RNA–Protein interactions for RNA: ENST00000471948.5

SH3YL1-216, Transcript of SH3 and SYLF domain containing 1, humanhuman

TSL 2

Gene SH3YL1, Length 2,119 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3YL1-216ENST00000471948 TMEM136Q6ZRR5 245 aa17.34■□□□□ 0.37
SH3YL1-216ENST00000471948 TMEM256Q8N2U0 113 aa17.34■□□□□ 0.37
SH3YL1-216ENST00000471948 Q8N6K4 173 aa17.34■□□□□ 0.37
SH3YL1-216ENST00000471948 FMC1Q96HJ9 113 aa17.34■□□□□ 0.37
SH3YL1-216ENST00000471948 TMEM68Q96MH6 324 aa17.34■□□□□ 0.37
SH3YL1-216ENST00000471948 C7orf69Q9H7B7 122 aa17.34■□□□□ 0.37
SH3YL1-216ENST00000471948 AMY1AP04745 511 aa17.33■□□□□ 0.37
SH3YL1-216ENST00000471948 HOXB4P17483 251 aaPredicted RBP17.33■□□□□ 0.37
SH3YL1-216ENST00000471948 HES1Q14469 280 aa17.33■□□□□ 0.37
SH3YL1-216ENST00000471948 NHLRC2Q8NBF2 726 aa17.33■□□□□ 0.37
SH3YL1-216ENST00000471948 TOMM40O96008 361 aa17.33■□□□□ 0.36
SH3YL1-216ENST00000471948 HIST1H1EP10412 219 aaKnown RBP17.33■□□□□ 0.36
SH3YL1-216ENST00000471948 CDKN1AP38936 164 aa17.33■□□□□ 0.36
SH3YL1-216ENST00000471948 EFNA4P52798 201 aa17.33■□□□□ 0.36
SH3YL1-216ENST00000471948 ZNF48Q96MX3 618 aaPredicted RBP17.33■□□□□ 0.36
SH3YL1-216ENST00000471948 GPR82Q96P67 336 aa17.33■□□□□ 0.36
SH3YL1-216ENST00000471948 SIRPDQ9H106 197 aa17.33■□□□□ 0.36
SH3YL1-216ENST00000471948 Q9H3A6 140 aa17.33■□□□□ 0.36
SH3YL1-216ENST00000471948 OTORQ9NRC9 128 aa17.33■□□□□ 0.36
SH3YL1-216ENST00000471948 RNF24Q9Y225 148 aa17.33■□□□□ 0.36
SH3YL1-216ENST00000471948 ZFP36P26651 326 aaKnown RBP17.32■□□□□ 0.36
SH3YL1-216ENST00000471948 NUDT10Q8NFP7 164 aa17.32■□□□□ 0.36
SH3YL1-216ENST00000471948 NUDT11Q96G61 164 aa17.32■□□□□ 0.36
SH3YL1-216ENST00000471948 RBM14Q96PK6 669 aaKnown RBP17.32■□□□□ 0.36
SH3YL1-216ENST00000471948 ABCA4P78363 2273 aa17.32■□□□□ 0.36
SH3YL1-216ENST00000471948 TRAV30A0A087WSZ9 112 aa17.32■□□□□ 0.36
SH3YL1-216ENST00000471948 HLA-DQA1P01909 254 aa17.32■□□□□ 0.36
SH3YL1-216ENST00000471948 CMTM2Q8TAZ6 248 aa17.32■□□□□ 0.36
SH3YL1-216ENST00000471948 WIPF2Q8TF74 440 aaPredicted RBP17.32■□□□□ 0.36
SH3YL1-216ENST00000471948 MLST8Q9BVC4 326 aa17.32■□□□□ 0.36
SH3YL1-216ENST00000471948 TP53TG3Q9ULZ0 132 aa17.32■□□□□ 0.36
SH3YL1-216ENST00000471948 TBL2Q9Y4P3 447 aaKnown RBP17.32■□□□□ 0.36
SH3YL1-216ENST00000471948 HRNRQ86YZ3 2850 aaPredicted RBP17.31■□□□□ 0.36
SH3YL1-216ENST00000471948 USP9XQ93008 2570 aaPredicted RBP17.31■□□□□ 0.36
SH3YL1-216ENST00000471948 MYO18BQ8IUG5 2567 aa17.31■□□□□ 0.36
SH3YL1-216ENST00000471948 FRMD6-AS1P0C7T7 363 aa17.31■□□□□ 0.36
SH3YL1-216ENST00000471948 PAFAH1B2P68402 229 aa17.31■□□□□ 0.36
SH3YL1-216ENST00000471948 SRSF1Q07955 248 aaKnown RBP eCLIP17.31■□□□□ 0.36
SH3YL1-216ENST00000471948 UBTD1Q9HAC8 227 aa17.31■□□□□ 0.36
SH3YL1-216ENST00000471948 NAT8BQ9UHF3 227 aa17.31■□□□□ 0.36
SH3YL1-216ENST00000471948 GRIFINA4D1Z8 144 aa17.3■□□□□ 0.36
SH3YL1-216ENST00000471948 TCRAP04437 139 aa17.3■□□□□ 0.36
SH3YL1-216ENST00000471948 TCL1AP56279 114 aa17.3■□□□□ 0.36
SH3YL1-216ENST00000471948 TTC9CQ8N5M4 171 aa17.3■□□□□ 0.36
SH3YL1-216ENST00000471948 ARPC1AQ92747 370 aa17.3■□□□□ 0.36
SH3YL1-216ENST00000471948 SHANK2-AS3Q9BTD1 123 aa17.3■□□□□ 0.36
SH3YL1-216ENST00000471948 DCHS2Q6V1P9 2916 aa17.3■□□□□ 0.36
SH3YL1-216ENST00000471948 IGLV11-55A0A075B6I3 123 aa17.3■□□□□ 0.36
SH3YL1-216ENST00000471948 A0A1W2PRD5 423 aa17.3■□□□□ 0.36
SH3YL1-216ENST00000471948 A0A1W2PRF3 423 aa17.3■□□□□ 0.36
SH3YL1-216ENST00000471948 A0A1W2PRM7 423 aa17.3■□□□□ 0.36
SH3YL1-216ENST00000471948 H3BRN7 92 aa17.3■□□□□ 0.36
SH3YL1-216ENST00000471948 CD24P25063 80 aa17.3■□□□□ 0.36
SH3YL1-216ENST00000471948 LEMD1Q68G75 181 aa17.3■□□□□ 0.36
SH3YL1-216ENST00000471948 DYNAPQ8N1N2 210 aa17.3■□□□□ 0.36
SH3YL1-216ENST00000471948 IGHV2-70DA0A0C4DH43 119 aa17.29■□□□□ 0.36
SH3YL1-216ENST00000471948 A0A1B0GUS0 222 aa17.29■□□□□ 0.36
SH3YL1-216ENST00000471948 NUPR1O60356 82 aa17.29■□□□□ 0.36
SH3YL1-216ENST00000471948 LTAP01374 205 aa17.29■□□□□ 0.36
SH3YL1-216ENST00000471948 SNRPCP09234 159 aaKnown RBP17.29■□□□□ 0.36
SH3YL1-216ENST00000471948 USF2Q15853 346 aaPredicted RBP17.29■□□□□ 0.36
SH3YL1-216ENST00000471948 ASPHD1Q5U4P2 390 aa17.29■□□□□ 0.36
SH3YL1-216ENST00000471948 S100A7AQ86SG5 101 aa17.29■□□□□ 0.36
SH3YL1-216ENST00000471948 FAM103A1Q9BTL3 118 aaKnown RBP17.29■□□□□ 0.36
SH3YL1-216ENST00000471948 PPP1R14DQ9NXH3 145 aa17.29■□□□□ 0.36
SH3YL1-216ENST00000471948 ZNF586Q9NXT0 402 aa17.29■□□□□ 0.36
SH3YL1-216ENST00000471948 ZNF492Q9P255 531 aa17.29■□□□□ 0.36
SH3YL1-216ENST00000471948 SPTAN1Q13813 2472 aaKnown RBP17.29■□□□□ 0.36
SH3YL1-216ENST00000471948 IQCJQ1A5X6 159 aa17.29■□□□□ 0.36
SH3YL1-216ENST00000471948 FBLN7Q53RD9 439 aa17.29■□□□□ 0.36
SH3YL1-216ENST00000471948 TSKUQ8WUA8 353 aa17.29■□□□□ 0.36
SH3YL1-216ENST00000471948 FAM168AQ92567 244 aa17.29■□□□□ 0.36
SH3YL1-216ENST00000471948 FANCD2OSQ96PS1 177 aa17.29■□□□□ 0.36
SH3YL1-216ENST00000471948 NEU1Q99519 415 aa17.29■□□□□ 0.36
SH3YL1-216ENST00000471948 ZNF331Q9NQX6 463 aaPredicted RBP17.29■□□□□ 0.36
SH3YL1-216ENST00000471948 TRBV6-1A0A0K0K1D8 114 aa17.28■□□□□ 0.36
SH3YL1-216ENST00000471948 WI2-2373I1.2A0A1W2PRP0 233 aa17.28■□□□□ 0.36
SH3YL1-216ENST00000471948 NDUFS7O75251 213 aa17.28■□□□□ 0.36
SH3YL1-216ENST00000471948 TPPP2P59282 170 aa17.28■□□□□ 0.36
SH3YL1-216ENST00000471948 OR10J3Q5JRS4 329 aa17.28■□□□□ 0.36
SH3YL1-216ENST00000471948 ZNF491Q8N8L2 437 aa17.28■□□□□ 0.36
SH3YL1-216ENST00000471948 SPINK4O60575 86 aa17.27■□□□□ 0.36
SH3YL1-216ENST00000471948 MFAP4P55083 255 aa17.27■□□□□ 0.36
SH3YL1-216ENST00000471948 LINC00310P59036 64 aa17.27■□□□□ 0.36
SH3YL1-216ENST00000471948 CT83Q5H943 113 aa17.27■□□□□ 0.36
SH3YL1-216ENST00000471948 BPIFA4PQ86YQ2 179 aa17.27■□□□□ 0.36
SH3YL1-216ENST00000471948 MRPL54Q6P161 138 aaKnown RBP17.27■□□□□ 0.35
SH3YL1-216ENST00000471948 LYPD1Q8N2G4 141 aa17.27■□□□□ 0.35
SH3YL1-216ENST00000471948 RNF125Q96EQ8 232 aa17.27■□□□□ 0.35
SH3YL1-216ENST00000471948 NCBP2LA6PVI3 153 aaKnown RBP17.26■□□□□ 0.35
SH3YL1-216ENST00000471948 SERF1AO75920 110 aa17.26■□□□□ 0.35
SH3YL1-216ENST00000471948 CA1P00915 261 aaPredicted RBP17.26■□□□□ 0.35
SH3YL1-216ENST00000471948 TMEM11P17152 192 aa17.26■□□□□ 0.35
SH3YL1-216ENST00000471948 UBE2E1P51965 193 aa17.26■□□□□ 0.35
SH3YL1-216ENST00000471948 BAGE3Q86Y29 109 aa17.26■□□□□ 0.35
SH3YL1-216ENST00000471948 IGFBPL1Q8WX77 278 aa17.26■□□□□ 0.35
SH3YL1-216ENST00000471948 SLC35B1P78383 322 aa17.26■□□□□ 0.35
SH3YL1-216ENST00000471948 NUP35Q8NFH5 326 aa17.26■□□□□ 0.35
SH3YL1-216ENST00000471948 OR4F17Q8NGA8 305 aa17.26■□□□□ 0.35
SH3YL1-216ENST00000471948 MS4A10Q96PG2 267 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms