RNA–Protein interactions for RNA: ENST00000445357.1

NCLP1-201, Transcript of nucleolin pseudogene 1, humanhuman

BASIC

Gene NCLP1, Length 1,963 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP1-201ENST00000445357 LEMD1Q68G75 181 aa11.17□□□□□ -0.62
NCLP1-201ENST00000445357 RASL11AQ6T310 242 aa11.17□□□□□ -0.62
NCLP1-201ENST00000445357 ZNF562Q6V9R5 426 aa11.17□□□□□ -0.62
NCLP1-201ENST00000445357 NUDT10Q8NFP7 164 aa11.17□□□□□ -0.62
NCLP1-201ENST00000445357 WIPF2Q8TF74 440 aaPredicted RBP11.17□□□□□ -0.62
NCLP1-201ENST00000445357 NUDT11Q96G61 164 aa11.17□□□□□ -0.62
NCLP1-201ENST00000445357 FMC1Q96HJ9 113 aa11.17□□□□□ -0.62
NCLP1-201ENST00000445357 ZNF48Q96MX3 618 aaPredicted RBP11.17□□□□□ -0.62
NCLP1-201ENST00000445357 GPR82Q96P67 336 aa11.17□□□□□ -0.62
NCLP1-201ENST00000445357 RBM14Q96PK6 669 aaKnown RBP11.17□□□□□ -0.62
NCLP1-201ENST00000445357 MLST8Q9BVC4 326 aa11.17□□□□□ -0.62
NCLP1-201ENST00000445357 IGLV11-55A0A075B6I3 123 aa11.16□□□□□ -0.62
NCLP1-201ENST00000445357 A0A1W2PRD5 423 aa11.16□□□□□ -0.62
NCLP1-201ENST00000445357 A0A1W2PRF3 423 aa11.16□□□□□ -0.62
NCLP1-201ENST00000445357 A0A1W2PRM7 423 aa11.16□□□□□ -0.62
NCLP1-201ENST00000445357 NDUFS7O75251 213 aa11.16□□□□□ -0.62
NCLP1-201ENST00000445357 HLA-DQA1P01909 254 aa11.16□□□□□ -0.62
NCLP1-201ENST00000445357 TCRAP04437 139 aa11.16□□□□□ -0.62
NCLP1-201ENST00000445357 LINC00310P59036 64 aa11.16□□□□□ -0.62
NCLP1-201ENST00000445357 ASPHD1Q5U4P2 390 aa11.16□□□□□ -0.62
NCLP1-201ENST00000445357 CMTM2Q8TAZ6 248 aa11.16□□□□□ -0.62
NCLP1-201ENST00000445357 IGFBPL1Q8WX77 278 aa11.16□□□□□ -0.62
NCLP1-201ENST00000445357 FAM168AQ92567 244 aa11.16□□□□□ -0.62
NCLP1-201ENST00000445357 TMEM68Q96MH6 324 aa11.16□□□□□ -0.62
NCLP1-201ENST00000445357 SHANK2-AS3Q9BTD1 123 aa11.16□□□□□ -0.62
NCLP1-201ENST00000445357 FAM103A1Q9BTL3 118 aaKnown RBP11.16□□□□□ -0.62
NCLP1-201ENST00000445357 NAT8BQ9UHF3 227 aa11.16□□□□□ -0.62
NCLP1-201ENST00000445357 TRAV20A0A0B4J274 112 aa11.16□□□□□ -0.62
NCLP1-201ENST00000445357 H3BRN7 92 aa11.16□□□□□ -0.62
NCLP1-201ENST00000445357 LTAP01374 205 aa11.16□□□□□ -0.62
NCLP1-201ENST00000445357 PAX1P15863 534 aa11.16□□□□□ -0.62
NCLP1-201ENST00000445357 ZNF843Q8N446 348 aa11.16□□□□□ -0.62
NCLP1-201ENST00000445357 ARPC1AQ92747 370 aa11.16□□□□□ -0.62
NCLP1-201ENST00000445357 UBTD1Q9HAC8 227 aa11.16□□□□□ -0.62
NCLP1-201ENST00000445357 ZNF586Q9NXT0 402 aa11.16□□□□□ -0.62
NCLP1-201ENST00000445357 TBL2Q9Y4P3 447 aaKnown RBP11.16□□□□□ -0.62
NCLP1-201ENST00000445357 TRAV30A0A087WSZ9 112 aa11.15□□□□□ -0.62
NCLP1-201ENST00000445357 IGHV2-70DA0A0C4DH43 119 aa11.15□□□□□ -0.62
NCLP1-201ENST00000445357 CA1P00915 261 aaPredicted RBP11.15□□□□□ -0.62
NCLP1-201ENST00000445357 PAFAH1B2P68402 229 aa11.15□□□□□ -0.62
NCLP1-201ENST00000445357 C9orf152Q5JTZ5 239 aa11.15□□□□□ -0.62
NCLP1-201ENST00000445357 TTC9CQ8N5M4 171 aa11.15□□□□□ -0.62
NCLP1-201ENST00000445357 FANCD2OSQ96PS1 177 aa11.15□□□□□ -0.62
NCLP1-201ENST00000445357 ZNF492Q9P255 531 aa11.15□□□□□ -0.62
NCLP1-201ENST00000445357 ZNF462Q96JM2 2506 aa11.15□□□□□ -0.62
NCLP1-201ENST00000445357 WI2-2373I1.2A0A1W2PRP0 233 aa11.14□□□□□ -0.63
NCLP1-201ENST00000445357 TSTD3H0UI37 97 aa11.14□□□□□ -0.63
NCLP1-201ENST00000445357 SPINK4O60575 86 aa11.14□□□□□ -0.63
NCLP1-201ENST00000445357 RAB4BP61018 213 aa11.14□□□□□ -0.63
NCLP1-201ENST00000445357 NDPQ00604 133 aa11.14□□□□□ -0.63
NCLP1-201ENST00000445357 USF2Q15853 346 aaPredicted RBP11.14□□□□□ -0.63
NCLP1-201ENST00000445357 MRPL54Q6P161 138 aaKnown RBP11.14□□□□□ -0.63
NCLP1-201ENST00000445357 ZNF491Q8N8L2 437 aa11.14□□□□□ -0.63
NCLP1-201ENST00000445357 TSKUQ8WUA8 353 aa11.14□□□□□ -0.63
NCLP1-201ENST00000445357 RNF125Q96EQ8 232 aa11.14□□□□□ -0.63
NCLP1-201ENST00000445357 RNF24Q9Y225 148 aa11.14□□□□□ -0.63
NCLP1-201ENST00000445357 RELNP78509 3460 aa11.14□□□□□ -0.63
NCLP1-201ENST00000445357 SERF1AO75920 110 aa11.14□□□□□ -0.63
NCLP1-201ENST00000445357 SLC35B1P78383 322 aa11.14□□□□□ -0.63
NCLP1-201ENST00000445357 IQCJQ1A5X6 159 aa11.14□□□□□ -0.63
NCLP1-201ENST00000445357 OR10J3Q5JRS4 329 aa11.14□□□□□ -0.63
NCLP1-201ENST00000445357 DCHS2Q6V1P9 2916 aa11.14□□□□□ -0.63
NCLP1-201ENST00000445357 TRBV6-1A0A0K0K1D8 114 aa11.13□□□□□ -0.63
NCLP1-201ENST00000445357 H3BTX0 84 aa11.13□□□□□ -0.63
NCLP1-201ENST00000445357 TPPP2P59282 170 aa11.13□□□□□ -0.63
NCLP1-201ENST00000445357 CT83Q5H943 113 aa11.13□□□□□ -0.63
NCLP1-201ENST00000445357 KLF17Q5JT82 389 aaPredicted RBP11.13□□□□□ -0.63
NCLP1-201ENST00000445357 PRR27Q6MZM9 219 aa11.13□□□□□ -0.63
NCLP1-201ENST00000445357 BPIFA4PQ86YQ2 179 aa11.13□□□□□ -0.63
NCLP1-201ENST00000445357 NUP35Q8NFH5 326 aa11.13□□□□□ -0.63
NCLP1-201ENST00000445357 PRSS22Q9GZN4 317 aa11.13□□□□□ -0.63
NCLP1-201ENST00000445357 ZNF331Q9NQX6 463 aaPredicted RBP11.13□□□□□ -0.63
NCLP1-201ENST00000445357 RPH3ALQ9UNE2 315 aa11.13□□□□□ -0.63
NCLP1-201ENST00000445357 WNK2Q9Y3S1 2297 aa11.13□□□□□ -0.63
NCLP1-201ENST00000445357 LRBAP50851 2863 aa11.13□□□□□ -0.63
NCLP1-201ENST00000445357 BMPR1BO00238 502 aa11.12□□□□□ -0.63
NCLP1-201ENST00000445357 IGLC2P0DOY2 106 aa11.12□□□□□ -0.63
NCLP1-201ENST00000445357 TMEM11P17152 192 aa11.12□□□□□ -0.63
NCLP1-201ENST00000445357 UQCRFS1P47985 274 aa11.12□□□□□ -0.63
NCLP1-201ENST00000445357 UBE2E1P51965 193 aa11.12□□□□□ -0.63
NCLP1-201ENST00000445357 MFAP4P55083 255 aa11.12□□□□□ -0.63
NCLP1-201ENST00000445357 Q86TA4 180 aa11.12□□□□□ -0.63
NCLP1-201ENST00000445357 BAGE3Q86Y29 109 aa11.12□□□□□ -0.63
NCLP1-201ENST00000445357 MS4A10Q96PG2 267 aa11.12□□□□□ -0.63
NCLP1-201ENST00000445357 TBX15Q96SF7 602 aa11.12□□□□□ -0.63
NCLP1-201ENST00000445357 GNB4Q9HAV0 340 aa11.12□□□□□ -0.63
NCLP1-201ENST00000445357 TRBV19A0A075B6N1 114 aa11.12□□□□□ -0.63
NCLP1-201ENST00000445357 C19orf71A6NCJ1 209 aa11.12□□□□□ -0.63
NCLP1-201ENST00000445357 NCBP2LA6PVI3 153 aaKnown RBP11.12□□□□□ -0.63
NCLP1-201ENST00000445357 F8W735 103 aaPredicted RBP11.12□□□□□ -0.63
NCLP1-201ENST00000445357 C19orf84I3L1E1 186 aa11.12□□□□□ -0.63
NCLP1-201ENST00000445357 MRPS12O15235 138 aaKnown RBP11.12□□□□□ -0.63
NCLP1-201ENST00000445357 LMO4P61968 165 aa11.12□□□□□ -0.63
NCLP1-201ENST00000445357 ATP5L2Q7Z4Y8 100 aa11.12□□□□□ -0.63
NCLP1-201ENST00000445357 S100A7AQ86SG5 101 aa11.12□□□□□ -0.63
NCLP1-201ENST00000445357 LYPD1Q8N2G4 141 aa11.12□□□□□ -0.63
NCLP1-201ENST00000445357 NEU1Q99519 415 aa11.12□□□□□ -0.63
NCLP1-201ENST00000445357 GCN1Q92616 2671 aaKnown RBP11.11□□□□□ -0.63
NCLP1-201ENST00000445357 F2Z2F3 143 aa11.11□□□□□ -0.63
NCLP1-201ENST00000445357 GNG7O60262 68 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms