RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 AHDC1Q5TGY3 1603 aaPredicted RBP2.35□□□□□ -2.03
VPS50-209ENST00000467326 DICER1Q9UPY3 1922 aaKnown RBP2.34□□□□□ -2.03
VPS50-209ENST00000467326 MYOM3Q5VTT5 1437 aa2.34□□□□□ -2.03
VPS50-209ENST00000467326 DOCK3Q8IZD9 2030 aa2.34□□□□□ -2.03
VPS50-209ENST00000467326 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.34□□□□□ -2.03
VPS50-209ENST00000467326 TRAV27A0A087WT01 109 aa2.34□□□□□ -2.03
VPS50-209ENST00000467326 TRBV6-6A0A0A6YYG2 114 aa2.34□□□□□ -2.03
VPS50-209ENST00000467326 H3BMM0 161 aa2.34□□□□□ -2.03
VPS50-209ENST00000467326 CREBL2O60519 120 aaPredicted RBP2.34□□□□□ -2.03
VPS50-209ENST00000467326 PGLYRP1O75594 196 aaPredicted RBP2.34□□□□□ -2.03
VPS50-209ENST00000467326 MT-ND6P03923 174 aa2.34□□□□□ -2.03
VPS50-209ENST00000467326 TRGV3P03979 118 aa2.34□□□□□ -2.03
VPS50-209ENST00000467326 CCL3P10147 92 aa2.34□□□□□ -2.03
VPS50-209ENST00000467326 CSRP1P21291 193 aaKnown RBP2.34□□□□□ -2.03
VPS50-209ENST00000467326 NFYAP23511 347 aaPredicted RBP2.34□□□□□ -2.03
VPS50-209ENST00000467326 TGFBR1P36897 503 aa2.34□□□□□ -2.03
VPS50-209ENST00000467326 ARPP19P56211 112 aa2.34□□□□□ -2.03
VPS50-209ENST00000467326 QRFPP83859 136 aa2.34□□□□□ -2.03
VPS50-209ENST00000467326 PLGLB1Q02325 96 aa2.34□□□□□ -2.03
VPS50-209ENST00000467326 MIAQ16674 131 aa2.34□□□□□ -2.03
VPS50-209ENST00000467326 CLLU1Q5K131 121 aa2.34□□□□□ -2.03
VPS50-209ENST00000467326 NOXRED1Q6NXP6 359 aa2.34□□□□□ -2.03
VPS50-209ENST00000467326 LCN15Q6UWW0 184 aa2.34□□□□□ -2.03
VPS50-209ENST00000467326 C16orf47Q6ZP98 133 aaPredicted RBP2.34□□□□□ -2.03
VPS50-209ENST00000467326 Q6ZQT7 251 aa2.34□□□□□ -2.03
VPS50-209ENST00000467326 SNX29P2Q8IUI4 249 aa2.34□□□□□ -2.03
VPS50-209ENST00000467326 RPRMLQ8N4K4 120 aa2.34□□□□□ -2.03
VPS50-209ENST00000467326 OR4B1Q8NGF8 309 aa2.34□□□□□ -2.03
VPS50-209ENST00000467326 OR5D14Q8NGL3 314 aa2.34□□□□□ -2.03
VPS50-209ENST00000467326 S100ZQ8WXG8 99 aa2.34□□□□□ -2.03
VPS50-209ENST00000467326 UBE2WQ96B02 151 aa2.34□□□□□ -2.03
VPS50-209ENST00000467326 OR4C12Q96R67 309 aa2.34□□□□□ -2.03
VPS50-209ENST00000467326 TXNL4BQ9NX01 149 aaKnown RBP2.34□□□□□ -2.03
VPS50-209ENST00000467326 TAS2R8Q9NYW2 309 aa2.34□□□□□ -2.03
VPS50-209ENST00000467326 RAI1Q7Z5J4 1906 aaPredicted RBP2.34□□□□□ -2.04
VPS50-209ENST00000467326 CACNA1SQ13698 1873 aa2.33□□□□□ -2.04
VPS50-209ENST00000467326 SCN10AQ9Y5Y9 1956 aa2.33□□□□□ -2.04
VPS50-209ENST00000467326 IGHV3-73A0A0B4J1V6 119 aa2.33□□□□□ -2.04
VPS50-209ENST00000467326 IGKV1-9A0A0C4DH69 117 aa2.33□□□□□ -2.04
VPS50-209ENST00000467326 C7orf71A4D174 169 aa2.33□□□□□ -2.04
VPS50-209ENST00000467326 UQCRQO14949 82 aa2.33□□□□□ -2.04
VPS50-209ENST00000467326 LECT2O14960 151 aa2.33□□□□□ -2.04
VPS50-209ENST00000467326 CCL25O15444 150 aa2.33□□□□□ -2.04
VPS50-209ENST00000467326 LY6HO94772 140 aa2.33□□□□□ -2.04
VPS50-209ENST00000467326 BRS3P32247 399 aa2.33□□□□□ -2.04
VPS50-209ENST00000467326 ZNF93P35789 620 aaPredicted RBP2.33□□□□□ -2.04
VPS50-209ENST00000467326 RPS10P46783 165 aaKnown RBP2.33□□□□□ -2.04
VPS50-209ENST00000467326 TPPP2P59282 170 aa2.33□□□□□ -2.04
VPS50-209ENST00000467326 ZNF846Q147U1 533 aa2.33□□□□□ -2.04
VPS50-209ENST00000467326 CCSMST1Q4G0I0 132 aa2.33□□□□□ -2.04
VPS50-209ENST00000467326 TMEM155Q4W5P6 130 aa2.33□□□□□ -2.04
VPS50-209ENST00000467326 IZUMO2Q6UXV1 221 aa2.33□□□□□ -2.04
VPS50-209ENST00000467326 DPPA3Q6W0C5 159 aa2.33□□□□□ -2.04
VPS50-209ENST00000467326 SAXO1Q8IYX7 474 aa2.33□□□□□ -2.04
VPS50-209ENST00000467326 ATOH7Q8N100 152 aa2.33□□□□□ -2.04
VPS50-209ENST00000467326 SIGLECL1Q8N7X8 197 aa2.33□□□□□ -2.04
VPS50-209ENST00000467326 OR10P1Q8NGE3 313 aa2.33□□□□□ -2.04
VPS50-209ENST00000467326 CLDND2Q8NHS1 167 aa2.33□□□□□ -2.04
VPS50-209ENST00000467326 WFDC5Q8TCV5 224 aa2.33□□□□□ -2.04
VPS50-209ENST00000467326 UPK3BQ9BT76 320 aa2.33□□□□□ -2.04
VPS50-209ENST00000467326 SNHG12Q9BXW3 62 aa2.33□□□□□ -2.04
VPS50-209ENST00000467326 SMDT1Q9H4I9 107 aa2.33□□□□□ -2.04
VPS50-209ENST00000467326 DUSP21Q9H596 190 aa2.33□□□□□ -2.04
VPS50-209ENST00000467326 KLK12Q9UKR0 248 aa2.33□□□□□ -2.04
VPS50-209ENST00000467326 BOKQ9UMX3 212 aaPredicted RBP2.33□□□□□ -2.04
VPS50-209ENST00000467326 NOP16Q9Y3C1 178 aaKnown RBP2.33□□□□□ -2.04
VPS50-209ENST00000467326 AP4S1Q9Y587 144 aa2.33□□□□□ -2.04
VPS50-209ENST00000467326 CRB1P82279 1406 aa2.33□□□□□ -2.04
VPS50-209ENST00000467326 CPSF1Q10570 1443 aaKnown RBP2.33□□□□□ -2.04
VPS50-209ENST00000467326 ARHGAP31Q2M1Z3 1444 aa2.33□□□□□ -2.04
VPS50-209ENST00000467326 TNS2Q63HR2 1409 aa2.33□□□□□ -2.04
VPS50-209ENST00000467326 CCDC141Q6ZP82 1450 aa2.33□□□□□ -2.04
VPS50-209ENST00000467326 ARHGAP35Q9NRY4 1499 aa2.33□□□□□ -2.04
VPS50-209ENST00000467326 KDM5CP41229 1560 aa2.32□□□□□ -2.04
VPS50-209ENST00000467326 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.32□□□□□ -2.04
VPS50-209ENST00000467326 A0A0B4J2C4 111 aa2.32□□□□□ -2.04
VPS50-209ENST00000467326 A0A0G2JMM0 328 aa2.32□□□□□ -2.04
VPS50-209ENST00000467326 A0A0J9YW62 118 aa2.32□□□□□ -2.04
VPS50-209ENST00000467326 A0A1W2PPB8 328 aa2.32□□□□□ -2.04
VPS50-209ENST00000467326 KIR3DP1A8MWS1 328 aa2.32□□□□□ -2.04
VPS50-209ENST00000467326 G3V3Q6 166 aa2.32□□□□□ -2.04
VPS50-209ENST00000467326 LHBP01229 141 aa2.32□□□□□ -2.04
VPS50-209ENST00000467326 CD2P06729 351 aa2.32□□□□□ -2.04
VPS50-209ENST00000467326 MSMBP08118 114 aa2.32□□□□□ -2.04
VPS50-209ENST00000467326 LINC00032P0C843 101 aa2.32□□□□□ -2.04
VPS50-209ENST00000467326 RNASE4P34096 147 aaKnown RBP2.32□□□□□ -2.04
VPS50-209ENST00000467326 FOXA3P55318 350 aaPredicted RBP2.32□□□□□ -2.04
VPS50-209ENST00000467326 S100A10P60903 97 aa2.32□□□□□ -2.04
VPS50-209ENST00000467326 BTG2P78543 158 aa2.32□□□□□ -2.04
VPS50-209ENST00000467326 HSD52Q0P140 79 aa2.32□□□□□ -2.04
VPS50-209ENST00000467326 DEFB116Q30KQ4 102 aa2.32□□□□□ -2.04
VPS50-209ENST00000467326 KHDC3LQ587J8 217 aa2.32□□□□□ -2.04
VPS50-209ENST00000467326 MEIG1Q5JSS6 88 aa2.32□□□□□ -2.04
VPS50-209ENST00000467326 ZFP2Q6ZN57 461 aa2.32□□□□□ -2.04
VPS50-209ENST00000467326 SDIM1Q6ZPB5 146 aa2.32□□□□□ -2.04
VPS50-209ENST00000467326 Q6ZR03 302 aa2.32□□□□□ -2.04
VPS50-209ENST00000467326 RPS19BP1Q86WX3 136 aaKnown RBP2.32□□□□□ -2.04
VPS50-209ENST00000467326 SVBPQ8N300 66 aa2.32□□□□□ -2.04
VPS50-209ENST00000467326 MORN4Q8NDC4 146 aa2.32□□□□□ -2.04
VPS50-209ENST00000467326 SMCR5Q8TEV8 140 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms