RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 CTAG1AP78358 180 aa14.69□□□□□ -0.06
COL20A1-205ENST00000471582 TTC9CQ8N5M4 171 aa14.69□□□□□ -0.06
COL20A1-205ENST00000471582 TMEM68Q96MH6 324 aa14.69□□□□□ -0.06
COL20A1-205ENST00000471582 FAM103A1Q9BTL3 118 aaKnown RBP14.69□□□□□ -0.06
COL20A1-205ENST00000471582 TOX4O94842 621 aa14.68□□□□□ -0.06
COL20A1-205ENST00000471582 HIST1H1EP10412 219 aaKnown RBP14.68□□□□□ -0.06
COL20A1-205ENST00000471582 ASPHD1Q5U4P2 390 aa14.68□□□□□ -0.06
COL20A1-205ENST00000471582 LEMD1Q68G75 181 aa14.68□□□□□ -0.06
COL20A1-205ENST00000471582 NHLRC2Q8NBF2 726 aa14.68□□□□□ -0.06
COL20A1-205ENST00000471582 MBD6Q96DN6 1003 aa14.68□□□□□ -0.06
COL20A1-205ENST00000471582 FMC1Q96HJ9 113 aa14.68□□□□□ -0.06
COL20A1-205ENST00000471582 SHANK2-AS3Q9BTD1 123 aa14.68□□□□□ -0.06
COL20A1-205ENST00000471582 Q9H3A6 140 aa14.68□□□□□ -0.06
COL20A1-205ENST00000471582 C7orf69Q9H7B7 122 aa14.68□□□□□ -0.06
COL20A1-205ENST00000471582 RNF24Q9Y225 148 aa14.68□□□□□ -0.06
COL20A1-205ENST00000471582 TRAV34A0A0B4J273 112 aa14.68□□□□□ -0.06
COL20A1-205ENST00000471582 CDPF1Q6NVV7 123 aa14.68□□□□□ -0.06
COL20A1-205ENST00000471582 GPR82Q96P67 336 aa14.68□□□□□ -0.06
COL20A1-205ENST00000471582 OTORQ9NRC9 128 aa14.68□□□□□ -0.06
COL20A1-205ENST00000471582 SERTAD4Q9NUC0 356 aa14.68□□□□□ -0.06
COL20A1-205ENST00000471582 NCBP2LA6PVI3 153 aaKnown RBP14.67□□□□□ -0.06
COL20A1-205ENST00000471582 SNURFLB1AK76 121 aa14.67□□□□□ -0.06
COL20A1-205ENST00000471582 LMO4P61968 165 aa14.67□□□□□ -0.06
COL20A1-205ENST00000471582 S100A7AQ86SG5 101 aa14.67□□□□□ -0.06
COL20A1-205ENST00000471582 IGFBPL1Q8WX77 278 aa14.67□□□□□ -0.06
COL20A1-205ENST00000471582 FANCD2OSQ96PS1 177 aa14.67□□□□□ -0.06
COL20A1-205ENST00000471582 PRDM13Q9H4Q3 707 aa14.67□□□□□ -0.06
COL20A1-205ENST00000471582 SPTAN1Q13813 2472 aaKnown RBP14.67□□□□□ -0.06
COL20A1-205ENST00000471582 IZUMO1RA6ND01 250 aa14.66□□□□□ -0.06
COL20A1-205ENST00000471582 H3BRN7 92 aa14.66□□□□□ -0.06
COL20A1-205ENST00000471582 GATCO43716 136 aaKnown RBP14.66□□□□□ -0.06
COL20A1-205ENST00000471582 TCRAP04437 139 aa14.66□□□□□ -0.06
COL20A1-205ENST00000471582 SNRPCP09234 159 aaKnown RBP14.66□□□□□ -0.06
COL20A1-205ENST00000471582 TMEM11P17152 192 aa14.66□□□□□ -0.06
COL20A1-205ENST00000471582 RASL11AQ6T310 242 aa14.66□□□□□ -0.06
COL20A1-205ENST00000471582 GRAMD2BQ96HH9 432 aa14.66□□□□□ -0.06
COL20A1-205ENST00000471582 MLST8Q9BVC4 326 aa14.66□□□□□ -0.06
COL20A1-205ENST00000471582 C1RLQ9NZP8 487 aa14.66□□□□□ -0.06
COL20A1-205ENST00000471582 AMY1AP04745 511 aa14.66□□□□□ -0.06
COL20A1-205ENST00000471582 FAM106CPP0CH98 169 aa14.66□□□□□ -0.06
COL20A1-205ENST00000471582 MFAP4P55083 255 aa14.66□□□□□ -0.06
COL20A1-205ENST00000471582 NDPQ00604 133 aa14.66□□□□□ -0.06
COL20A1-205ENST00000471582 BPIFA4PQ86YQ2 179 aa14.66□□□□□ -0.06
COL20A1-205ENST00000471582 ZNF491Q8N8L2 437 aa14.66□□□□□ -0.06
COL20A1-205ENST00000471582 RNF125Q96EQ8 232 aa14.66□□□□□ -0.06
COL20A1-205ENST00000471582 TBX15Q96SF7 602 aa14.66□□□□□ -0.06
COL20A1-205ENST00000471582 CCL19Q99731 98 aa14.66□□□□□ -0.06
COL20A1-205ENST00000471582 BPESC1Q9GZL8 116 aa14.66□□□□□ -0.06
COL20A1-205ENST00000471582 THYN1Q9P016 225 aa14.66□□□□□ -0.06
COL20A1-205ENST00000471582 WI2-2373I1.2A0A1W2PRP0 233 aa14.65□□□□□ -0.06
COL20A1-205ENST00000471582 LTAP01374 205 aa14.65□□□□□ -0.06
COL20A1-205ENST00000471582 ESDP10768 282 aa14.65□□□□□ -0.06
COL20A1-205ENST00000471582 CRISP2P16562 243 aa14.65□□□□□ -0.06
COL20A1-205ENST00000471582 TMEM136Q6ZRR5 245 aa14.65□□□□□ -0.06
COL20A1-205ENST00000471582 NUDT10Q8NFP7 164 aa14.65□□□□□ -0.06
COL20A1-205ENST00000471582 NUDT11Q96G61 164 aa14.65□□□□□ -0.06
COL20A1-205ENST00000471582 LPAR2Q9HBW0 351 aa14.65□□□□□ -0.06
COL20A1-205ENST00000471582 ZNF586Q9NXT0 402 aa14.65□□□□□ -0.06
COL20A1-205ENST00000471582 GNG7O60262 68 aa14.64□□□□□ -0.07
COL20A1-205ENST00000471582 HLA-DQA1P01909 254 aa14.64□□□□□ -0.07
COL20A1-205ENST00000471582 GZMBP10144 247 aa14.64□□□□□ -0.07
COL20A1-205ENST00000471582 TCL1AP56279 114 aa14.64□□□□□ -0.07
COL20A1-205ENST00000471582 SRSF1Q07955 248 aaKnown RBP eCLIP14.64□□□□□ -0.07
COL20A1-205ENST00000471582 Q0VG73 95 aa14.64□□□□□ -0.07
COL20A1-205ENST00000471582 KLF17Q5JT82 389 aaPredicted RBP14.64□□□□□ -0.07
COL20A1-205ENST00000471582 WIPF2Q8TF74 440 aaPredicted RBP14.64□□□□□ -0.07
COL20A1-205ENST00000471582 ABCA1O95477 2261 aa14.64□□□□□ -0.07
COL20A1-205ENST00000471582 IGHV4-39P01824 125 aa14.64□□□□□ -0.07
COL20A1-205ENST00000471582 HLA-DRB1P01911 266 aa14.64□□□□□ -0.07
COL20A1-205ENST00000471582 FRMD6-AS1P0C7T7 363 aa14.64□□□□□ -0.07
COL20A1-205ENST00000471582 TMEM256Q8N2U0 113 aa14.64□□□□□ -0.07
COL20A1-205ENST00000471582 AJUBAQ96IF1 538 aa14.64□□□□□ -0.07
COL20A1-205ENST00000471582 NAT8BQ9UHF3 227 aa14.64□□□□□ -0.07
COL20A1-205ENST00000471582 IL4P05112 153 aa14.63□□□□□ -0.07
COL20A1-205ENST00000471582 BRS3P32247 399 aa14.63□□□□□ -0.07
COL20A1-205ENST00000471582 USF2Q15853 346 aaPredicted RBP14.63□□□□□ -0.07
COL20A1-205ENST00000471582 LYPD1Q8N2G4 141 aa14.63□□□□□ -0.07
COL20A1-205ENST00000471582 OR4F17Q8NGA8 305 aa14.63□□□□□ -0.07
COL20A1-205ENST00000471582 TSKUQ8WUA8 353 aa14.63□□□□□ -0.07
COL20A1-205ENST00000471582 FAM168AQ92567 244 aa14.63□□□□□ -0.07
COL20A1-205ENST00000471582 ZNF492Q9P255 531 aa14.63□□□□□ -0.07
COL20A1-205ENST00000471582 POLR3KQ9Y2Y1 108 aaPredicted RBP14.63□□□□□ -0.07
COL20A1-205ENST00000471582 TRBV19A0A075B6N1 114 aa14.62□□□□□ -0.07
COL20A1-205ENST00000471582 IGHV7-81A0A0B4J1V7 117 aa14.62□□□□□ -0.07
COL20A1-205ENST00000471582 TRBV6-1A0A0K0K1D8 114 aa14.62□□□□□ -0.07
COL20A1-205ENST00000471582 GRIFINA4D1Z8 144 aa14.62□□□□□ -0.07
COL20A1-205ENST00000471582 CA1P00915 261 aaPredicted RBP14.62□□□□□ -0.07
COL20A1-205ENST00000471582 IGLC2P0DOY2 106 aa14.62□□□□□ -0.07
COL20A1-205ENST00000471582 Q8N9W7 124 aa14.62□□□□□ -0.07
COL20A1-205ENST00000471582 C21orf62Q9NYP8 219 aa14.62□□□□□ -0.07
COL20A1-205ENST00000471582 F8W735 103 aaPredicted RBP14.62□□□□□ -0.07
COL20A1-205ENST00000471582 SCGB2A1O75556 95 aa14.62□□□□□ -0.07
COL20A1-205ENST00000471582 CT83Q5H943 113 aa14.62□□□□□ -0.07
COL20A1-205ENST00000471582 CMTM2Q8TAZ6 248 aa14.62□□□□□ -0.07
COL20A1-205ENST00000471582 TP53TG3Q9ULZ0 132 aa14.62□□□□□ -0.07
COL20A1-205ENST00000471582 RPH3ALQ9UNE2 315 aa14.62□□□□□ -0.07
COL20A1-205ENST00000471582 LRRK2Q5S007 2527 aa14.62□□□□□ -0.07
COL20A1-205ENST00000471582 A0A1B0GUS0 222 aa14.61□□□□□ -0.07
COL20A1-205ENST00000471582 H3BTX0 84 aa14.61□□□□□ -0.07
COL20A1-205ENST00000471582 SPINK4O60575 86 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms