RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 FANCD2OSQ96PS1 177 aa13.19□□□□□ -0.3
LIMK1-203ENST00000435201 TBX15Q96SF7 602 aa13.19□□□□□ -0.3
LIMK1-203ENST00000435201 THYN1Q9P016 225 aa13.19□□□□□ -0.3
LIMK1-203ENST00000435201 IZUMO1RA6ND01 250 aa13.19□□□□□ -0.3
LIMK1-203ENST00000435201 H3BRN7 92 aa13.19□□□□□ -0.3
LIMK1-203ENST00000435201 GNG7O60262 68 aa13.19□□□□□ -0.3
LIMK1-203ENST00000435201 TCRAP04437 139 aa13.19□□□□□ -0.3
LIMK1-203ENST00000435201 MFAP4P55083 255 aa13.19□□□□□ -0.3
LIMK1-203ENST00000435201 MBD6Q96DN6 1003 aa13.19□□□□□ -0.3
LIMK1-203ENST00000435201 RNF125Q96EQ8 232 aa13.19□□□□□ -0.3
LIMK1-203ENST00000435201 LPAR2Q9HBW0 351 aa13.19□□□□□ -0.3
LIMK1-203ENST00000435201 LINC00587B1AMM8 73 aa13.18□□□□□ -0.3
LIMK1-203ENST00000435201 GOSR1O95249 250 aa13.18□□□□□ -0.3
LIMK1-203ENST00000435201 AMY1AP04745 511 aa13.18□□□□□ -0.3
LIMK1-203ENST00000435201 BRS3P32247 399 aa13.18□□□□□ -0.3
LIMK1-203ENST00000435201 TCL1AP56279 114 aa13.18□□□□□ -0.3
LIMK1-203ENST00000435201 NDPQ00604 133 aa13.18□□□□□ -0.3
LIMK1-203ENST00000435201 KLF17Q5JT82 389 aaPredicted RBP13.18□□□□□ -0.3
LIMK1-203ENST00000435201 CDPF1Q6NVV7 123 aa13.18□□□□□ -0.3
LIMK1-203ENST00000435201 BPIFA4PQ86YQ2 179 aa13.18□□□□□ -0.3
LIMK1-203ENST00000435201 ZNF491Q8N8L2 437 aa13.18□□□□□ -0.3
LIMK1-203ENST00000435201 NUDT10Q8NFP7 164 aa13.18□□□□□ -0.3
LIMK1-203ENST00000435201 NUDT11Q96G61 164 aa13.18□□□□□ -0.3
LIMK1-203ENST00000435201 C7orf69Q9H7B7 122 aa13.18□□□□□ -0.3
LIMK1-203ENST00000435201 ZNF586Q9NXT0 402 aa13.18□□□□□ -0.3
LIMK1-203ENST00000435201 RPH3ALQ9UNE2 315 aa13.18□□□□□ -0.3
LIMK1-203ENST00000435201 TACC2O95359 2948 aa13.17□□□□□ -0.3
LIMK1-203ENST00000435201 WI2-2373I1.2A0A1W2PRP0 233 aa13.17□□□□□ -0.3
LIMK1-203ENST00000435201 CRISP2P16562 243 aa13.17□□□□□ -0.3
LIMK1-203ENST00000435201 RASL11AQ6T310 242 aa13.17□□□□□ -0.3
LIMK1-203ENST00000435201 SCGB2A1O75556 95 aa13.16□□□□□ -0.3
LIMK1-203ENST00000435201 LTAP01374 205 aa13.16□□□□□ -0.3
LIMK1-203ENST00000435201 HLA-DRB1P01911 266 aa13.16□□□□□ -0.3
LIMK1-203ENST00000435201 IL4P05112 153 aa13.16□□□□□ -0.3
LIMK1-203ENST00000435201 USF2Q15853 346 aaPredicted RBP13.16□□□□□ -0.3
LIMK1-203ENST00000435201 TMEM136Q6ZRR5 245 aa13.16□□□□□ -0.3
LIMK1-203ENST00000435201 OR4F17Q8NGA8 305 aa13.16□□□□□ -0.3
LIMK1-203ENST00000435201 MLST8Q9BVC4 326 aa13.16□□□□□ -0.3
LIMK1-203ENST00000435201 NAT8BQ9UHF3 227 aa13.16□□□□□ -0.3
LIMK1-203ENST00000435201 H3BTX0 84 aa13.16□□□□□ -0.3
LIMK1-203ENST00000435201 HLA-DQA1P01909 254 aa13.16□□□□□ -0.3
LIMK1-203ENST00000435201 CTAG1AP78358 180 aa13.16□□□□□ -0.3
LIMK1-203ENST00000435201 PRR27Q6MZM9 219 aa13.16□□□□□ -0.3
LIMK1-203ENST00000435201 Q8N9W7 124 aa13.16□□□□□ -0.3
LIMK1-203ENST00000435201 CMTM2Q8TAZ6 248 aa13.16□□□□□ -0.3
LIMK1-203ENST00000435201 PRDM13Q9H4Q3 707 aa13.16□□□□□ -0.3
LIMK1-203ENST00000435201 C21orf62Q9NYP8 219 aa13.16□□□□□ -0.3
LIMK1-203ENST00000435201 IGHV7-81A0A0B4J1V7 117 aa13.15□□□□□ -0.3
LIMK1-203ENST00000435201 GRIFINA4D1Z8 144 aa13.15□□□□□ -0.3
LIMK1-203ENST00000435201 SPINK4O60575 86 aa13.15□□□□□ -0.3
LIMK1-203ENST00000435201 CA1P00915 261 aaPredicted RBP13.15□□□□□ -0.3
LIMK1-203ENST00000435201 FRMD6-AS1P0C7T7 363 aa13.15□□□□□ -0.3
LIMK1-203ENST00000435201 Q0VG73 95 aa13.15□□□□□ -0.3
LIMK1-203ENST00000435201 Q56UQ5 140 aa13.15□□□□□ -0.3
LIMK1-203ENST00000435201 TMEM256Q8N2U0 113 aa13.15□□□□□ -0.3
LIMK1-203ENST00000435201 WIPF2Q8TF74 440 aaPredicted RBP13.15□□□□□ -0.3
LIMK1-203ENST00000435201 AJUBAQ96IF1 538 aa13.15□□□□□ -0.3
LIMK1-203ENST00000435201 ZNF492Q9P255 531 aa13.15□□□□□ -0.3
LIMK1-203ENST00000435201 TRBV19A0A075B6N1 114 aa13.14□□□□□ -0.31
LIMK1-203ENST00000435201 IGHV4-39P01824 125 aa13.14□□□□□ -0.31
LIMK1-203ENST00000435201 IGLC2P0DOY2 106 aa13.14□□□□□ -0.31
LIMK1-203ENST00000435201 GZMBP10144 247 aa13.14□□□□□ -0.31
LIMK1-203ENST00000435201 ESDP10768 282 aa13.14□□□□□ -0.31
LIMK1-203ENST00000435201 SAA4P35542 130 aa13.14□□□□□ -0.31
LIMK1-203ENST00000435201 MRPL54Q6P161 138 aaKnown RBP13.14□□□□□ -0.31
LIMK1-203ENST00000435201 LYPD1Q8N2G4 141 aa13.14□□□□□ -0.31
LIMK1-203ENST00000435201 TSKUQ8WUA8 353 aa13.14□□□□□ -0.31
LIMK1-203ENST00000435201 FAM168AQ92567 244 aa13.14□□□□□ -0.31
LIMK1-203ENST00000435201 ZNF331Q9NQX6 463 aaPredicted RBP13.14□□□□□ -0.31
LIMK1-203ENST00000435201 POLR3KQ9Y2Y1 108 aaPredicted RBP13.14□□□□□ -0.31
LIMK1-203ENST00000435201 TRBV6-1A0A0K0K1D8 114 aa13.14□□□□□ -0.31
LIMK1-203ENST00000435201 SLC35B1P78383 322 aa13.14□□□□□ -0.31
LIMK1-203ENST00000435201 A0A1B0GUS0 222 aa13.13□□□□□ -0.31
LIMK1-203ENST00000435201 F8W735 103 aaPredicted RBP13.13□□□□□ -0.31
LIMK1-203ENST00000435201 EGR2P11161 476 aaPredicted RBP13.13□□□□□ -0.31
LIMK1-203ENST00000435201 RAB4BP61018 213 aa13.13□□□□□ -0.31
LIMK1-203ENST00000435201 CT83Q5H943 113 aa13.13□□□□□ -0.31
LIMK1-203ENST00000435201 FAM120AOSQ5T036 256 aa13.13□□□□□ -0.31
LIMK1-203ENST00000435201 Q86TA4 180 aa13.13□□□□□ -0.31
LIMK1-203ENST00000435201 SGK494Q96LW2 274 aa13.13□□□□□ -0.31
LIMK1-203ENST00000435201 TXN2Q99757 166 aa13.13□□□□□ -0.31
LIMK1-203ENST00000435201 TP53TG3Q9ULZ0 132 aa13.13□□□□□ -0.31
LIMK1-203ENST00000435201 CACNA1AO00555 2505 aa13.13□□□□□ -0.31
LIMK1-203ENST00000435201 NPFFO15130 113 aa13.12□□□□□ -0.31
LIMK1-203ENST00000435201 NDUFB8O95169 186 aa13.12□□□□□ -0.31
LIMK1-203ENST00000435201 FCGR2BP31994 310 aaPredicted RBP13.12□□□□□ -0.31
LIMK1-203ENST00000435201 PAFAH1B2P68402 229 aa13.12□□□□□ -0.31
LIMK1-203ENST00000435201 NUP35Q8NFH5 326 aa13.12□□□□□ -0.31
LIMK1-203ENST00000435201 RPP21Q9H633 154 aaKnown RBP13.12□□□□□ -0.31
LIMK1-203ENST00000435201 S4R3C0 116 aa13.12□□□□□ -0.31
LIMK1-203ENST00000435201 PKD1L2Q7Z442 2459 aa13.12□□□□□ -0.31
LIMK1-203ENST00000435201 ABCA1O95477 2261 aa13.12□□□□□ -0.31
LIMK1-203ENST00000435201 MRPS12O15235 138 aaKnown RBP13.12□□□□□ -0.31
LIMK1-203ENST00000435201 OR2J3O76001 311 aa13.12□□□□□ -0.31
LIMK1-203ENST00000435201 TPPP2P59282 170 aa13.12□□□□□ -0.31
LIMK1-203ENST00000435201 OR10J3Q5JRS4 329 aa13.12□□□□□ -0.31
LIMK1-203ENST00000435201 BAGE3Q86Y29 109 aa13.12□□□□□ -0.31
LIMK1-203ENST00000435201 EXOC3-AS1Q8N2X6 119 aa13.12□□□□□ -0.31
LIMK1-203ENST00000435201 FAM110DQ8TAY7 271 aaPredicted RBP13.12□□□□□ -0.31
LIMK1-203ENST00000435201 PIMREGQ9BSJ6 248 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms