RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 CLPSP04118 112 aa1.59□□□□□ -2.15
CDC42BPA-211ENST00000466538 HTR1AP08908 422 aa1.59□□□□□ -2.15
CDC42BPA-211ENST00000466538 DEFA4P12838 97 aa1.59□□□□□ -2.15
CDC42BPA-211ENST00000466538 SRP9P49458 86 aaKnown RBP1.59□□□□□ -2.15
CDC42BPA-211ENST00000466538 AQP4P55087 323 aa1.59□□□□□ -2.15
CDC42BPA-211ENST00000466538 TMEM155Q4W5P6 130 aa1.59□□□□□ -2.15
CDC42BPA-211ENST00000466538 MORN2Q502X0 79 aa1.59□□□□□ -2.15
CDC42BPA-211ENST00000466538 C3orf56Q8N813 242 aa1.59□□□□□ -2.15
CDC42BPA-211ENST00000466538 PFN4Q8NHR9 129 aa1.59□□□□□ -2.15
CDC42BPA-211ENST00000466538 CCDC32Q9BV29 185 aa1.59□□□□□ -2.15
CDC42BPA-211ENST00000466538 OR2J1Q9GZK6 312 aa1.59□□□□□ -2.15
CDC42BPA-211ENST00000466538 TMEM138Q9NPI0 162 aa1.59□□□□□ -2.15
CDC42BPA-211ENST00000466538 SPANXA1Q9NS26 97 aa1.59□□□□□ -2.15
CDC42BPA-211ENST00000466538 RNF11Q9Y3C5 154 aa1.59□□□□□ -2.15
CDC42BPA-211ENST00000466538 SORL1Q92673 2214 aa1.59□□□□□ -2.16
CDC42BPA-211ENST00000466538 SBF1O95248 1867 aa1.58□□□□□ -2.16
CDC42BPA-211ENST00000466538 NCAPD3P42695 1498 aa1.58□□□□□ -2.16
CDC42BPA-211ENST00000466538 PHLPP1O60346 1717 aa1.58□□□□□ -2.16
CDC42BPA-211ENST00000466538 TLCD2A6NGC4 264 aa1.58□□□□□ -2.16
CDC42BPA-211ENST00000466538 TMEM256-PLSCR3K7ERE1 68 aa1.58□□□□□ -2.16
CDC42BPA-211ENST00000466538 APOA2P02652 100 aa1.58□□□□□ -2.16
CDC42BPA-211ENST00000466538 METTL15P1P0C7V9 234 aa1.58□□□□□ -2.16
CDC42BPA-211ENST00000466538 TRGC1P0CF51 173 aa1.58□□□□□ -2.16
CDC42BPA-211ENST00000466538 OGNP20774 298 aaKnown RBP1.58□□□□□ -2.16
CDC42BPA-211ENST00000466538 CKS1BP61024 79 aa1.58□□□□□ -2.16
CDC42BPA-211ENST00000466538 ELOBQ15370 118 aa1.58□□□□□ -2.16
CDC42BPA-211ENST00000466538 CCDC58Q4VC31 144 aa1.58□□□□□ -2.16
CDC42BPA-211ENST00000466538 SPANXN3Q5MJ09 141 aa1.58□□□□□ -2.16
CDC42BPA-211ENST00000466538 C7orf65Q6ZTY9 151 aa1.58□□□□□ -2.16
CDC42BPA-211ENST00000466538 DEFB119Q8N690 84 aa1.58□□□□□ -2.16
CDC42BPA-211ENST00000466538 NAA38Q9BRA0 125 aaKnown RBP1.58□□□□□ -2.16
CDC42BPA-211ENST00000466538 TMEM126AQ9H061 195 aa1.58□□□□□ -2.16
CDC42BPA-211ENST00000466538 TPT1P8Q9HAU6 139 aa1.58□□□□□ -2.16
CDC42BPA-211ENST00000466538 MED11Q9P086 117 aa1.58□□□□□ -2.16
CDC42BPA-211ENST00000466538 MED23Q9ULK4 1368 aa1.58□□□□□ -2.16
CDC42BPA-211ENST00000466538 CEP164Q9UPV0 1460 aa1.57□□□□□ -2.16
CDC42BPA-211ENST00000466538 FOCADQ5VW36 1801 aa1.57□□□□□ -2.16
CDC42BPA-211ENST00000466538 CUL9Q8IWT3 2517 aa1.57□□□□□ -2.16
CDC42BPA-211ENST00000466538 A0A1B0GW64 132 aa1.57□□□□□ -2.16
CDC42BPA-211ENST00000466538 ARL5CA6NH57 179 aa1.57□□□□□ -2.16
CDC42BPA-211ENST00000466538 GABARAPH6UMI1 98 aa1.57□□□□□ -2.16
CDC42BPA-211ENST00000466538 K7EP13 123 aa1.57□□□□□ -2.16
CDC42BPA-211ENST00000466538 ZNF705BP0CI00 300 aaPredicted RBP1.57□□□□□ -2.16
CDC42BPA-211ENST00000466538 BCL2P10415 239 aa1.57□□□□□ -2.16
CDC42BPA-211ENST00000466538 CASP1P29466 404 aa1.57□□□□□ -2.16
CDC42BPA-211ENST00000466538 S100A11P31949 105 aa1.57□□□□□ -2.16
CDC42BPA-211ENST00000466538 C1orf140Q5VVS0 124 aa1.57□□□□□ -2.16
CDC42BPA-211ENST00000466538 PHF5AQ7RTV0 110 aaKnown RBP1.57□□□□□ -2.16
CDC42BPA-211ENST00000466538 ZFHX2Q9C0A1 2572 aaPredicted RBP1.57□□□□□ -2.16
CDC42BPA-211ENST00000466538 RIMBP3CA6NJZ7 1639 aa1.57□□□□□ -2.16
CDC42BPA-211ENST00000466538 RIMBP3BA6NNM3 1639 aa1.57□□□□□ -2.16
CDC42BPA-211ENST00000466538 RIMBP3Q9UFD9 1639 aa1.57□□□□□ -2.16
CDC42BPA-211ENST00000466538 KIAA2026Q5HYC2 2103 aa1.57□□□□□ -2.16
CDC42BPA-211ENST00000466538 TRAPPC8Q9Y2L5 1435 aa1.57□□□□□ -2.16
CDC42BPA-211ENST00000466538 ERCC6Q03468 1493 aa1.56□□□□□ -2.16
CDC42BPA-211ENST00000466538 NISCHQ9Y2I1 1504 aa1.56□□□□□ -2.16
CDC42BPA-211ENST00000466538 CR1P17927 2039 aa1.56□□□□□ -2.16
CDC42BPA-211ENST00000466538 BORCS7-ASMTA0A0B4J1R7 106 aa1.56□□□□□ -2.16
CDC42BPA-211ENST00000466538 TMEM189A5PLL7 270 aa1.56□□□□□ -2.16
CDC42BPA-211ENST00000466538 LINC00587B1AMM8 73 aa1.56□□□□□ -2.16
CDC42BPA-211ENST00000466538 CYB5BO43169 146 aa1.56□□□□□ -2.16
CDC42BPA-211ENST00000466538 OR2T1O43869 369 aa1.56□□□□□ -2.16
CDC42BPA-211ENST00000466538 TNFSF15O95150 251 aa1.56□□□□□ -2.16
CDC42BPA-211ENST00000466538 FAM107AO95990 144 aa1.56□□□□□ -2.16
CDC42BPA-211ENST00000466538 PRB1P04280 392 aa1.56□□□□□ -2.16
CDC42BPA-211ENST00000466538 SCTP09683 121 aa1.56□□□□□ -2.16
CDC42BPA-211ENST00000466538 MPC1LP0DKB6 136 aa1.56□□□□□ -2.16
CDC42BPA-211ENST00000466538 NFYBP25208 207 aa1.56□□□□□ -2.16
CDC42BPA-211ENST00000466538 SUPT4H1P63272 117 aaKnown RBP1.56□□□□□ -2.16
CDC42BPA-211ENST00000466538 RTL8BQ17RB0 113 aa1.56□□□□□ -2.16
CDC42BPA-211ENST00000466538 LYRM7Q5U5X0 104 aa1.56□□□□□ -2.16
CDC42BPA-211ENST00000466538 MIR17HGQ75NE6 70 aa1.56□□□□□ -2.16
CDC42BPA-211ENST00000466538 CROCCP2Q86T23 111 aa1.56□□□□□ -2.16
CDC42BPA-211ENST00000466538 TMEM229BQ8NBD8 167 aa1.56□□□□□ -2.16
CDC42BPA-211ENST00000466538 OR4E2Q8NGC2 313 aa1.56□□□□□ -2.16
CDC42BPA-211ENST00000466538 CANT1Q8WVQ1 401 aa1.56□□□□□ -2.16
CDC42BPA-211ENST00000466538 LZICQ8WZA0 190 aa1.56□□□□□ -2.16
CDC42BPA-211ENST00000466538 BORCS8Q96FH0 119 aa1.56□□□□□ -2.16
CDC42BPA-211ENST00000466538 SCGB3A1Q96QR1 104 aa1.56□□□□□ -2.16
CDC42BPA-211ENST00000466538 CGREF1Q99674 301 aa1.56□□□□□ -2.16
CDC42BPA-211ENST00000466538 SLC25A21Q9BQT8 299 aaPredicted RBP1.56□□□□□ -2.16
CDC42BPA-211ENST00000466538 MRPL32Q9BYC8 188 aaKnown RBP1.56□□□□□ -2.16
CDC42BPA-211ENST00000466538 TAF9BQ9HBM6 251 aa1.56□□□□□ -2.16
CDC42BPA-211ENST00000466538 TRAPPC2LQ9UL33 140 aa1.56□□□□□ -2.16
CDC42BPA-211ENST00000466538 OVOS2A0A0G2JMS6 1433 aa1.56□□□□□ -2.16
CDC42BPA-211ENST00000466538 SOGA1O94964 1423 aa1.56□□□□□ -2.16
CDC42BPA-211ENST00000466538 FN1P02751 2386 aaKnown RBP1.55□□□□□ -2.16
CDC42BPA-211ENST00000466538 A0A087X0T9 212 aa1.55□□□□□ -2.16
CDC42BPA-211ENST00000466538 A0A096LPI6 279 aa1.55□□□□□ -2.16
CDC42BPA-211ENST00000466538 TRBV7-6A0A0J9YX20 115 aa1.55□□□□□ -2.16
CDC42BPA-211ENST00000466538 ODAMA1E959 279 aa1.55□□□□□ -2.16
CDC42BPA-211ENST00000466538 C1orf196B1AJZ1 125 aa1.55□□□□□ -2.16
CDC42BPA-211ENST00000466538 SDCBPO00560 298 aaPredicted RBP1.55□□□□□ -2.16
CDC42BPA-211ENST00000466538 SHBGP04278 402 aa1.55□□□□□ -2.16
CDC42BPA-211ENST00000466538 SDC4P31431 198 aa1.55□□□□□ -2.16
CDC42BPA-211ENST00000466538 YPEL3P61236 119 aaPredicted RBP1.55□□□□□ -2.16
CDC42BPA-211ENST00000466538 PLCXD2Q0VAA5 305 aa1.55□□□□□ -2.16
CDC42BPA-211ENST00000466538 EIF3IQ13347 325 aaKnown RBP1.55□□□□□ -2.16
CDC42BPA-211ENST00000466538 PATE2Q6UY27 113 aa1.55□□□□□ -2.16
CDC42BPA-211ENST00000466538 RPS19BP1Q86WX3 136 aaKnown RBP1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms