RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 FN1P02751 2386 aaKnown RBP1.78□□□□□ -2.12
HMGN3P1-201ENST00000453847 NCAPD3P42695 1498 aa1.78□□□□□ -2.12
HMGN3P1-201ENST00000453847 ARAP1Q96P48 1450 aa1.78□□□□□ -2.12
HMGN3P1-201ENST00000453847 TRGV10A0A0A0MS01 117 aa1.78□□□□□ -2.12
HMGN3P1-201ENST00000453847 MIFP14174 115 aa1.78□□□□□ -2.12
HMGN3P1-201ENST00000453847 SSR2P43308 183 aa1.78□□□□□ -2.12
HMGN3P1-201ENST00000453847 ALX1Q15699 326 aa1.78□□□□□ -2.12
HMGN3P1-201ENST00000453847 ESRGQ1W209 222 aa1.78□□□□□ -2.12
HMGN3P1-201ENST00000453847 RNASE10Q5GAN6 216 aaKnown RBP1.78□□□□□ -2.12
HMGN3P1-201ENST00000453847 C1orf140Q5VVS0 124 aa1.78□□□□□ -2.12
HMGN3P1-201ENST00000453847 HRCT1Q6UXD1 115 aa1.78□□□□□ -2.12
HMGN3P1-201ENST00000453847 TOMM20LQ6UXN7 152 aa1.78□□□□□ -2.12
HMGN3P1-201ENST00000453847 OR4D11Q8NGI4 311 aa1.78□□□□□ -2.12
HMGN3P1-201ENST00000453847 OR2T10Q8NGZ9 312 aa1.78□□□□□ -2.12
HMGN3P1-201ENST00000453847 YPEL2Q96QA6 119 aa1.78□□□□□ -2.12
HMGN3P1-201ENST00000453847 C19orf12Q9NSK7 152 aa1.78□□□□□ -2.12
HMGN3P1-201ENST00000453847 PIK3C2AO00443 1686 aa1.77□□□□□ -2.13
HMGN3P1-201ENST00000453847 TSTD3H0UI37 97 aa1.77□□□□□ -2.13
HMGN3P1-201ENST00000453847 TIMM17BO60830 172 aa1.77□□□□□ -2.13
HMGN3P1-201ENST00000453847 GADD45GO95257 159 aa1.77□□□□□ -2.13
HMGN3P1-201ENST00000453847 UBBP0CG47 229 aa1.77□□□□□ -2.13
HMGN3P1-201ENST00000453847 MGST1P10620 155 aaKnown RBP1.77□□□□□ -2.13
HMGN3P1-201ENST00000453847 RPS3P23396 243 aaKnown RBP eCLIP1.77□□□□□ -2.13
HMGN3P1-201ENST00000453847 POLR2HP52434 150 aaKnown RBP1.77□□□□□ -2.13
HMGN3P1-201ENST00000453847 RTL8BQ17RB0 113 aa1.77□□□□□ -2.13
HMGN3P1-201ENST00000453847 CCDC115Q96NT0 180 aa1.77□□□□□ -2.13
HMGN3P1-201ENST00000453847 NPCDR1Q9BY65 106 aa1.77□□□□□ -2.13
HMGN3P1-201ENST00000453847 POPDC3Q9HBV1 291 aa1.77□□□□□ -2.13
HMGN3P1-201ENST00000453847 C8orf4Q9NR00 106 aa1.77□□□□□ -2.13
HMGN3P1-201ENST00000453847 GINS2Q9Y248 185 aa1.77□□□□□ -2.13
HMGN3P1-201ENST00000453847 NUP210Q8TEM1 1887 aaPredicted RBP1.77□□□□□ -2.13
HMGN3P1-201ENST00000453847 BAHCC1Q9P281 2608 aa1.77□□□□□ -2.13
HMGN3P1-201ENST00000453847 XIRP1Q702N8 1843 aaKnown RBP1.77□□□□□ -2.13
HMGN3P1-201ENST00000453847 TAF1LQ8IZX4 1826 aa1.77□□□□□ -2.13
HMGN3P1-201ENST00000453847 IFNA14P01570 189 aa1.76□□□□□ -2.13
HMGN3P1-201ENST00000453847 S100GP29377 79 aa1.76□□□□□ -2.13
HMGN3P1-201ENST00000453847 TMBIM6P55061 237 aa1.76□□□□□ -2.13
HMGN3P1-201ENST00000453847 KRTAP12-1P59990 96 aa1.76□□□□□ -2.13
HMGN3P1-201ENST00000453847 DEFB113Q30KQ7 82 aa1.76□□□□□ -2.13
HMGN3P1-201ENST00000453847 SAMD13Q5VXD3 122 aa1.76□□□□□ -2.13
HMGN3P1-201ENST00000453847 MBD3L1Q8WWY6 194 aa1.76□□□□□ -2.13
HMGN3P1-201ENST00000453847 BORCS8Q96FH0 119 aa1.76□□□□□ -2.13
HMGN3P1-201ENST00000453847 CST9LQ9H4G1 147 aa1.76□□□□□ -2.13
HMGN3P1-201ENST00000453847 NUBP2Q9Y5Y2 271 aa1.76□□□□□ -2.13
HMGN3P1-201ENST00000453847 MYO5AQ9Y4I1 1855 aaKnown RBP1.75□□□□□ -2.13
HMGN3P1-201ENST00000453847 RGS12O14924 1447 aa1.75□□□□□ -2.13
HMGN3P1-201ENST00000453847 C2orf70A6NJV1 201 aa1.75□□□□□ -2.13
HMGN3P1-201ENST00000453847 E7EQ34 232 aa1.75□□□□□ -2.13
HMGN3P1-201ENST00000453847 GABARAPH6UMI1 98 aa1.75□□□□□ -2.13
HMGN3P1-201ENST00000453847 HLA-EP13747 358 aa1.75□□□□□ -2.13
HMGN3P1-201ENST00000453847 ROMO1P60602 79 aa1.75□□□□□ -2.13
HMGN3P1-201ENST00000453847 PLCXD2Q0VAA5 305 aa1.75□□□□□ -2.13
HMGN3P1-201ENST00000453847 ELOBQ15370 118 aa1.75□□□□□ -2.13
HMGN3P1-201ENST00000453847 SPANXN5Q5MJ07 72 aa1.75□□□□□ -2.13
HMGN3P1-201ENST00000453847 PPTC7Q8NI37 304 aa1.75□□□□□ -2.13
HMGN3P1-201ENST00000453847 PYDC1Q8WXC3 89 aa1.75□□□□□ -2.13
HMGN3P1-201ENST00000453847 ZNF625Q96I27 306 aaPredicted RBP1.75□□□□□ -2.13
HMGN3P1-201ENST00000453847 SLC25A21Q9BQT8 299 aaPredicted RBP1.75□□□□□ -2.13
HMGN3P1-201ENST00000453847 CCDC32Q9BV29 185 aa1.75□□□□□ -2.13
HMGN3P1-201ENST00000453847 TAF9BQ9HBM6 251 aa1.75□□□□□ -2.13
HMGN3P1-201ENST00000453847 MED31Q9Y3C7 131 aa1.75□□□□□ -2.13
HMGN3P1-201ENST00000453847 ANAPC1Q9H1A4 1944 aa1.75□□□□□ -2.13
HMGN3P1-201ENST00000453847 ARHGEF11O15085 1522 aa1.75□□□□□ -2.13
HMGN3P1-201ENST00000453847 NISCHQ9Y2I1 1504 aa1.75□□□□□ -2.13
HMGN3P1-201ENST00000453847 BRWD1Q9NSI6 2320 aa1.74□□□□□ -2.13
HMGN3P1-201ENST00000453847 FUOMA2VDF0 154 aa1.74□□□□□ -2.13
HMGN3P1-201ENST00000453847 LYZL6O75951 148 aa1.74□□□□□ -2.13
HMGN3P1-201ENST00000453847 IGLV1-51P01701 117 aa1.74□□□□□ -2.13
HMGN3P1-201ENST00000453847 S100A11P31949 105 aa1.74□□□□□ -2.13
HMGN3P1-201ENST00000453847 FP248Q71RG6 208 aaPredicted RBP1.74□□□□□ -2.13
HMGN3P1-201ENST00000453847 PHF5AQ7RTV0 110 aaKnown RBP1.74□□□□□ -2.13
HMGN3P1-201ENST00000453847 COA5Q86WW8 74 aa1.74□□□□□ -2.13
HMGN3P1-201ENST00000453847 ANGPTL5Q86XS5 388 aa1.74□□□□□ -2.13
HMGN3P1-201ENST00000453847 Q96M85 177 aa1.74□□□□□ -2.13
HMGN3P1-201ENST00000453847 ADAT1Q9BUB4 502 aaKnown RBP1.74□□□□□ -2.13
HMGN3P1-201ENST00000453847 NHP2Q9NX24 153 aaKnown RBP1.74□□□□□ -2.13
HMGN3P1-201ENST00000453847 HS3ST2Q9Y278 367 aa1.74□□□□□ -2.13
HMGN3P1-201ENST00000453847 TRAPPC8Q9Y2L5 1435 aa1.74□□□□□ -2.13
HMGN3P1-201ENST00000453847 A0A087WX48 190 aa1.73□□□□□ -2.13
HMGN3P1-201ENST00000453847 BAALC-AS2P0C853 105 aa1.73□□□□□ -2.13
HMGN3P1-201ENST00000453847 LINC00311Q8N616 119 aa1.73□□□□□ -2.13
HMGN3P1-201ENST00000453847 LINC00301Q8NCQ3 95 aa1.73□□□□□ -2.13
HMGN3P1-201ENST00000453847 RETNLBQ9BQ08 111 aa1.73□□□□□ -2.13
HMGN3P1-201ENST00000453847 OR2H1Q9GZK4 316 aa1.73□□□□□ -2.13
HMGN3P1-201ENST00000453847 HIVEP2P31629 2446 aa1.73□□□□□ -2.13
HMGN3P1-201ENST00000453847 DOCK10Q96BY6 2186 aa1.73□□□□□ -2.13
HMGN3P1-201ENST00000453847 PCNX2A6NKB5 2137 aa1.73□□□□□ -2.13
HMGN3P1-201ENST00000453847 BCL9O00512 1426 aa1.73□□□□□ -2.13
HMGN3P1-201ENST00000453847 BAZ2BQ9UIF8 2168 aaKnown RBP1.72□□□□□ -2.13
HMGN3P1-201ENST00000453847 IGKV2D-26A0A0A0MRZ7 120 aa1.72□□□□□ -2.13
HMGN3P1-201ENST00000453847 OR1I1O60431 355 aa1.72□□□□□ -2.13
HMGN3P1-201ENST00000453847 UBL3O95164 117 aa1.72□□□□□ -2.13
HMGN3P1-201ENST00000453847 CRPP02741 224 aa1.72□□□□□ -2.13
HMGN3P1-201ENST00000453847 ZNF705BP0CI00 300 aaPredicted RBP1.72□□□□□ -2.13
HMGN3P1-201ENST00000453847 BCL2P10415 239 aa1.72□□□□□ -2.13
HMGN3P1-201ENST00000453847 RNASE3P12724 160 aaKnown RBP1.72□□□□□ -2.13
HMGN3P1-201ENST00000453847 AKR1C3P42330 323 aa1.72□□□□□ -2.13
HMGN3P1-201ENST00000453847 HBBP68871 147 aa1.72□□□□□ -2.13
HMGN3P1-201ENST00000453847 PDE6HQ13956 83 aa1.72□□□□□ -2.13
HMGN3P1-201ENST00000453847 C6orf62Q9GZU0 229 aaPredicted RBP1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms