RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 IGKV1-5P01602 117 aa8.32□□□□□ -1.08
SCN10A-201ENST00000449082 EVI2AP22794 236 aa8.32□□□□□ -1.08
SCN10A-201ENST00000449082 UBE2E1P51965 193 aa8.32□□□□□ -1.08
SCN10A-201ENST00000449082 GFI1BQ5VTD9 330 aa8.32□□□□□ -1.08
SCN10A-201ENST00000449082 PGPEP1Q9NXJ5 209 aa8.32□□□□□ -1.08
SCN10A-201ENST00000449082 DPM2O94777 84 aa8.32□□□□□ -1.08
SCN10A-201ENST00000449082 TOMM40O96008 361 aa8.32□□□□□ -1.08
SCN10A-201ENST00000449082 EXOC3-AS1Q8N2X6 119 aa8.32□□□□□ -1.08
SCN10A-201ENST00000449082 TMEM170AQ8WVE7 144 aa8.32□□□□□ -1.08
SCN10A-201ENST00000449082 GNB1LQ9BYB4 327 aa8.32□□□□□ -1.08
SCN10A-201ENST00000449082 LY6G6EA0A0G2JKS1 128 aa8.32□□□□□ -1.08
SCN10A-201ENST00000449082 APOMO95445 188 aa8.32□□□□□ -1.08
SCN10A-201ENST00000449082 U3KQA8 63 aa8.32□□□□□ -1.08
SCN10A-201ENST00000449082 TRGV1A0A0A0MS02 117 aa8.32□□□□□ -1.08
SCN10A-201ENST00000449082 SRRM4A7MD48 611 aaKnown RBP8.32□□□□□ -1.08
SCN10A-201ENST00000449082 LINC00473A8K010 186 aa8.32□□□□□ -1.08
SCN10A-201ENST00000449082 SNAI2O43623 268 aa8.32□□□□□ -1.08
SCN10A-201ENST00000449082 INSP01308 110 aa8.32□□□□□ -1.08
SCN10A-201ENST00000449082 NBL1P41271 181 aa8.32□□□□□ -1.08
SCN10A-201ENST00000449082 CTAG1AP78358 180 aa8.32□□□□□ -1.08
SCN10A-201ENST00000449082 RPL36AP83881 106 aaKnown RBP8.32□□□□□ -1.08
SCN10A-201ENST00000449082 NMSQ5H8A3 153 aa8.32□□□□□ -1.08
SCN10A-201ENST00000449082 Q6ZS49 121 aa8.32□□□□□ -1.08
SCN10A-201ENST00000449082 RPL36ALQ969Q0 106 aaKnown RBP8.32□□□□□ -1.08
SCN10A-201ENST00000449082 Q96MF0 132 aa8.32□□□□□ -1.08
SCN10A-201ENST00000449082 CHTOPQ9Y3Y2 248 aaKnown RBP8.32□□□□□ -1.08
SCN10A-201ENST00000449082 FCN3O75636 299 aa8.31□□□□□ -1.08
SCN10A-201ENST00000449082 BEND2Q8NDZ0 799 aa8.31□□□□□ -1.08
SCN10A-201ENST00000449082 EP300Q09472 2414 aaPredicted RBP8.31□□□□□ -1.08
SCN10A-201ENST00000449082 SERF1AO75920 110 aa8.31□□□□□ -1.08
SCN10A-201ENST00000449082 TICRRQ7Z2Z1 1910 aa8.31□□□□□ -1.08
SCN10A-201ENST00000449082 TTC32Q5I0X7 151 aa8.31□□□□□ -1.08
SCN10A-201ENST00000449082 PRDM13Q9H4Q3 707 aa8.31□□□□□ -1.08
SCN10A-201ENST00000449082 TRAV12-3A0A0B4J271 114 aa8.31□□□□□ -1.08
SCN10A-201ENST00000449082 SPATA31B1PQ5VZV4 182 aa8.31□□□□□ -1.08
SCN10A-201ENST00000449082 TMEM14EPQ6UXP3 125 aa8.31□□□□□ -1.08
SCN10A-201ENST00000449082 RHPN1-AS1Q9BWJ2 59 aa8.31□□□□□ -1.08
SCN10A-201ENST00000449082 NRN1Q9NPD7 142 aa8.31□□□□□ -1.08
SCN10A-201ENST00000449082 ITGB1BP1O14713 200 aa8.31□□□□□ -1.08
SCN10A-201ENST00000449082 SUPT4H1P63272 117 aaKnown RBP8.31□□□□□ -1.08
SCN10A-201ENST00000449082 CHCHD1Q96BP2 118 aaKnown RBP8.3□□□□□ -1.08
SCN10A-201ENST00000449082 DPH3P1Q9H4G8 78 aa8.3□□□□□ -1.08
SCN10A-201ENST00000449082 FGF16O43320 207 aa8.3□□□□□ -1.08
SCN10A-201ENST00000449082 LYPD1Q8N2G4 141 aa8.3□□□□□ -1.08
SCN10A-201ENST00000449082 DAZ1Q9NQZ3 744 aaKnown RBP8.3□□□□□ -1.08
SCN10A-201ENST00000449082 RLFQ13129 1914 aa8.3□□□□□ -1.08
SCN10A-201ENST00000449082 PGPEP1LA6NFU8 196 aa8.3□□□□□ -1.08
SCN10A-201ENST00000449082 TCRAP04437 139 aa8.3□□□□□ -1.08
SCN10A-201ENST00000449082 RUSC1-AS1Q66K80 236 aa8.3□□□□□ -1.08
SCN10A-201ENST00000449082 LCN12Q6JVE5 192 aa8.3□□□□□ -1.08
SCN10A-201ENST00000449082 TMEM86BQ8N661 226 aa8.3□□□□□ -1.08
SCN10A-201ENST00000449082 Q8TCH9 128 aa8.3□□□□□ -1.08
SCN10A-201ENST00000449082 ST6GALNAC6Q969X2 333 aa8.3□□□□□ -1.08
SCN10A-201ENST00000449082 CEACAM8P31997 349 aaPredicted RBP8.3□□□□□ -1.08
SCN10A-201ENST00000449082 FXYD7P58549 80 aa8.3□□□□□ -1.08
SCN10A-201ENST00000449082 QRFPP83859 136 aa8.3□□□□□ -1.08
SCN10A-201ENST00000449082 ASCL4Q6XD76 172 aa8.3□□□□□ -1.08
SCN10A-201ENST00000449082 TCF20Q9UGU0 1960 aaKnown RBP8.3□□□□□ -1.08
SCN10A-201ENST00000449082 IGHV1-69DA0A0B4J2H0 117 aa8.3□□□□□ -1.08
SCN10A-201ENST00000449082 TSPAN13O95857 204 aa8.3□□□□□ -1.08
SCN10A-201ENST00000449082 IGHV1-69P01742 117 aa8.3□□□□□ -1.08
SCN10A-201ENST00000449082 LAGE3Q14657 143 aa8.29□□□□□ -1.08
SCN10A-201ENST00000449082 GVINP1Q7Z2Y8 2422 aa8.29□□□□□ -1.08
SCN10A-201ENST00000449082 CACNA1DQ01668 2161 aa8.29□□□□□ -1.08
SCN10A-201ENST00000449082 LINC00469Q8N7U9 141 aa8.29□□□□□ -1.08
SCN10A-201ENST00000449082 CKS1BP61024 79 aa8.29□□□□□ -1.08
SCN10A-201ENST00000449082 CEP250Q9BV73 2442 aa8.29□□□□□ -1.08
SCN10A-201ENST00000449082 GBF1Q92538 1859 aa8.29□□□□□ -1.08
SCN10A-201ENST00000449082 C1QL4Q86Z23 238 aa8.29□□□□□ -1.08
SCN10A-201ENST00000449082 RFNGQ9Y644 331 aa8.29□□□□□ -1.08
SCN10A-201ENST00000449082 IGHV3-73A0A0B4J1V6 119 aa8.29□□□□□ -1.08
SCN10A-201ENST00000449082 PSG3Q16557 428 aa8.29□□□□□ -1.08
SCN10A-201ENST00000449082 ZNF876PQ49A33 203 aa8.29□□□□□ -1.08
SCN10A-201ENST00000449082 RPRMLQ8N4K4 120 aa8.29□□□□□ -1.08
SCN10A-201ENST00000449082 TRAV1-1A0A0B4J248 108 aa8.29□□□□□ -1.08
SCN10A-201ENST00000449082 J3QLI3 93 aa8.29□□□□□ -1.08
SCN10A-201ENST00000449082 TNFSF13O75888 250 aa8.29□□□□□ -1.08
SCN10A-201ENST00000449082 IGKCP01834 107 aa8.29□□□□□ -1.08
SCN10A-201ENST00000449082 PLNP26678 52 aa8.29□□□□□ -1.08
SCN10A-201ENST00000449082 GATA4P43694 442 aa8.29□□□□□ -1.08
SCN10A-201ENST00000449082 SYNJ2BPP57105 145 aa8.29□□□□□ -1.08
SCN10A-201ENST00000449082 LINC01559Q495D7 138 aa8.29□□□□□ -1.08
SCN10A-201ENST00000449082 UBE2E2Q96LR5 201 aa8.29□□□□□ -1.08
SCN10A-201ENST00000449082 AGMATQ9BSE5 352 aa8.29□□□□□ -1.08
SCN10A-201ENST00000449082 IGHV2-70DA0A0C4DH43 119 aa8.28□□□□□ -1.08
SCN10A-201ENST00000449082 FNDC10F2Z333 226 aa8.28□□□□□ -1.08
SCN10A-201ENST00000449082 CA1P00915 261 aaPredicted RBP8.28□□□□□ -1.08
SCN10A-201ENST00000449082 GZMBP10144 247 aa8.28□□□□□ -1.08
SCN10A-201ENST00000449082 MORN3Q6PF18 240 aaPredicted RBP8.28□□□□□ -1.08
SCN10A-201ENST00000449082 ZNF562Q6V9R5 426 aa8.28□□□□□ -1.08
SCN10A-201ENST00000449082 RNASE2P10153 161 aaKnown RBP8.28□□□□□ -1.08
SCN10A-201ENST00000449082 PRB4P10163 310 aaPredicted RBP8.28□□□□□ -1.08
SCN10A-201ENST00000449082 RNF144BQ7Z419 303 aa8.28□□□□□ -1.08
SCN10A-201ENST00000449082 NIT1Q86X76 327 aa8.28□□□□□ -1.08
SCN10A-201ENST00000449082 LINC00518Q8N0U6 118 aa8.28□□□□□ -1.08
SCN10A-201ENST00000449082 NTF4P34130 210 aa8.28□□□□□ -1.08
SCN10A-201ENST00000449082 SRSF3P84103 164 aaKnown RBP8.28□□□□□ -1.08
SCN10A-201ENST00000449082 OVOL3O00110 214 aa8.28□□□□□ -1.08
SCN10A-201ENST00000449082 ETV2O00321 342 aaPredicted RBP8.28□□□□□ -1.08
SCN10A-201ENST00000449082 PSCAO43653 123 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms