RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 Q9H3A6 140 aa11.14□□□□□ -0.63
UBXN11-214ENST00000475591 UBTD1Q9HAC8 227 aa11.14□□□□□ -0.63
UBXN11-214ENST00000475591 MED13LQ71F56 2210 aa11.14□□□□□ -0.63
UBXN11-214ENST00000475591 A0A1B0GV90 55 aa11.14□□□□□ -0.63
UBXN11-214ENST00000475591 PLP1P60201 277 aa11.14□□□□□ -0.63
UBXN11-214ENST00000475591 UBE2G1P62253 170 aa11.14□□□□□ -0.63
UBXN11-214ENST00000475591 NDPQ00604 133 aa11.14□□□□□ -0.63
UBXN11-214ENST00000475591 DTX2Q86UW9 622 aa11.14□□□□□ -0.63
UBXN11-214ENST00000475591 ZNF664Q8N3J9 261 aa11.14□□□□□ -0.63
UBXN11-214ENST00000475591 SLC25A39Q9BZJ4 359 aaPredicted RBP11.14□□□□□ -0.63
UBXN11-214ENST00000475591 C7orf69Q9H7B7 122 aa11.14□□□□□ -0.63
UBXN11-214ENST00000475591 A6NNC1 897 aa11.13□□□□□ -0.63
UBXN11-214ENST00000475591 NDUFA3O95167 84 aa11.13□□□□□ -0.63
UBXN11-214ENST00000475591 GPR6P46095 362 aaPredicted RBP11.13□□□□□ -0.63
UBXN11-214ENST00000475591 PKIAP61925 76 aa11.13□□□□□ -0.63
UBXN11-214ENST00000475591 TMEM183BQ1AE95 376 aa11.13□□□□□ -0.63
UBXN11-214ENST00000475591 LINC00322Q6ZN03 302 aaPredicted RBP11.13□□□□□ -0.63
UBXN11-214ENST00000475591 CEACAM3P40198 252 aa11.13□□□□□ -0.63
UBXN11-214ENST00000475591 BCL6BQ8N143 479 aaPredicted RBP11.13□□□□□ -0.63
UBXN11-214ENST00000475591 EXOC3-AS1Q8N2X6 119 aa11.13□□□□□ -0.63
UBXN11-214ENST00000475591 NPBQ8NG41 125 aa11.13□□□□□ -0.63
UBXN11-214ENST00000475591 MBD6Q96DN6 1003 aa11.13□□□□□ -0.63
UBXN11-214ENST00000475591 GNB4Q9HAV0 340 aa11.13□□□□□ -0.63
UBXN11-214ENST00000475591 ZNF586Q9NXT0 402 aa11.13□□□□□ -0.63
UBXN11-214ENST00000475591 TRAV8-1A0A0A6YYK1 113 aa11.12□□□□□ -0.63
UBXN11-214ENST00000475591 NCBP2LA6PVI3 153 aaKnown RBP11.12□□□□□ -0.63
UBXN11-214ENST00000475591 HOXB4P17483 251 aaPredicted RBP11.12□□□□□ -0.63
UBXN11-214ENST00000475591 C5orf64Q2M2E5 130 aa11.12□□□□□ -0.63
UBXN11-214ENST00000475591 BAGE3Q86Y29 109 aa11.12□□□□□ -0.63
UBXN11-214ENST00000475591 C17orf77Q96MU5 243 aa11.12□□□□□ -0.63
UBXN11-214ENST00000475591 MS4A10Q96PG2 267 aa11.12□□□□□ -0.63
UBXN11-214ENST00000475591 AMY1AP04745 511 aa11.12□□□□□ -0.63
UBXN11-214ENST00000475591 ASCL2Q99929 193 aa11.12□□□□□ -0.63
UBXN11-214ENST00000475591 TRBV9A0A0B4J1U6 114 aa11.11□□□□□ -0.63
UBXN11-214ENST00000475591 IZUMO1RA6ND01 250 aa11.11□□□□□ -0.63
UBXN11-214ENST00000475591 TSTD3H0UI37 97 aa11.11□□□□□ -0.63
UBXN11-214ENST00000475591 C19orf84I3L1E1 186 aa11.11□□□□□ -0.63
UBXN11-214ENST00000475591 SCGB1D1O95968 90 aa11.11□□□□□ -0.63
UBXN11-214ENST00000475591 DDTP30046 118 aa11.11□□□□□ -0.63
UBXN11-214ENST00000475591 DEFA6Q01524 100 aa11.11□□□□□ -0.63
UBXN11-214ENST00000475591 FAM231DQ6ZW35 169 aa11.11□□□□□ -0.63
UBXN11-214ENST00000475591 NUP35Q8NFH5 326 aa11.11□□□□□ -0.63
UBXN11-214ENST00000475591 ATG101Q9BSB4 218 aa11.11□□□□□ -0.63
UBXN11-214ENST00000475591 CELSR1Q9NYQ6 3014 aa11.11□□□□□ -0.63
UBXN11-214ENST00000475591 VWC2LB2RUY7 222 aa11.11□□□□□ -0.63
UBXN11-214ENST00000475591 BMPR1BO00238 502 aa11.11□□□□□ -0.63
UBXN11-214ENST00000475591 TCRAP04437 139 aa11.11□□□□□ -0.63
UBXN11-214ENST00000475591 G0S2P27469 103 aa11.11□□□□□ -0.63
UBXN11-214ENST00000475591 SLAQ13239 276 aa11.11□□□□□ -0.63
UBXN11-214ENST00000475591 GDF5OSQ5U4N7 250 aa11.11□□□□□ -0.63
UBXN11-214ENST00000475591 Q6ZWC4 215 aa11.11□□□□□ -0.63
UBXN11-214ENST00000475591 C5orf17Q8NAS9 161 aa11.11□□□□□ -0.63
UBXN11-214ENST00000475591 C14orf144Q96I85 54 aa11.11□□□□□ -0.63
UBXN11-214ENST00000475591 RCHY1Q96PM5 261 aa11.11□□□□□ -0.63
UBXN11-214ENST00000475591 MRPL27Q9P0M9 148 aaKnown RBP11.11□□□□□ -0.63
UBXN11-214ENST00000475591 CBY1Q9Y3M2 126 aa11.11□□□□□ -0.63
UBXN11-214ENST00000475591 KLF12Q9Y4X4 402 aa11.11□□□□□ -0.63
UBXN11-214ENST00000475591 WNK2Q9Y3S1 2297 aa11.11□□□□□ -0.63
UBXN11-214ENST00000475591 IGHV3-23P01764 117 aa11.1□□□□□ -0.63
UBXN11-214ENST00000475591 WDR73Q6P4I2 378 aa11.1□□□□□ -0.63
UBXN11-214ENST00000475591 FANCD2OSQ96PS1 177 aa11.1□□□□□ -0.63
UBXN11-214ENST00000475591 NEU1Q99519 415 aa11.1□□□□□ -0.63
UBXN11-214ENST00000475591 AKAP6Q13023 2319 aa11.1□□□□□ -0.63
UBXN11-214ENST00000475591 SRIP30626 198 aa11.1□□□□□ -0.63
UBXN11-214ENST00000475591 C16orf54Q6UWD8 224 aa11.1□□□□□ -0.63
UBXN11-214ENST00000475591 GRAMD2BQ96HH9 432 aa11.1□□□□□ -0.63
UBXN11-214ENST00000475591 GPR82Q96P67 336 aa11.1□□□□□ -0.63
UBXN11-214ENST00000475591 SRSF8Q9BRL6 282 aaKnown RBP11.1□□□□□ -0.63
UBXN11-214ENST00000475591 MLST8Q9BVC4 326 aa11.1□□□□□ -0.63
UBXN11-214ENST00000475591 RNF114Q9Y508 228 aa11.1□□□□□ -0.63
UBXN11-214ENST00000475591 HIGD1CA8MV81 97 aa11.09□□□□□ -0.63
UBXN11-214ENST00000475591 IL4P05112 153 aa11.09□□□□□ -0.63
UBXN11-214ENST00000475591 USF2Q15853 346 aaPredicted RBP11.09□□□□□ -0.63
UBXN11-214ENST00000475591 TCF24Q7RTU0 167 aa11.09□□□□□ -0.63
UBXN11-214ENST00000475591 ZNF491Q8N8L2 437 aa11.09□□□□□ -0.63
UBXN11-214ENST00000475591 MT-ND6P03923 174 aa11.09□□□□□ -0.63
UBXN11-214ENST00000475591 Q0VG73 95 aa11.09□□□□□ -0.63
UBXN11-214ENST00000475591 FAM120AOSQ5T036 256 aa11.09□□□□□ -0.63
UBXN11-214ENST00000475591 ITLN2Q8WWU7 325 aaPredicted RBP11.09□□□□□ -0.63
UBXN11-214ENST00000475591 ARPC1AQ92747 370 aa11.09□□□□□ -0.63
UBXN11-214ENST00000475591 HSPB9Q9BQS6 159 aa11.09□□□□□ -0.63
UBXN11-214ENST00000475591 SSBP4Q9BWG4 385 aaPredicted RBP11.09□□□□□ -0.63
UBXN11-214ENST00000475591 TOMM40O96008 361 aa11.08□□□□□ -0.64
UBXN11-214ENST00000475591 LTAP01374 205 aa11.08□□□□□ -0.64
UBXN11-214ENST00000475591 GNLYP22749 145 aa11.08□□□□□ -0.64
UBXN11-214ENST00000475591 IQCJQ1A5X6 159 aa11.08□□□□□ -0.64
UBXN11-214ENST00000475591 GOLT1AQ6ZVE7 132 aa11.08□□□□□ -0.64
UBXN11-214ENST00000475591 SIRPDQ9H106 197 aa11.08□□□□□ -0.64
UBXN11-214ENST00000475591 PRORYQ9H606 182 aa11.08□□□□□ -0.64
UBXN11-214ENST00000475591 ZNF331Q9NQX6 463 aaPredicted RBP11.08□□□□□ -0.64
UBXN11-214ENST00000475591 IGLV11-55A0A075B6I3 123 aa11.08□□□□□ -0.64
UBXN11-214ENST00000475591 H3BRN7 92 aa11.08□□□□□ -0.64
UBXN11-214ENST00000475591 HLA-DQA1P01909 254 aa11.08□□□□□ -0.64
UBXN11-214ENST00000475591 APCSP02743 223 aa11.08□□□□□ -0.64
UBXN11-214ENST00000475591 HIST1H1EP10412 219 aaKnown RBP11.08□□□□□ -0.64
UBXN11-214ENST00000475591 TPPP2P59282 170 aa11.08□□□□□ -0.64
UBXN11-214ENST00000475591 CIARTQ8N365 385 aaPredicted RBP11.08□□□□□ -0.64
UBXN11-214ENST00000475591 Q8N6K4 173 aa11.08□□□□□ -0.64
UBXN11-214ENST00000475591 RNF125Q96EQ8 232 aa11.08□□□□□ -0.64
UBXN11-214ENST00000475591 FMC1Q96HJ9 113 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms