RNA–Protein interactions for RNA: ENST00000468477.1

CDHR3-206, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-206ENST00000468477 TEN1Q86WV5 123 aa2.57□□□□□ -2
CDHR3-206ENST00000468477 LCN9Q8WX39 176 aa2.57□□□□□ -2
CDHR3-206ENST00000468477 COPS9Q8WXC6 57 aa2.57□□□□□ -2
CDHR3-206ENST00000468477 C16orf74Q96GX8 76 aa2.57□□□□□ -2
CDHR3-206ENST00000468477 C1orf147Q96MC9 270 aaPredicted RBP2.57□□□□□ -2
CDHR3-206ENST00000468477 LITAFQ99732 161 aa2.57□□□□□ -2
CDHR3-206ENST00000468477 DEFB126Q9BYW3 111 aa2.57□□□□□ -2
CDHR3-206ENST00000468477 NAA60Q9H7X0 242 aa2.57□□□□□ -2
CDHR3-206ENST00000468477 ANKRD12Q6UB98 2062 aa2.57□□□□□ -2
CDHR3-206ENST00000468477 RGS12O14924 1447 aa2.57□□□□□ -2
CDHR3-206ENST00000468477 YEATS2Q9ULM3 1422 aa2.57□□□□□ -2
CDHR3-206ENST00000468477 DLC1Q96QB1 1528 aa2.57□□□□□ -2
CDHR3-206ENST00000468477 MED1Q15648 1581 aaPredicted RBP2.57□□□□□ -2
CDHR3-206ENST00000468477 ALPK3Q96L96 1907 aa2.56□□□□□ -2
CDHR3-206ENST00000468477 MYO10Q9HD67 2058 aa2.56□□□□□ -2
CDHR3-206ENST00000468477 TRAV12-2A0A075B6T6 113 aa2.56□□□□□ -2
CDHR3-206ENST00000468477 TRGV10A0A0A0MS01 117 aa2.56□□□□□ -2
CDHR3-206ENST00000468477 GEMIN2O14893 280 aaKnown RBP2.56□□□□□ -2
CDHR3-206ENST00000468477 SYNGR2O43760 224 aa2.56□□□□□ -2
CDHR3-206ENST00000468477 ZNF432O94892 652 aa2.56□□□□□ -2
CDHR3-206ENST00000468477 NDUFB2O95178 105 aa2.56□□□□□ -2
CDHR3-206ENST00000468477 IGLV2-11P01706 119 aa2.56□□□□□ -2
CDHR3-206ENST00000468477 HLA-DQA1P01909 254 aa2.56□□□□□ -2
CDHR3-206ENST00000468477 HBDP02042 147 aa2.56□□□□□ -2
CDHR3-206ENST00000468477 CTSDP07339 412 aaPredicted RBP2.56□□□□□ -2
CDHR3-206ENST00000468477 TRGC1P0CF51 173 aa2.56□□□□□ -2
CDHR3-206ENST00000468477 ZNF286BP0CG31 522 aa2.56□□□□□ -2
CDHR3-206ENST00000468477 PTHLHP12272 177 aa2.56□□□□□ -2
CDHR3-206ENST00000468477 ZNF90Q03938 601 aa2.56□□□□□ -2
CDHR3-206ENST00000468477 AKR1C1Q04828 323 aa2.56□□□□□ -2
CDHR3-206ENST00000468477 Q1RN00 199 aa2.56□□□□□ -2
CDHR3-206ENST00000468477 TMEM155Q4W5P6 130 aa2.56□□□□□ -2
CDHR3-206ENST00000468477 CLLU1Q5K131 121 aa2.56□□□□□ -2
CDHR3-206ENST00000468477 ZNF705AQ6ZN79 300 aaPredicted RBP2.56□□□□□ -2
CDHR3-206ENST00000468477 TMEM91Q6ZNR0 172 aa2.56□□□□□ -2
CDHR3-206ENST00000468477 PCP2Q8IVA1 136 aa2.56□□□□□ -2
CDHR3-206ENST00000468477 ATOH7Q8N100 152 aa2.56□□□□□ -2
CDHR3-206ENST00000468477 ZFAND2AQ8N6M9 145 aa2.56□□□□□ -2
CDHR3-206ENST00000468477 Q8N976 141 aa2.56□□□□□ -2
CDHR3-206ENST00000468477 APCDD1LQ8NCL9 501 aa2.56□□□□□ -2
CDHR3-206ENST00000468477 CIRBP-AS1Q8TBR5 109 aa2.56□□□□□ -2
CDHR3-206ENST00000468477 SEC11CQ9BY50 192 aa2.56□□□□□ -2
CDHR3-206ENST00000468477 RPP21Q9H633 154 aaKnown RBP2.56□□□□□ -2
CDHR3-206ENST00000468477 XAGE1AQ9HD64 81 aa2.56□□□□□ -2
CDHR3-206ENST00000468477 FAM60AQ9NP50 221 aa2.56□□□□□ -2
CDHR3-206ENST00000468477 FKBP11Q9NYL4 201 aa2.56□□□□□ -2
CDHR3-206ENST00000468477 CHCHD2Q9Y6H1 151 aaPredicted RBP2.56□□□□□ -2
CDHR3-206ENST00000468477 CRB1P82279 1406 aa2.56□□□□□ -2
CDHR3-206ENST00000468477 RRBP1Q9P2E9 1410 aaKnown RBP2.56□□□□□ -2
CDHR3-206ENST00000468477 KDM5DQ9BY66 1539 aa2.56□□□□□ -2
CDHR3-206ENST00000468477 ZSWIM8A7E2V4 1837 aa2.56□□□□□ -2
CDHR3-206ENST00000468477 KIF20BQ96Q89 1820 aa2.56□□□□□ -2
CDHR3-206ENST00000468477 PLXNB1O43157 2135 aa2.56□□□□□ -2
CDHR3-206ENST00000468477 ZFP92A6NM28 416 aa2.55□□□□□ -2
CDHR3-206ENST00000468477 A8MWP4 228 aa2.55□□□□□ -2
CDHR3-206ENST00000468477 ARID1AO14497 2285 aa2.55□□□□□ -2
CDHR3-206ENST00000468477 RER1O15258 196 aa2.55□□□□□ -2
CDHR3-206ENST00000468477 SLC25A20O43772 301 aa2.55□□□□□ -2
CDHR3-206ENST00000468477 SOD1P00441 154 aa2.55□□□□□ -2
CDHR3-206ENST00000468477 IGKV1D-33P01593 117 aa2.55□□□□□ -2
CDHR3-206ENST00000468477 IGKV1-33P01594 117 aa2.55□□□□□ -2
CDHR3-206ENST00000468477 IGHV3-7P01780 117 aa2.55□□□□□ -2
CDHR3-206ENST00000468477 TRGV3P03979 118 aa2.55□□□□□ -2
CDHR3-206ENST00000468477 IGHV4-34P06331 123 aa2.55□□□□□ -2
CDHR3-206ENST00000468477 P0C879 139 aa2.55□□□□□ -2
CDHR3-206ENST00000468477 ZNF883P0CG24 379 aa2.55□□□□□ -2
CDHR3-206ENST00000468477 CCL3P10147 92 aa2.55□□□□□ -2
CDHR3-206ENST00000468477 SLC25A16P16260 332 aa2.55□□□□□ -2
CDHR3-206ENST00000468477 ZNF846Q147U1 533 aa2.55□□□□□ -2
CDHR3-206ENST00000468477 KISS1Q15726 138 aa2.55□□□□□ -2
CDHR3-206ENST00000468477 Q56UQ5 140 aa2.55□□□□□ -2
CDHR3-206ENST00000468477 C6orf52Q5T4I8 152 aa2.55□□□□□ -2
CDHR3-206ENST00000468477 BRWD3Q6RI45 1802 aa2.55□□□□□ -2
CDHR3-206ENST00000468477 SOSTDC1Q6X4U4 206 aa2.55□□□□□ -2
CDHR3-206ENST00000468477 NTM-AS1Q6ZSK4 140 aa2.55□□□□□ -2
CDHR3-206ENST00000468477 ADM2Q7Z4H4 148 aa2.55□□□□□ -2
CDHR3-206ENST00000468477 TOPBP1Q92547 1522 aa2.55□□□□□ -2
CDHR3-206ENST00000468477 RBMXL1Q96E39 390 aaKnown RBP2.55□□□□□ -2
CDHR3-206ENST00000468477 SCGB3A1Q96QR1 104 aa2.55□□□□□ -2
CDHR3-206ENST00000468477 OPRPNQ99935 248 aaPredicted RBP2.55□□□□□ -2
CDHR3-206ENST00000468477 VGLL1Q99990 258 aa2.55□□□□□ -2
CDHR3-206ENST00000468477 VAMP8Q9BV40 100 aa2.55□□□□□ -2
CDHR3-206ENST00000468477 AGPAT4-IT1Q9H0P7 198 aa2.55□□□□□ -2
CDHR3-206ENST00000468477 C11orf1Q9H5F2 150 aa2.55□□□□□ -2
CDHR3-206ENST00000468477 C16orf95Q9H693 158 aa2.55□□□□□ -2
CDHR3-206ENST00000468477 SDF2L1Q9HCN8 221 aa2.55□□□□□ -2
CDHR3-206ENST00000468477 LSM2Q9Y333 95 aaKnown RBP2.55□□□□□ -2
CDHR3-206ENST00000468477 LINC00588Q9Y4M8 146 aa2.55□□□□□ -2
CDHR3-206ENST00000468477 TRPM6Q9BX84 2022 aa2.54□□□□□ -2
CDHR3-206ENST00000468477 PTPRBP23467 1997 aa2.54□□□□□ -2
CDHR3-206ENST00000468477 TANC2Q9HCD6 1990 aa2.54□□□□□ -2
CDHR3-206ENST00000468477 SCN8AQ9UQD0 1980 aa2.54□□□□□ -2
CDHR3-206ENST00000468477 MYO5AQ9Y4I1 1855 aaKnown RBP2.54□□□□□ -2
CDHR3-206ENST00000468477 GLI3P10071 1580 aa2.54□□□□□ -2
CDHR3-206ENST00000468477 CFTRP13569 1480 aa2.54□□□□□ -2
CDHR3-206ENST00000468477 PTPRTO14522 1441 aa2.54□□□□□ -2
CDHR3-206ENST00000468477 TRBV20-1A0A075B6N2 111 aa2.54□□□□□ -2
CDHR3-206ENST00000468477 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.54□□□□□ -2
CDHR3-206ENST00000468477 IGHV1-3A0A0C4DH29 117 aa2.54□□□□□ -2
CDHR3-206ENST00000468477 C11orf94C9JXX5 98 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms