RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 OR5AN1Q8NGI8 311 aa10.28□□□□□ -0.76
RTFDC1-207ENST00000477573 FGFBP3Q8TAT2 258 aa10.28□□□□□ -0.76
RTFDC1-207ENST00000477573 FREM1Q5H8C1 2179 aa10.27□□□□□ -0.77
RTFDC1-207ENST00000477573 A0A096LPE4 126 aa10.27□□□□□ -0.77
RTFDC1-207ENST00000477573 A0A1W2PPZ6 126 aa10.27□□□□□ -0.77
RTFDC1-207ENST00000477573 J3KT08 172 aa10.27□□□□□ -0.77
RTFDC1-207ENST00000477573 SNCGO76070 127 aa10.27□□□□□ -0.77
RTFDC1-207ENST00000477573 RBP4P02753 201 aa10.27□□□□□ -0.77
RTFDC1-207ENST00000477573 CSN3P07498 182 aa10.27□□□□□ -0.77
RTFDC1-207ENST00000477573 ANXA2RQ3ZCQ2 193 aa10.27□□□□□ -0.77
RTFDC1-207ENST00000477573 PQLC2Q6ZP29 291 aa10.27□□□□□ -0.77
RTFDC1-207ENST00000477573 ZNF747Q9BV97 191 aa10.27□□□□□ -0.77
RTFDC1-207ENST00000477573 IDI2-AS1Q9NZ38 188 aa10.27□□□□□ -0.77
RTFDC1-207ENST00000477573 URB1O60287 2271 aaKnown RBP10.27□□□□□ -0.77
RTFDC1-207ENST00000477573 TRBV20-1A0A075B6N2 111 aa10.26□□□□□ -0.77
RTFDC1-207ENST00000477573 A0A1B0GXF2 115 aa10.26□□□□□ -0.77
RTFDC1-207ENST00000477573 GLRXP35754 106 aa10.26□□□□□ -0.77
RTFDC1-207ENST00000477573 UCNP55089 124 aa10.26□□□□□ -0.77
RTFDC1-207ENST00000477573 TEN1Q86WV5 123 aa10.26□□□□□ -0.77
RTFDC1-207ENST00000477573 Q8N7P7 452 aa10.26□□□□□ -0.77
RTFDC1-207ENST00000477573 CCL28Q9NRJ3 127 aa10.26□□□□□ -0.77
RTFDC1-207ENST00000477573 HCFC1P51610 2035 aa10.26□□□□□ -0.77
RTFDC1-207ENST00000477573 CEP250Q9BV73 2442 aa10.26□□□□□ -0.77
RTFDC1-207ENST00000477573 TCRBV4S1A1TA0A5B7 111 aa10.26□□□□□ -0.77
RTFDC1-207ENST00000477573 GCHFRP30047 84 aa10.26□□□□□ -0.77
RTFDC1-207ENST00000477573 MALLQ13021 153 aa10.26□□□□□ -0.77
RTFDC1-207ENST00000477573 NUP35Q8NFH5 326 aa10.26□□□□□ -0.77
RTFDC1-207ENST00000477573 OR10J6PQ8NGY7 276 aa10.26□□□□□ -0.77
RTFDC1-207ENST00000477573 RASL10AQ92737 203 aa10.26□□□□□ -0.77
RTFDC1-207ENST00000477573 SSBP3Q9BWW4 388 aaPredicted RBP10.26□□□□□ -0.77
RTFDC1-207ENST00000477573 WDR83OSQ9Y284 106 aa10.26□□□□□ -0.77
RTFDC1-207ENST00000477573 SS18L1O75177 396 aaPredicted RBP10.25□□□□□ -0.77
RTFDC1-207ENST00000477573 DEFA4P12838 97 aa10.25□□□□□ -0.77
RTFDC1-207ENST00000477573 MYOD1P15172 320 aa10.25□□□□□ -0.77
RTFDC1-207ENST00000477573 CSN1S1P47710 185 aa10.25□□□□□ -0.77
RTFDC1-207ENST00000477573 TAL2Q16559 108 aa10.25□□□□□ -0.77
RTFDC1-207ENST00000477573 Q6P435 159 aa10.25□□□□□ -0.77
RTFDC1-207ENST00000477573 BORCS8Q96FH0 119 aa10.25□□□□□ -0.77
RTFDC1-207ENST00000477573 PIMREGQ9BSJ6 248 aa10.25□□□□□ -0.77
RTFDC1-207ENST00000477573 NHP2Q9NX24 153 aaKnown RBP10.25□□□□□ -0.77
RTFDC1-207ENST00000477573 IGKV1D-13A0A0B4J2D9 117 aa10.25□□□□□ -0.77
RTFDC1-207ENST00000477573 A0A1W2PPI3 338 aa10.25□□□□□ -0.77
RTFDC1-207ENST00000477573 A8MWL6 223 aa10.25□□□□□ -0.77
RTFDC1-207ENST00000477573 CLDN14O95500 239 aa10.25□□□□□ -0.77
RTFDC1-207ENST00000477573 IGKV1-13P0DP09 117 aa10.25□□□□□ -0.77
RTFDC1-207ENST00000477573 KIR2DS2P43631 304 aa10.25□□□□□ -0.77
RTFDC1-207ENST00000477573 RRN3P1Q2M238 152 aa10.25□□□□□ -0.77
RTFDC1-207ENST00000477573 CEND1Q8N111 149 aa10.25□□□□□ -0.77
RTFDC1-207ENST00000477573 ENY2Q9NPA8 101 aa10.25□□□□□ -0.77
RTFDC1-207ENST00000477573 C5orf49A4QMS7 147 aa10.24□□□□□ -0.77
RTFDC1-207ENST00000477573 RPS28P62857 69 aaKnown RBP10.24□□□□□ -0.77
RTFDC1-207ENST00000477573 IGFL3Q6UXB1 125 aa10.24□□□□□ -0.77
RTFDC1-207ENST00000477573 LINC00479Q96M42 142 aa10.24□□□□□ -0.77
RTFDC1-207ENST00000477573 HSD17B10Q99714 261 aaKnown RBP10.24□□□□□ -0.77
RTFDC1-207ENST00000477573 CELSR3Q9NYQ7 3312 aa10.24□□□□□ -0.77
RTFDC1-207ENST00000477573 F5H768 121 aa10.24□□□□□ -0.77
RTFDC1-207ENST00000477573 K7ERJ3 54 aa10.24□□□□□ -0.77
RTFDC1-207ENST00000477573 IGKV1-5P01602 117 aa10.24□□□□□ -0.77
RTFDC1-207ENST00000477573 RPL30P62888 115 aaKnown RBP10.24□□□□□ -0.77
RTFDC1-207ENST00000477573 Q6ZPA2 131 aa10.24□□□□□ -0.77
RTFDC1-207ENST00000477573 PPP1R27Q86WC6 154 aa10.24□□□□□ -0.77
RTFDC1-207ENST00000477573 FAM169BQ8N8A8 192 aa10.24□□□□□ -0.77
RTFDC1-207ENST00000477573 MCRIP2Q9BUT9 160 aaKnown RBP10.24□□□□□ -0.77
RTFDC1-207ENST00000477573 PTPRZ1P23471 2315 aaPredicted RBP10.23□□□□□ -0.77
RTFDC1-207ENST00000477573 RRHO14718 337 aa10.23□□□□□ -0.77
RTFDC1-207ENST00000477573 KLK10O43240 276 aa10.23□□□□□ -0.77
RTFDC1-207ENST00000477573 IGKV1-39P01597 117 aa10.23□□□□□ -0.77
RTFDC1-207ENST00000477573 IGLV2-8P01709 118 aa10.23□□□□□ -0.77
RTFDC1-207ENST00000477573 IGKV1D-39P04432 117 aa10.23□□□□□ -0.77
RTFDC1-207ENST00000477573 HBBP68871 147 aa10.23□□□□□ -0.77
RTFDC1-207ENST00000477573 RSPO4Q2I0M5 234 aaPredicted RBP10.23□□□□□ -0.77
RTFDC1-207ENST00000477573 AMTNQ6UX39 209 aa10.23□□□□□ -0.77
RTFDC1-207ENST00000477573 FAM214BQ7L5A3 538 aa10.23□□□□□ -0.77
RTFDC1-207ENST00000477573 ASCL5Q7RTU5 278 aa10.23□□□□□ -0.77
RTFDC1-207ENST00000477573 FAM19A5Q7Z5A7 132 aaPredicted RBP10.23□□□□□ -0.77
RTFDC1-207ENST00000477573 OR51H1Q8NH63 302 aa10.23□□□□□ -0.77
RTFDC1-207ENST00000477573 DLX4Q92988 240 aaPredicted RBP10.23□□□□□ -0.77
RTFDC1-207ENST00000477573 RASL11BQ9BPW5 248 aa10.23□□□□□ -0.77
RTFDC1-207ENST00000477573 CHAC1Q9BUX1 264 aa10.23□□□□□ -0.77
RTFDC1-207ENST00000477573 GGTLC3B5MD39 225 aa10.22□□□□□ -0.77
RTFDC1-207ENST00000477573 SMCPP49901 116 aaPredicted RBP10.22□□□□□ -0.77
RTFDC1-207ENST00000477573 IZUMO4Q1ZYL8 232 aa10.22□□□□□ -0.77
RTFDC1-207ENST00000477573 TM4SF20Q53R12 229 aa10.22□□□□□ -0.77
RTFDC1-207ENST00000477573 TREML4Q6UXN2 200 aa10.22□□□□□ -0.77
RTFDC1-207ENST00000477573 GPHA2Q96T91 129 aa10.22□□□□□ -0.77
RTFDC1-207ENST00000477573 LINC01587Q99440 93 aa10.22□□□□□ -0.77
RTFDC1-207ENST00000477573 KIR2DL4Q99706 377 aa10.22□□□□□ -0.77
RTFDC1-207ENST00000477573 FBXL15Q9H469 300 aa10.22□□□□□ -0.77
RTFDC1-207ENST00000477573 PRRC2CQ9Y520 2896 aaKnown RBP10.22□□□□□ -0.77
RTFDC1-207ENST00000477573 NPIPB6E9PJ23 425 aa10.22□□□□□ -0.77
RTFDC1-207ENST00000477573 RPL7P18124 248 aaKnown RBP10.22□□□□□ -0.77
RTFDC1-207ENST00000477573 COL8A1P27658 744 aa10.22□□□□□ -0.77
RTFDC1-207ENST00000477573 PIGCQ92535 297 aa10.22□□□□□ -0.77
RTFDC1-207ENST00000477573 ZDHHC16Q969W1 377 aa10.22□□□□□ -0.77
RTFDC1-207ENST00000477573 CARD19Q96LW7 228 aa10.22□□□□□ -0.77
RTFDC1-207ENST00000477573 IGF2BP2-AS1Q96M15 143 aa10.22□□□□□ -0.77
RTFDC1-207ENST00000477573 HEYLQ9NQ87 328 aaPredicted RBP10.22□□□□□ -0.77
RTFDC1-207ENST00000477573 IL36RNQ9UBH0 155 aa10.22□□□□□ -0.77
RTFDC1-207ENST00000477573 KLF12Q9Y4X4 402 aa10.22□□□□□ -0.77
RTFDC1-207ENST00000477573 LINC00694P0DN24 101 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms