RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 GAGE13Q4V321 117 aa15.26■□□□□ 0.03
VARS2-209ENST00000477288 GAGE2EQ4V326 116 aa15.26■□□□□ 0.03
VARS2-209ENST00000477288 MINOS1Q5TGZ0 78 aa15.26■□□□□ 0.03
VARS2-209ENST00000477288 EDA2RQ9HAV5 297 aa15.26■□□□□ 0.03
VARS2-209ENST00000477288 GAGE2DQ9UEU5 116 aa15.26■□□□□ 0.03
VARS2-209ENST00000477288 MINOS1-NBL1R4GNA1 71 aa15.26■□□□□ 0.03
VARS2-209ENST00000477288 PSG1P11464 419 aa15.26■□□□□ 0.03
VARS2-209ENST00000477288 RASL10AQ92737 203 aa15.26■□□□□ 0.03
VARS2-209ENST00000477288 DICER1Q9UPY3 1922 aaKnown RBP15.26■□□□□ 0.03
VARS2-209ENST00000477288 ERCC8Q13216 396 aa15.26■□□□□ 0.03
VARS2-209ENST00000477288 IGFL4Q6B9Z1 124 aa15.26■□□□□ 0.03
VARS2-209ENST00000477288 SLC25A39Q9BZJ4 359 aaPredicted RBP15.26■□□□□ 0.03
VARS2-209ENST00000477288 GGNQ86UU5 652 aa15.26■□□□□ 0.03
VARS2-209ENST00000477288 PSME4Q14997 1843 aa15.26■□□□□ 0.03
VARS2-209ENST00000477288 RTTNQ86VV8 2226 aa15.26■□□□□ 0.03
VARS2-209ENST00000477288 LYZL1Q6UWQ5 148 aa15.25■□□□□ 0.03
VARS2-209ENST00000477288 C1orf122Q6ZSJ8 110 aa15.25■□□□□ 0.03
VARS2-209ENST00000477288 FAM90A9PA6NNJ1 464 aa15.25■□□□□ 0.03
VARS2-209ENST00000477288 KLF17Q5JT82 389 aaPredicted RBP15.25■□□□□ 0.03
VARS2-209ENST00000477288 DTX1Q86Y01 620 aa15.25■□□□□ 0.03
VARS2-209ENST00000477288 SIGMAR1Q99720 223 aa15.25■□□□□ 0.03
VARS2-209ENST00000477288 A0A0A6YYD4 124 aa15.25■□□□□ 0.03
VARS2-209ENST00000477288 A8MXK9 166 aa15.25■□□□□ 0.03
VARS2-209ENST00000477288 TEX38Q6PEX7 206 aa15.25■□□□□ 0.03
VARS2-209ENST00000477288 SRRM5B3KS81 715 aa15.25■□□□□ 0.03
VARS2-209ENST00000477288 LINC01356Q8N9X3 169 aa15.24■□□□□ 0.03
VARS2-209ENST00000477288 ANKRD36A6QL64 1941 aa15.24■□□□□ 0.03
VARS2-209ENST00000477288 TRAV13-1A0A0B4J241 112 aa15.24■□□□□ 0.03
VARS2-209ENST00000477288 VWC2LB2RUY7 222 aa15.24■□□□□ 0.03
VARS2-209ENST00000477288 ITGB1BP1O14713 200 aa15.24■□□□□ 0.03
VARS2-209ENST00000477288 HSD52Q0P140 79 aa15.24■□□□□ 0.03
VARS2-209ENST00000477288 Q8TAT8 98 aa15.24■□□□□ 0.03
VARS2-209ENST00000477288 ANAPC10Q9UM13 185 aa15.24■□□□□ 0.03
VARS2-209ENST00000477288 HEPN1Q6WQI6 88 aa15.24■□□□□ 0.03
VARS2-209ENST00000477288 DEFB130BP0DP73 79 aa15.23■□□□□ 0.03
VARS2-209ENST00000477288 DEFB130AP0DP74 79 aa15.23■□□□□ 0.03
VARS2-209ENST00000477288 TREML4Q6UXN2 200 aa15.23■□□□□ 0.03
VARS2-209ENST00000477288 IGKV1D-8A0A087WSZ0 117 aa15.23■□□□□ 0.03
VARS2-209ENST00000477288 CD177Q8N6Q3 437 aa15.23■□□□□ 0.03
VARS2-209ENST00000477288 RNF114Q9Y508 228 aa15.23■□□□□ 0.03
VARS2-209ENST00000477288 TRBV7-1A0A0A6YYK4 115 aa15.23■□□□□ 0.03
VARS2-209ENST00000477288 CRYGSP22914 178 aa15.23■□□□□ 0.03
VARS2-209ENST00000477288 PATJQ8NI35 1801 aa15.23■□□□□ 0.03
VARS2-209ENST00000477288 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.23■□□□□ 0.03
VARS2-209ENST00000477288 SPSB3Q6PJ21 355 aa15.23■□□□□ 0.03
VARS2-209ENST00000477288 RNF166Q96A37 237 aaPredicted RBP15.23■□□□□ 0.03
VARS2-209ENST00000477288 PLEKHB2Q96CS7 222 aa15.23■□□□□ 0.03
VARS2-209ENST00000477288 IGKV1-12A0A0C4DH73 117 aa15.22■□□□□ 0.03
VARS2-209ENST00000477288 LINC00587B1AMM8 73 aa15.22■□□□□ 0.03
VARS2-209ENST00000477288 SH2D1AO60880 128 aa15.22■□□□□ 0.03
VARS2-209ENST00000477288 LY6HO94772 140 aa15.22■□□□□ 0.03
VARS2-209ENST00000477288 IGKV1D-12P01611 117 aa15.22■□□□□ 0.03
VARS2-209ENST00000477288 CD5P06127 495 aa15.22■□□□□ 0.03
VARS2-209ENST00000477288 Q0VFX4 171 aa15.22■□□□□ 0.03
VARS2-209ENST00000477288 OCIAD2Q56VL3 154 aa15.22■□□□□ 0.03
VARS2-209ENST00000477288 CSTL1Q9H114 145 aa15.22■□□□□ 0.03
VARS2-209ENST00000477288 WDR83OSQ9Y284 106 aa15.22■□□□□ 0.03
VARS2-209ENST00000477288 A6NNC1 897 aa15.22■□□□□ 0.03
VARS2-209ENST00000477288 ZNF138P52744 262 aa15.22■□□□□ 0.03
VARS2-209ENST00000477288 SP5Q6BEB4 398 aaPredicted RBP15.21■□□□□ 0.03
VARS2-209ENST00000477288 RNF223E7ERA6 249 aa15.21■□□□□ 0.03
VARS2-209ENST00000477288 C14orf178Q8N769 122 aaPredicted RBP15.21■□□□□ 0.03
VARS2-209ENST00000477288 A0A1B0GWJ7 208 aa15.21■□□□□ 0.03
VARS2-209ENST00000477288 SLC25A16P16260 332 aa15.21■□□□□ 0.03
VARS2-209ENST00000477288 BPESC1Q9GZL8 116 aa15.21■□□□□ 0.03
VARS2-209ENST00000477288 A0A087WWL8 130 aa15.21■□□□□ 0.02
VARS2-209ENST00000477288 OOSP1A8MZH6 123 aa15.21■□□□□ 0.02
VARS2-209ENST00000477288 M0R1W7 72 aa15.21■□□□□ 0.02
VARS2-209ENST00000477288 ZNF236Q9UL36 1845 aa15.2■□□□□ 0.02
VARS2-209ENST00000477288 EFNA2O43921 213 aa15.2■□□□□ 0.02
VARS2-209ENST00000477288 SMPXQ9UHP9 88 aa15.2■□□□□ 0.02
VARS2-209ENST00000477288 LYPD3O95274 346 aa15.2■□□□□ 0.02
VARS2-209ENST00000477288 COL8A2P25067 703 aa15.2■□□□□ 0.02
VARS2-209ENST00000477288 GGTLC1Q9BX51 225 aa15.2■□□□□ 0.02
VARS2-209ENST00000477288 LEPROTO15243 131 aa15.2■□□□□ 0.02
VARS2-209ENST00000477288 C5orf64Q2M2E5 130 aa15.2■□□□□ 0.02
VARS2-209ENST00000477288 H0YIZ8 118 aa15.2■□□□□ 0.02
VARS2-209ENST00000477288 BUB1B-PAK6H3BSN5 160 aa15.2■□□□□ 0.02
VARS2-209ENST00000477288 HIST1H2BKO60814 126 aa15.2■□□□□ 0.02
VARS2-209ENST00000477288 HIST1H2BJP06899 126 aa15.2■□□□□ 0.02
VARS2-209ENST00000477288 HIST1H2BOP23527 126 aa15.2■□□□□ 0.02
VARS2-209ENST00000477288 HIST1H2BBP33778 126 aa15.2■□□□□ 0.02
VARS2-209ENST00000477288 HIST1H2BDP58876 126 aa15.2■□□□□ 0.02
VARS2-209ENST00000477288 HIST1H2BCP62807 126 aa15.2■□□□□ 0.02
VARS2-209ENST00000477288 ID3Q02535 119 aa15.2■□□□□ 0.02
VARS2-209ENST00000477288 HIST2H2BEQ16778 126 aa15.2■□□□□ 0.02
VARS2-209ENST00000477288 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.2■□□□□ 0.02
VARS2-209ENST00000477288 C2orf82Q6UX34 121 aa15.2■□□□□ 0.02
VARS2-209ENST00000477288 SLC25A48Q6ZT89 311 aaKnown RBP15.2■□□□□ 0.02
VARS2-209ENST00000477288 HIST1H2BHQ93079 126 aa15.2■□□□□ 0.02
VARS2-209ENST00000477288 HIST1H2BNQ99877 126 aa15.2■□□□□ 0.02
VARS2-209ENST00000477288 HIST1H2BMQ99879 126 aa15.2■□□□□ 0.02
VARS2-209ENST00000477288 TRAV8-3A0A0A6YYJ7 113 aa15.2■□□□□ 0.02
VARS2-209ENST00000477288 TRAV3A0A0B4J244 114 aa15.2■□□□□ 0.02
VARS2-209ENST00000477288 TNFRSF6BO95407 300 aa15.2■□□□□ 0.02
VARS2-209ENST00000477288 SS18Q15532 418 aa15.19■□□□□ 0.02
VARS2-209ENST00000477288 C1QTNF4Q9BXJ3 329 aa15.19■□□□□ 0.02
VARS2-209ENST00000477288 PSPNO60542 156 aa15.19■□□□□ 0.02
VARS2-209ENST00000477288 NDUFAF3Q9BU61 184 aa15.19■□□□□ 0.02
VARS2-209ENST00000477288 BCL6BQ8N143 479 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms