3-211ENST00000481999 USF2Q15853 346 aaPredicted RBP11.42□□□□□ -0.58
CHD3-211ENST00000481999 LEMD1Q68G75 181 aa11.42□□□□□ -0.58
CHD3-211ENST00000481999 ZNF329Q86UD4 541 aa11.42□□□□□ -0.58
CHD3-211ENST00000481999 STXBP6Q8NFX7 210 aa11.42□□□□□ -0.58
CHD3-211ENST00000481999 HSPB9Q9BQS6 159 aa11.42□□□□□ -0.58
CHD3-211ENST00000481999 SAMD10Q9BYL1 202 aa11.42□□□□□ -0.58
CHD3-211ENST00000481999 F11RQ9Y624 299 aaKnown RBP11.42□□□□□ -0.58
CHD3-211ENST00000481999 SPINK4O60575 86 aa11.41□□□□□ -0.58
CHD3-211ENST00000481999 HLA-DQA1P01909 254 aa11.41□□□□□ -0.58
CHD3-211ENST00000481999 OR10J3Q5JRS4 329 aa11.41□□□□□ -0.58
CHD3-211ENST00000481999 GNB4Q9HAV0 340 aa11.41□□□□□ -0.58
CHD3-211ENST00000481999 CUBNO60494 3623 aa11.41□□□□□ -0.58
CHD3-211ENST00000481999 PEX7O00628 323 aa11.41□□□□□ -0.58
CHD3-211ENST00000481999 C5orf64Q2M2E5 130 aa11.41□□□□□ -0.58
CHD3-211ENST00000481999 ASPHD1Q5U4P2 390 aa11.41□□□□□ -0.58
CHD3-211ENST00000481999 FAM231DQ6ZW35 169 aa11.41□□□□□ -0.58
CHD3-211ENST00000481999 KIR3DL3Q8N743 410 aa11.41□□□□□ -0.58
CHD3-211ENST00000481999 MAPK1IP1LQ8NDC0 245 aa11.41□□□□□ -0.58
CHD3-211ENST00000481999 FXYD5Q96DB9 178 aa11.41□□□□□ -0.58
CHD3-211ENST00000481999 BRS3P32247 399 aa11.4□□□□□ -0.58
CHD3-211ENST00000481999 SLC35B1P78383 322 aa11.4□□□□□ -0.58
CHD3-211ENST00000481999 PVRIGQ6DKI7 326 aa11.4□□□□□ -0.58
CHD3-211ENST00000481999 C1orf122Q6ZSJ8 110 aa11.4□□□□□ -0.58
CHD3-211ENST00000481999 LINC00305Q7Z4B0 112 aa11.4□□□□□ -0.58
CHD3-211ENST00000481999 C22orf15Q8WYQ4 148 aa11.4□□□□□ -0.58
CHD3-211ENST00000481999 TNFRSF19Q9NS68 423 aa11.4□□□□□ -0.58
CHD3-211ENST00000481999 CENPVL3A0A0U1RRI6 287 aa11.4□□□□□ -0.59
CHD3-211ENST00000481999 IZUMO1RA6ND01 250 aa11.4□□□□□ -0.59
CHD3-211ENST00000481999 F2Z2F3 143 aa11.4□□□□□ -0.59
CHD3-211ENST00000481999 H3BTX0 84 aa11.4□□□□□ -0.59
CHD3-211ENST00000481999 NDUFA3O95167 84 aa11.4□□□□□ -0.59
CHD3-211ENST00000481999 IGHV3-23P01764 117 aa11.4□□□□□ -0.59
CHD3-211ENST00000481999 CRYGCP07315 174 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms