RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 C22orf46C9J442 243 aa10.04□□□□□ -0.8
CDH3-202ENST00000429102 TIMM23BQ5SRD1 257 aa10.04□□□□□ -0.8
CDH3-202ENST00000429102 TRBV9A0A0B4J1U6 114 aa10.04□□□□□ -0.8
CDH3-202ENST00000429102 LHBP01229 141 aa10.04□□□□□ -0.8
CDH3-202ENST00000429102 SUB1P53999 127 aaKnown RBP eCLIP10.04□□□□□ -0.8
CDH3-202ENST00000429102 TMEM249Q2WGJ8 235 aa10.04□□□□□ -0.8
CDH3-202ENST00000429102 OR4C13Q8NGP0 309 aa10.04□□□□□ -0.8
CDH3-202ENST00000429102 NDUFA4L2Q9NRX3 87 aa10.04□□□□□ -0.8
CDH3-202ENST00000429102 CUBNO60494 3623 aa10.04□□□□□ -0.8
CDH3-202ENST00000429102 M0R3E3 92 aa10.03□□□□□ -0.8
CDH3-202ENST00000429102 BSPH1Q075Z2 132 aa10.03□□□□□ -0.8
CDH3-202ENST00000429102 TEX45Q8NA69 505 aa10.03□□□□□ -0.8
CDH3-202ENST00000429102 C22orf15Q8WYQ4 148 aa10.03□□□□□ -0.8
CDH3-202ENST00000429102 FXYD5Q96DB9 178 aa10.03□□□□□ -0.8
CDH3-202ENST00000429102 GAL3ST2Q9H3Q3 398 aa10.03□□□□□ -0.8
CDH3-202ENST00000429102 HILPDAQ9Y5L2 63 aa10.03□□□□□ -0.8
CDH3-202ENST00000429102 PPIAL4EA0A075B759 164 aa10.03□□□□□ -0.8
CDH3-202ENST00000429102 OR2T8A6NH00 312 aa10.03□□□□□ -0.8
CDH3-202ENST00000429102 PPIAL4DF5H284 164 aa10.03□□□□□ -0.8
CDH3-202ENST00000429102 PPIAL4FP0DN26 164 aa10.03□□□□□ -0.8
CDH3-202ENST00000429102 GRAMD2BQ96HH9 432 aa10.03□□□□□ -0.8
CDH3-202ENST00000429102 Q9H3A6 140 aa10.03□□□□□ -0.8
CDH3-202ENST00000429102 TCRBV4S1A1TA0A5B7 111 aa10.03□□□□□ -0.8
CDH3-202ENST00000429102 COTL1Q14019 142 aa10.03□□□□□ -0.8
CDH3-202ENST00000429102 HES1Q14469 280 aa10.03□□□□□ -0.8
CDH3-202ENST00000429102 FBLN7Q53RD9 439 aa10.03□□□□□ -0.8
CDH3-202ENST00000429102 C1orf162Q8NEQ5 155 aaPredicted RBP10.03□□□□□ -0.8
CDH3-202ENST00000429102 GTSF1Q8WW33 167 aa10.03□□□□□ -0.8
CDH3-202ENST00000429102 RAB9BQ9NP90 201 aa10.03□□□□□ -0.8
CDH3-202ENST00000429102 CUL9Q8IWT3 2517 aa10.03□□□□□ -0.8
CDH3-202ENST00000429102 CHD8Q9HCK8 2581 aa10.02□□□□□ -0.8
CDH3-202ENST00000429102 PSG1P11464 419 aa10.02□□□□□ -0.8
CDH3-202ENST00000429102 CTRLP40313 264 aa10.02□□□□□ -0.8
CDH3-202ENST00000429102 AMMECR1LQ6DCA0 310 aa10.02□□□□□ -0.8
CDH3-202ENST00000429102 TMEM70Q9BUB7 260 aa10.02□□□□□ -0.8
CDH3-202ENST00000429102 TRAV9-2A0A087WT02 112 aa10.02□□□□□ -0.81
CDH3-202ENST00000429102 C19orf67A6NJJ6 358 aa10.02□□□□□ -0.81
CDH3-202ENST00000429102 PRSS3P2Q8NHM4 247 aa10.02□□□□□ -0.81
CDH3-202ENST00000429102 F11RQ9Y624 299 aaKnown RBP10.02□□□□□ -0.81
CDH3-202ENST00000429102 ZNF292O60281 2723 aa10.02□□□□□ -0.81
CDH3-202ENST00000429102 PTPRBP23467 1997 aa10.02□□□□□ -0.81
CDH3-202ENST00000429102 ZNF883P0CG24 379 aa10.02□□□□□ -0.81
CDH3-202ENST00000429102 RIPPLY3P57055 190 aa10.02□□□□□ -0.81
CDH3-202ENST00000429102 HBBP68871 147 aa10.02□□□□□ -0.81
CDH3-202ENST00000429102 GUSBP1Q15486 140 aa10.02□□□□□ -0.81
CDH3-202ENST00000429102 VMA21Q3ZAQ7 101 aa10.02□□□□□ -0.81
CDH3-202ENST00000429102 TMUB1Q9BVT8 246 aa10.02□□□□□ -0.81
CDH3-202ENST00000429102 CGB1A6NKQ9 187 aa10.01□□□□□ -0.81
CDH3-202ENST00000429102 LRRC10Q5BKY1 277 aa10.01□□□□□ -0.81
CDH3-202ENST00000429102 INSIG2Q9Y5U4 225 aa10.01□□□□□ -0.81
CDH3-202ENST00000429102 DSCAML1Q8TD84 2053 aa10.01□□□□□ -0.81
CDH3-202ENST00000429102 IGKV1D-37A0A075B6S9 117 aa10.01□□□□□ -0.81
CDH3-202ENST00000429102 TRAV9-1A0A075B6T8 112 aa10.01□□□□□ -0.81
CDH3-202ENST00000429102 IGHV3OR16-13A0A075B7E8 117 aa10.01□□□□□ -0.81
CDH3-202ENST00000429102 IGHV3-74A0A0B4J1X5 117 aa10.01□□□□□ -0.81
CDH3-202ENST00000429102 FCN3O75636 299 aa10.01□□□□□ -0.81
CDH3-202ENST00000429102 OR5AL1P0C617 328 aa10.01□□□□□ -0.81
CDH3-202ENST00000429102 TNFRSF1AP19438 455 aa10.01□□□□□ -0.81
CDH3-202ENST00000429102 RPL27AP46776 148 aaKnown RBP10.01□□□□□ -0.81
CDH3-202ENST00000429102 NHLH1Q02575 133 aa10.01□□□□□ -0.81
CDH3-202ENST00000429102 AARDQ4LEZ3 155 aa10.01□□□□□ -0.81
CDH3-202ENST00000429102 TMEM108Q6UXF1 575 aa10.01□□□□□ -0.81
CDH3-202ENST00000429102 OSR1Q8TAX0 266 aaPredicted RBP10.01□□□□□ -0.81
CDH3-202ENST00000429102 PERPQ96FX8 193 aa10.01□□□□□ -0.81
CDH3-202ENST00000429102 GPR82Q96P67 336 aa10.01□□□□□ -0.81
CDH3-202ENST00000429102 RPP21Q9H633 154 aaKnown RBP10.01□□□□□ -0.81
CDH3-202ENST00000429102 ESDP10768 282 aa10□□□□□ -0.81
CDH3-202ENST00000429102 FOXE3Q13461 319 aa10□□□□□ -0.81
CDH3-202ENST00000429102 LY96Q9Y6Y9 160 aa10□□□□□ -0.81
CDH3-202ENST00000429102 A8MWL6 223 aa10□□□□□ -0.81
CDH3-202ENST00000429102 CTSZQ9UBR2 303 aa10□□□□□ -0.81
CDH3-202ENST00000429102 LINC00312Q9Y6C7 94 aa10□□□□□ -0.81
CDH3-202ENST00000429102 CELSR1Q9NYQ6 3014 aa10□□□□□ -0.81
CDH3-202ENST00000429102 IGHV1-24A0A0C4DH33 117 aa10□□□□□ -0.81
CDH3-202ENST00000429102 ADIPOQQ15848 244 aa10□□□□□ -0.81
CDH3-202ENST00000429102 BCL6BQ8N143 479 aaPredicted RBP10□□□□□ -0.81
CDH3-202ENST00000429102 C17orf100A8MU93 164 aa9.99□□□□□ -0.81
CDH3-202ENST00000429102 ARMS2P0C7Q2 107 aa9.99□□□□□ -0.81
CDH3-202ENST00000429102 LINC00614P0C842 121 aa9.99□□□□□ -0.81
CDH3-202ENST00000429102 FAM106CPP0CH98 169 aa9.99□□□□□ -0.81
CDH3-202ENST00000429102 FCGR2BP31994 310 aaPredicted RBP9.99□□□□□ -0.81
CDH3-202ENST00000429102 FAM106AQ4KMX7 169 aa9.99□□□□□ -0.81
CDH3-202ENST00000429102 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.99□□□□□ -0.81
CDH3-202ENST00000429102 MBD6Q96DN6 1003 aa9.99□□□□□ -0.81
CDH3-202ENST00000429102 CHRDL1Q9BU40 450 aa9.99□□□□□ -0.81
CDH3-202ENST00000429102 PRO3102Q9H379 93 aa9.99□□□□□ -0.81
CDH3-202ENST00000429102 C1orf185Q5T7R7 199 aa9.99□□□□□ -0.81
CDH3-202ENST00000429102 URB1-AS1Q96HZ7 61 aa9.99□□□□□ -0.81
CDH3-202ENST00000429102 MRPL32Q9BYC8 188 aaKnown RBP9.99□□□□□ -0.81
CDH3-202ENST00000429102 SMKR1H3BMG3 65 aa9.99□□□□□ -0.81
CDH3-202ENST00000429102 APOHP02749 345 aaPredicted RBP9.99□□□□□ -0.81
CDH3-202ENST00000429102 NMUP48645 174 aa9.99□□□□□ -0.81
CDH3-202ENST00000429102 PRSS33Q8NF86 280 aa9.99□□□□□ -0.81
CDH3-202ENST00000429102 C18orf15Q96N68 181 aa9.99□□□□□ -0.81
CDH3-202ENST00000429102 ONECUT1Q9UBC0 465 aa9.99□□□□□ -0.81
CDH3-202ENST00000429102 C2orf70A6NJV1 201 aa9.98□□□□□ -0.81
CDH3-202ENST00000429102 CFHR2P36980 270 aa9.98□□□□□ -0.81
CDH3-202ENST00000429102 SLC25A34Q6PIV7 304 aa9.98□□□□□ -0.81
CDH3-202ENST00000429102 FA2HQ7L5A8 372 aa9.98□□□□□ -0.81
CDH3-202ENST00000429102 CACNG8Q8WXS5 425 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms