RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 MED13LQ71F56 2210 aa-0.23□□□□□ -2.45
HPS3-205ENST00000478525 TRAV23DV6A0A075B6W5 121 aa-0.23□□□□□ -2.45
HPS3-205ENST00000478525 TRAV27A0A087WT01 109 aa-0.23□□□□□ -2.45
HPS3-205ENST00000478525 A0A096LPI6 279 aa-0.23□□□□□ -2.45
HPS3-205ENST00000478525 TRAV3A0A0B4J244 114 aa-0.23□□□□□ -2.45
HPS3-205ENST00000478525 LOC107984156A0A0G2JMH3 177 aa-0.23□□□□□ -2.45
HPS3-205ENST00000478525 EXOC1LA0A1B0GW35 172 aa-0.23□□□□□ -2.45
HPS3-205ENST00000478525 LRRN3E7EW58 273 aa-0.23□□□□□ -2.45
HPS3-205ENST00000478525 PPYP01298 95 aa-0.23□□□□□ -2.45
HPS3-205ENST00000478525 TCRBP04435 133 aa-0.23□□□□□ -2.45
HPS3-205ENST00000478525 TYMSP04818 313 aa-0.23□□□□□ -2.45
HPS3-205ENST00000478525 SMIM10L2AP0DMW4 78 aa-0.23□□□□□ -2.45
HPS3-205ENST00000478525 SMIM10L2BP0DMW5 78 aa-0.23□□□□□ -2.45
HPS3-205ENST00000478525 IFITM1P13164 125 aa-0.23□□□□□ -2.45
HPS3-205ENST00000478525 PPIBP23284 216 aaKnown RBP-0.23□□□□□ -2.45
HPS3-205ENST00000478525 MAP2K4P45985 399 aa-0.23□□□□□ -2.45
HPS3-205ENST00000478525 SNRPD2P62316 118 aaKnown RBP-0.23□□□□□ -2.45
HPS3-205ENST00000478525 PMAIP1Q13794 54 aa-0.23□□□□□ -2.45
HPS3-205ENST00000478525 HIST2H3PS2Q5TEC6 136 aa-0.23□□□□□ -2.45
HPS3-205ENST00000478525 CLEC6AQ6EIG7 209 aa-0.23□□□□□ -2.45
HPS3-205ENST00000478525 IDO2Q6ZQW0 420 aa-0.23□□□□□ -2.45
HPS3-205ENST00000478525 ARL17AQ8IVW1 177 aa-0.23□□□□□ -2.45
HPS3-205ENST00000478525 ANKRD29Q8N6D5 301 aa-0.23□□□□□ -2.45
HPS3-205ENST00000478525 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.23□□□□□ -2.45
HPS3-205ENST00000478525 SLC30A7Q8NEW0 376 aa-0.23□□□□□ -2.45
HPS3-205ENST00000478525 OR8D4Q8NGM9 314 aa-0.23□□□□□ -2.45
HPS3-205ENST00000478525 SLAMF6Q96DU3 332 aa-0.23□□□□□ -2.45
HPS3-205ENST00000478525 DCUN1D1Q96GG9 259 aa-0.23□□□□□ -2.45
HPS3-205ENST00000478525 CMSS1Q9BQ75 279 aaKnown RBP-0.23□□□□□ -2.45
HPS3-205ENST00000478525 PRADC1Q9BSG0 188 aa-0.23□□□□□ -2.45
HPS3-205ENST00000478525 MRPS26Q9BYN8 205 aaKnown RBP-0.23□□□□□ -2.45
HPS3-205ENST00000478525 UPF3BQ9BZI7 483 aaKnown RBP-0.23□□□□□ -2.45
HPS3-205ENST00000478525 PROK2Q9HC23 129 aa-0.23□□□□□ -2.45
HPS3-205ENST00000478525 IDI2-AS1Q9NZ38 188 aa-0.23□□□□□ -2.45
HPS3-205ENST00000478525 USE1Q9NZ43 259 aa-0.23□□□□□ -2.45
HPS3-205ENST00000478525 OPTCQ9UBM4 332 aa-0.23□□□□□ -2.45
HPS3-205ENST00000478525 PCTPQ9UKL6 214 aa-0.23□□□□□ -2.45
HPS3-205ENST00000478525 NUP98P52948 1817 aa-0.23□□□□□ -2.45
HPS3-205ENST00000478525 TRPM7Q96QT4 1865 aa-0.23□□□□□ -2.45
HPS3-205ENST00000478525 RTL1A6NKG5 1358 aa-0.23□□□□□ -2.45
HPS3-205ENST00000478525 STAB1Q9NY15 2570 aa-0.23□□□□□ -2.45
HPS3-205ENST00000478525 TENM4Q6N022 2769 aa-0.23□□□□□ -2.45
HPS3-205ENST00000478525 MYO5AQ9Y4I1 1855 aaKnown RBP-0.24□□□□□ -2.45
HPS3-205ENST00000478525 MUC12Q9UKN1 5478 aa-0.24□□□□□ -2.45
HPS3-205ENST00000478525 EEF1E1-BLOC1S5C9J1V9 151 aa-0.24□□□□□ -2.45
HPS3-205ENST00000478525 CYB5BO43169 146 aa-0.24□□□□□ -2.45
HPS3-205ENST00000478525 TIMM17BO60830 172 aa-0.24□□□□□ -2.45
HPS3-205ENST00000478525 GGCTO75223 188 aaKnown RBP-0.24□□□□□ -2.45
HPS3-205ENST00000478525 SULT1C4O75897 302 aa-0.24□□□□□ -2.45
HPS3-205ENST00000478525 GADD45GO95257 159 aa-0.24□□□□□ -2.45
HPS3-205ENST00000478525 IGHV3-33P01772 117 aa-0.24□□□□□ -2.45
HPS3-205ENST00000478525 SERPINE1P05121 402 aa-0.24□□□□□ -2.45
HPS3-205ENST00000478525 ISG15P05161 165 aa-0.24□□□□□ -2.45
HPS3-205ENST00000478525 LCN1P31025 176 aa-0.24□□□□□ -2.45
HPS3-205ENST00000478525 OMPP47874 163 aa-0.24□□□□□ -2.45
HPS3-205ENST00000478525 FXYD4P59646 89 aa-0.24□□□□□ -2.45
HPS3-205ENST00000478525 CDC42P60953 191 aa-0.24□□□□□ -2.45
HPS3-205ENST00000478525 MAGOHP61326 146 aaKnown RBP-0.24□□□□□ -2.45
HPS3-205ENST00000478525 PMS2P3Q13401 168 aa-0.24□□□□□ -2.45
HPS3-205ENST00000478525 BCL2L15Q5TBC7 163 aa-0.24□□□□□ -2.45
HPS3-205ENST00000478525 AADACL4Q5VUY2 407 aa-0.24□□□□□ -2.45
HPS3-205ENST00000478525 GLIPR1L1Q6UWM5 242 aa-0.24□□□□□ -2.45
HPS3-205ENST00000478525 Q86TA4 180 aa-0.24□□□□□ -2.45
HPS3-205ENST00000478525 RIBC1Q8N443 379 aaPredicted RBP-0.24□□□□□ -2.45
HPS3-205ENST00000478525 BORCS7Q96B45 105 aa-0.24□□□□□ -2.45
HPS3-205ENST00000478525 PLEKHB2Q96CS7 222 aa-0.24□□□□□ -2.45
HPS3-205ENST00000478525 CCDC94Q9BW85 323 aaPredicted RBP-0.24□□□□□ -2.45
HPS3-205ENST00000478525 AGPAT3Q9NRZ7 376 aa-0.24□□□□□ -2.45
HPS3-205ENST00000478525 TVP23BQ9NYZ1 205 aa-0.24□□□□□ -2.45
HPS3-205ENST00000478525 FBXO5Q9UKT4 447 aa-0.24□□□□□ -2.45
HPS3-205ENST00000478525 NOSIPQ9Y314 301 aaKnown RBP-0.24□□□□□ -2.45
HPS3-205ENST00000478525 BCL9O00512 1426 aa-0.24□□□□□ -2.45
HPS3-205ENST00000478525 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.24□□□□□ -2.45
HPS3-205ENST00000478525 PTPN13Q12923 2485 aa-0.24□□□□□ -2.45
HPS3-205ENST00000478525 RIMBP3CA6NJZ7 1639 aa-0.24□□□□□ -2.45
HPS3-205ENST00000478525 RIMBP3BA6NNM3 1639 aa-0.24□□□□□ -2.45
HPS3-205ENST00000478525 RIMBP3Q9UFD9 1639 aa-0.24□□□□□ -2.45
HPS3-205ENST00000478525 MAP2P11137 1827 aaKnown RBP-0.24□□□□□ -2.45
HPS3-205ENST00000478525 CADP27708 2225 aa-0.25□□□□□ -2.45
HPS3-205ENST00000478525 TRAV26-2A0A0B4J265 109 aa-0.25□□□□□ -2.45
HPS3-205ENST00000478525 SMIM23A6NLE4 172 aa-0.25□□□□□ -2.45
HPS3-205ENST00000478525 TRPC5OSA6NMA1 111 aa-0.25□□□□□ -2.45
HPS3-205ENST00000478525 HSBP1L1C9JCN9 74 aa-0.25□□□□□ -2.45
HPS3-205ENST00000478525 GOLGA8KD6RF30 607 aa-0.25□□□□□ -2.45
HPS3-205ENST00000478525 BUB1B-PAK6H3BSN5 160 aa-0.25□□□□□ -2.45
HPS3-205ENST00000478525 M0QZ92 97 aa-0.25□□□□□ -2.45
HPS3-205ENST00000478525 M0R233 179 aa-0.25□□□□□ -2.45
HPS3-205ENST00000478525 LYRM1O43325 122 aa-0.25□□□□□ -2.45
HPS3-205ENST00000478525 HIST1H1TP22492 207 aaPredicted RBP-0.25□□□□□ -2.45
HPS3-205ENST00000478525 ETV6P41212 452 aa-0.25□□□□□ -2.45
HPS3-205ENST00000478525 RAB5CP51148 216 aa-0.25□□□□□ -2.45
HPS3-205ENST00000478525 CLDN12P56749 244 aa-0.25□□□□□ -2.45
HPS3-205ENST00000478525 MYL6P60660 151 aa-0.25□□□□□ -2.45
HPS3-205ENST00000478525 RPL37P61927 97 aaKnown RBP-0.25□□□□□ -2.45
HPS3-205ENST00000478525 RANP62826 216 aaKnown RBP-0.25□□□□□ -2.45
HPS3-205ENST00000478525 COX6A2Q02221 97 aa-0.25□□□□□ -2.45
HPS3-205ENST00000478525 EIF3IQ13347 325 aaKnown RBP-0.25□□□□□ -2.45
HPS3-205ENST00000478525 KRR1Q13601 381 aaKnown RBP-0.25□□□□□ -2.45
HPS3-205ENST00000478525 ASB16-AS1Q495Z4 193 aa-0.25□□□□□ -2.45
HPS3-205ENST00000478525 OCIAD2Q56VL3 154 aa-0.25□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms