RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 RBMY1FQ15415 496 aaKnown RBP7.36□□□□□ -1.23
CTNND1-208ENST00000428599 CHCHD1Q96BP2 118 aaKnown RBP7.36□□□□□ -1.23
CTNND1-208ENST00000428599 PLSCR4Q9NRQ2 329 aa7.36□□□□□ -1.23
CTNND1-208ENST00000428599 TICRRQ7Z2Z1 1910 aa7.36□□□□□ -1.23
CTNND1-208ENST00000428599 PI4KAP42356 2102 aa7.36□□□□□ -1.23
CTNND1-208ENST00000428599 FCN3O75636 299 aa7.36□□□□□ -1.23
CTNND1-208ENST00000428599 LAIR2Q6ISS4 152 aa7.36□□□□□ -1.23
CTNND1-208ENST00000428599 VCYO14598 125 aa7.36□□□□□ -1.23
CTNND1-208ENST00000428599 GATA3P23771 443 aa7.36□□□□□ -1.23
CTNND1-208ENST00000428599 DUTP33316 252 aaKnown RBP7.36□□□□□ -1.23
CTNND1-208ENST00000428599 ZNF138P52744 262 aa7.36□□□□□ -1.23
CTNND1-208ENST00000428599 GAGE2EQ4V326 116 aa7.36□□□□□ -1.23
CTNND1-208ENST00000428599 GTF3AQ92664 365 aaKnown RBP7.36□□□□□ -1.23
CTNND1-208ENST00000428599 C18orf12Q96KH6 178 aa7.36□□□□□ -1.23
CTNND1-208ENST00000428599 GAGE2DQ9UEU5 116 aa7.36□□□□□ -1.23
CTNND1-208ENST00000428599 ACACAQ13085 2346 aa7.36□□□□□ -1.23
CTNND1-208ENST00000428599 F5H768 121 aa7.36□□□□□ -1.23
CTNND1-208ENST00000428599 TMEM178BH3BS89 294 aa7.36□□□□□ -1.23
CTNND1-208ENST00000428599 Q0VFX4 171 aa7.36□□□□□ -1.23
CTNND1-208ENST00000428599 TMEM200BQ69YZ2 307 aa7.36□□□□□ -1.23
CTNND1-208ENST00000428599 NKAPP1Q8N9T2 125 aa7.36□□□□□ -1.23
CTNND1-208ENST00000428599 OR10W1Q8NGF6 305 aa7.36□□□□□ -1.23
CTNND1-208ENST00000428599 LSM4Q9Y4Z0 139 aaKnown RBP7.36□□□□□ -1.23
CTNND1-208ENST00000428599 A0A087WWC5 75 aa7.36□□□□□ -1.23
CTNND1-208ENST00000428599 WDR81Q562E7 1941 aa7.35□□□□□ -1.23
CTNND1-208ENST00000428599 RAMP3O60896 148 aa7.35□□□□□ -1.23
CTNND1-208ENST00000428599 AMBPP02760 352 aa7.35□□□□□ -1.23
CTNND1-208ENST00000428599 GATA4P43694 442 aa7.35□□□□□ -1.23
CTNND1-208ENST00000428599 TSKUQ8WUA8 353 aa7.35□□□□□ -1.23
CTNND1-208ENST00000428599 ZMAT4Q9H898 229 aa7.35□□□□□ -1.23
CTNND1-208ENST00000428599 A0A1B0GWJ7 208 aa7.35□□□□□ -1.23
CTNND1-208ENST00000428599 MYMXA0A1B0GTQ4 84 aa7.35□□□□□ -1.23
CTNND1-208ENST00000428599 APOC4P55056 127 aa7.35□□□□□ -1.23
CTNND1-208ENST00000428599 FOXF2Q12947 444 aa7.35□□□□□ -1.23
CTNND1-208ENST00000428599 IFI27L1Q96BM0 104 aa7.35□□□□□ -1.23
CTNND1-208ENST00000428599 SNHG12Q9BXW3 62 aa7.35□□□□□ -1.23
CTNND1-208ENST00000428599 RPUSD1Q9UJJ7 312 aaKnown RBP7.35□□□□□ -1.23
CTNND1-208ENST00000428599 TANC1Q9C0D5 1861 aa7.35□□□□□ -1.23
CTNND1-208ENST00000428599 MPTX1A8MV57 137 aa7.35□□□□□ -1.23
CTNND1-208ENST00000428599 TFF1P04155 84 aa7.35□□□□□ -1.23
CTNND1-208ENST00000428599 FAM90A2PQ658T7 463 aa7.35□□□□□ -1.23
CTNND1-208ENST00000428599 LURAP1LQ8IV03 231 aa7.35□□□□□ -1.23
CTNND1-208ENST00000428599 ZNF48Q96MX3 618 aaPredicted RBP7.35□□□□□ -1.23
CTNND1-208ENST00000428599 DOCK8Q8NF50 2099 aa7.35□□□□□ -1.23
CTNND1-208ENST00000428599 RPL23P62829 140 aaKnown RBP7.35□□□□□ -1.23
CTNND1-208ENST00000428599 NHLRC3Q5JS37 347 aa7.35□□□□□ -1.23
CTNND1-208ENST00000428599 HEPN1Q6WQI6 88 aa7.35□□□□□ -1.23
CTNND1-208ENST00000428599 SRSF4Q08170 494 aaKnown RBP7.34□□□□□ -1.23
CTNND1-208ENST00000428599 ZNF474Q6S9Z5 364 aaPredicted RBP7.34□□□□□ -1.23
CTNND1-208ENST00000428599 RNF223E7ERA6 249 aa7.34□□□□□ -1.23
CTNND1-208ENST00000428599 NDPQ00604 133 aa7.34□□□□□ -1.23
CTNND1-208ENST00000428599 EFNB3Q15768 340 aa7.34□□□□□ -1.23
CTNND1-208ENST00000428599 ANAPC13Q9BS18 74 aa7.34□□□□□ -1.23
CTNND1-208ENST00000428599 SLC25A39Q9BZJ4 359 aaPredicted RBP7.34□□□□□ -1.23
CTNND1-208ENST00000428599 TRAV13-1A0A0B4J241 112 aa7.34□□□□□ -1.23
CTNND1-208ENST00000428599 J3QKU1 62 aa7.34□□□□□ -1.23
CTNND1-208ENST00000428599 SERF1AO75920 110 aa7.34□□□□□ -1.23
CTNND1-208ENST00000428599 ADMP35318 185 aa7.34□□□□□ -1.23
CTNND1-208ENST00000428599 C5orf64Q2M2E5 130 aa7.34□□□□□ -1.23
CTNND1-208ENST00000428599 RTTNQ86VV8 2226 aa7.34□□□□□ -1.23
CTNND1-208ENST00000428599 PMS2P5A8MQ11 134 aa7.34□□□□□ -1.23
CTNND1-208ENST00000428599 LINC01619G3V211 115 aa7.34□□□□□ -1.23
CTNND1-208ENST00000428599 SUMO4Q6EEV6 95 aa7.34□□□□□ -1.23
CTNND1-208ENST00000428599 LYPD3O95274 346 aa7.33□□□□□ -1.24
CTNND1-208ENST00000428599 IFITM3Q01628 133 aa7.33□□□□□ -1.24
CTNND1-208ENST00000428599 SLC25A48Q6ZT89 311 aaKnown RBP7.33□□□□□ -1.24
CTNND1-208ENST00000428599 ZNF329Q86UD4 541 aa7.33□□□□□ -1.24
CTNND1-208ENST00000428599 RHPN1-AS1Q9BWJ2 59 aa7.33□□□□□ -1.24
CTNND1-208ENST00000428599 A0A1B0GTI1 187 aa7.33□□□□□ -1.24
CTNND1-208ENST00000428599 GGNQ86UU5 652 aa7.33□□□□□ -1.24
CTNND1-208ENST00000428599 DAZ1Q9NQZ3 744 aaKnown RBP7.33□□□□□ -1.24
CTNND1-208ENST00000428599 IGKV1D-13A0A0B4J2D9 117 aa7.33□□□□□ -1.24
CTNND1-208ENST00000428599 SRRM5B3KS81 715 aa7.33□□□□□ -1.24
CTNND1-208ENST00000428599 IGKV1-13P0DP09 117 aa7.33□□□□□ -1.24
CTNND1-208ENST00000428599 FOXL1Q12952 345 aa7.33□□□□□ -1.24
CTNND1-208ENST00000428599 TMEM249Q2WGJ8 235 aa7.33□□□□□ -1.24
CTNND1-208ENST00000428599 ZNF479Q96JC4 524 aa7.33□□□□□ -1.24
CTNND1-208ENST00000428599 MSRB2Q9Y3D2 182 aa7.33□□□□□ -1.24
CTNND1-208ENST00000428599 MDC1Q14676 2089 aaKnown RBP7.33□□□□□ -1.24
CTNND1-208ENST00000428599 A0A0G2JNJ9 132 aa7.33□□□□□ -1.24
CTNND1-208ENST00000428599 FAM110DQ8TAY7 271 aaPredicted RBP7.33□□□□□ -1.24
CTNND1-208ENST00000428599 TRGV9Q99603 122 aa7.33□□□□□ -1.24
CTNND1-208ENST00000428599 GNB1LQ9BYB4 327 aa7.33□□□□□ -1.24
CTNND1-208ENST00000428599 Q9UFV3 132 aa7.33□□□□□ -1.24
CTNND1-208ENST00000428599 EFNA2O43921 213 aa7.33□□□□□ -1.24
CTNND1-208ENST00000428599 FNDC4Q9H6D8 234 aaPredicted RBP7.33□□□□□ -1.24
CTNND1-208ENST00000428599 HEATR5BQ9P2D3 2071 aa7.32□□□□□ -1.24
CTNND1-208ENST00000428599 DMRTA1Q5VZB9 504 aa7.32□□□□□ -1.24
CTNND1-208ENST00000428599 MGST2Q99735 147 aa7.32□□□□□ -1.24
CTNND1-208ENST00000428599 NEUROG3Q9Y4Z2 214 aa7.32□□□□□ -1.24
CTNND1-208ENST00000428599 ZNF318Q5VUA4 2279 aa7.32□□□□□ -1.24
CTNND1-208ENST00000428599 BUB1B-PAK6H3BSN5 160 aa7.32□□□□□ -1.24
CTNND1-208ENST00000428599 C1QTNF9P0C862 333 aa7.32□□□□□ -1.24
CTNND1-208ENST00000428599 HSD52Q0P140 79 aa7.32□□□□□ -1.24
CTNND1-208ENST00000428599 CLPSP04118 112 aa7.32□□□□□ -1.24
CTNND1-208ENST00000428599 SYNJ2BPP57105 145 aa7.32□□□□□ -1.24
CTNND1-208ENST00000428599 TMEM155Q4W5P6 130 aa7.32□□□□□ -1.24
CTNND1-208ENST00000428599 PRIMA1Q86XR5 153 aa7.32□□□□□ -1.24
CTNND1-208ENST00000428599 Q96MF0 132 aa7.32□□□□□ -1.24
CTNND1-208ENST00000428599 CSTL1Q9H114 145 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms