RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 BEX4Q9NWD9 120 aaPredicted RBP5.57□□□□□ -1.52
CNOT4-205ENST00000423368 DLL3Q9NYJ7 618 aa5.57□□□□□ -1.52
CNOT4-205ENST00000423368 TCF19Q9Y242 345 aa5.57□□□□□ -1.52
CNOT4-205ENST00000423368 CENPVL3A0A0U1RRI6 287 aa5.56□□□□□ -1.52
CNOT4-205ENST00000423368 SMKR1H3BMG3 65 aa5.56□□□□□ -1.52
CNOT4-205ENST00000423368 M0R135 149 aa5.56□□□□□ -1.52
CNOT4-205ENST00000423368 MYOD1P15172 320 aa5.56□□□□□ -1.52
CNOT4-205ENST00000423368 TNFRSF1AP19438 455 aa5.56□□□□□ -1.52
CNOT4-205ENST00000423368 OR1L4Q8NGR5 311 aa5.56□□□□□ -1.52
CNOT4-205ENST00000423368 PPDPFLQ8WWR9 84 aa5.56□□□□□ -1.52
CNOT4-205ENST00000423368 FLYWCH2Q96CP2 140 aaKnown RBP5.56□□□□□ -1.52
CNOT4-205ENST00000423368 ZNF799Q96GE5 643 aa5.56□□□□□ -1.52
CNOT4-205ENST00000423368 MGST2Q99735 147 aa5.56□□□□□ -1.52
CNOT4-205ENST00000423368 A0A0U1RQV1 116 aa5.56□□□□□ -1.52
CNOT4-205ENST00000423368 IL4P05112 153 aa5.56□□□□□ -1.52
CNOT4-205ENST00000423368 COL8A1P27658 744 aa5.56□□□□□ -1.52
CNOT4-205ENST00000423368 P2RY2P41231 377 aa5.56□□□□□ -1.52
CNOT4-205ENST00000423368 TMEM211Q6ICI0 200 aa5.56□□□□□ -1.52
CNOT4-205ENST00000423368 TREML4Q6UXN2 200 aa5.56□□□□□ -1.52
CNOT4-205ENST00000423368 CEND1Q8N111 149 aa5.56□□□□□ -1.52
CNOT4-205ENST00000423368 PHLDA1Q8WV24 401 aaPredicted RBP5.56□□□□□ -1.52
CNOT4-205ENST00000423368 ABHD14BQ96IU4 210 aa5.56□□□□□ -1.52
CNOT4-205ENST00000423368 LYRM4Q9HD34 91 aa5.56□□□□□ -1.52
CNOT4-205ENST00000423368 PILRAQ9UKJ1 303 aa5.56□□□□□ -1.52
CNOT4-205ENST00000423368 TIMM9Q9Y5J7 89 aa5.56□□□□□ -1.52
CNOT4-205ENST00000423368 SORL1Q92673 2214 aa5.56□□□□□ -1.52
CNOT4-205ENST00000423368 CDX4O14627 284 aaPredicted RBP5.56□□□□□ -1.52
CNOT4-205ENST00000423368 PYYP10082 97 aa5.56□□□□□ -1.52
CNOT4-205ENST00000423368 HERVK_113P63121 156 aa5.56□□□□□ -1.52
CNOT4-205ENST00000423368 HOXA4Q00056 320 aaPredicted RBP5.56□□□□□ -1.52
CNOT4-205ENST00000423368 Q71RC1 249 aaPredicted RBP5.56□□□□□ -1.52
CNOT4-205ENST00000423368 SPTBN2O15020 2390 aa5.56□□□□□ -1.52
CNOT4-205ENST00000423368 NAV3Q8IVL0 2385 aa5.55□□□□□ -1.52
CNOT4-205ENST00000423368 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.55□□□□□ -1.522e-7■■□□□ 11.4
CNOT4-205ENST00000423368 PKDREJQ9NTG1 2253 aa5.55□□□□□ -1.52
CNOT4-205ENST00000423368 IGHV3-43A0A0B4J1X8 118 aa5.55□□□□□ -1.52
CNOT4-205ENST00000423368 IGLV2-8P01709 118 aa5.55□□□□□ -1.52
CNOT4-205ENST00000423368 IGHV3-43DP0DP04 118 aa5.55□□□□□ -1.52
CNOT4-205ENST00000423368 RPL35AP18077 110 aaKnown RBP5.55□□□□□ -1.52
CNOT4-205ENST00000423368 ZNF56Q15929 161 aa5.55□□□□□ -1.52
CNOT4-205ENST00000423368 RRN3P1Q2M238 152 aa5.55□□□□□ -1.52
CNOT4-205ENST00000423368 FAM214BQ7L5A3 538 aa5.55□□□□□ -1.52
CNOT4-205ENST00000423368 CRIPAKQ8N1N5 446 aa5.55□□□□□ -1.52
CNOT4-205ENST00000423368 TMEM101Q96IK0 257 aa5.55□□□□□ -1.52
CNOT4-205ENST00000423368 TNS1Q9HBL0 1735 aaKnown RBP5.55□□□□□ -1.52
CNOT4-205ENST00000423368 MED13LQ71F56 2210 aa5.55□□□□□ -1.52
CNOT4-205ENST00000423368 TMEM150CB9EJG8 249 aa5.55□□□□□ -1.52
CNOT4-205ENST00000423368 TNRC18O15417 2968 aaPredicted RBP5.55□□□□□ -1.52
CNOT4-205ENST00000423368 CD3EP07766 207 aa5.55□□□□□ -1.52
CNOT4-205ENST00000423368 CFAP126Q5VTH2 177 aa5.55□□□□□ -1.52
CNOT4-205ENST00000423368 TMEM42Q69YG0 159 aa5.55□□□□□ -1.52
CNOT4-205ENST00000423368 MKXQ8IYA7 352 aa5.55□□□□□ -1.52
CNOT4-205ENST00000423368 RFESDQ8TAC1 157 aa5.55□□□□□ -1.52
CNOT4-205ENST00000423368 ZNF837Q96EG3 531 aaPredicted RBP5.55□□□□□ -1.52
CNOT4-205ENST00000423368 MMABQ96EY8 250 aaPredicted RBP5.55□□□□□ -1.52
CNOT4-205ENST00000423368 MDFIQ99750 246 aa5.55□□□□□ -1.52
CNOT4-205ENST00000423368 OR2H1Q9GZK4 316 aa5.55□□□□□ -1.52
CNOT4-205ENST00000423368 PRTFDC1Q9NRG1 225 aa5.55□□□□□ -1.52
CNOT4-205ENST00000423368 THADAQ6YHU6 1953 aa5.55□□□□□ -1.52
CNOT4-205ENST00000423368 TMEM8BA6NDV4 472 aa5.54□□□□□ -1.52
CNOT4-205ENST00000423368 C9JCJ5 164 aa5.54□□□□□ -1.52
CNOT4-205ENST00000423368 DLL1O00548 723 aa5.54□□□□□ -1.52
CNOT4-205ENST00000423368 SP1P08047 785 aa5.54□□□□□ -1.52
CNOT4-205ENST00000423368 HLA-DRB4P13762 266 aa5.54□□□□□ -1.52
CNOT4-205ENST00000423368 GATA4P43694 442 aa5.54□□□□□ -1.52
CNOT4-205ENST00000423368 ERVK11-1P61568 191 aa5.54□□□□□ -1.52
CNOT4-205ENST00000423368 KLF5Q13887 457 aaPredicted RBP5.54□□□□□ -1.52
CNOT4-205ENST00000423368 MLANAQ16655 118 aa5.54□□□□□ -1.52
CNOT4-205ENST00000423368 ZNF542PQ5EBM4 170 aa5.54□□□□□ -1.52
CNOT4-205ENST00000423368 HLA-DQA1Q5Y7H0 255 aa5.54□□□□□ -1.52
CNOT4-205ENST00000423368 MAPKAPK5-AS1Q8N8E1 139 aa5.54□□□□□ -1.52
CNOT4-205ENST00000423368 OR4C13Q8NGP0 309 aa5.54□□□□□ -1.52
CNOT4-205ENST00000423368 KIR2DL5BQ8NHK3 375 aa5.54□□□□□ -1.52
CNOT4-205ENST00000423368 DEFB104AQ8WTQ1 72 aa5.54□□□□□ -1.52
CNOT4-205ENST00000423368 CDX2Q99626 313 aaPredicted RBP5.54□□□□□ -1.52
CNOT4-205ENST00000423368 PROCRQ9UNN8 238 aa5.54□□□□□ -1.52
CNOT4-205ENST00000423368 HLA-DRB4X5D2U9 266 aa5.54□□□□□ -1.52
CNOT4-205ENST00000423368 PCNX2A6NKB5 2137 aa5.54□□□□□ -1.52
CNOT4-205ENST00000423368 CSMD1Q96PZ7 3565 aa5.54□□□□□ -1.52
CNOT4-205ENST00000423368 C17orf98A8MV24 154 aa5.54□□□□□ -1.52
CNOT4-205ENST00000423368 A8MWV9 139 aa5.54□□□□□ -1.52
CNOT4-205ENST00000423368 TNFSF11O14788 317 aa5.54□□□□□ -1.52
CNOT4-205ENST00000423368 FOXS1O43638 330 aa5.54□□□□□ -1.52
CNOT4-205ENST00000423368 CD7P09564 240 aa5.54□□□□□ -1.52
CNOT4-205ENST00000423368 RPL30P62888 115 aaKnown RBP5.54□□□□□ -1.52
CNOT4-205ENST00000423368 SPATA46Q5T0L3 261 aa5.54□□□□□ -1.52
CNOT4-205ENST00000423368 LINC00322Q6ZN03 302 aaPredicted RBP5.54□□□□□ -1.52
CNOT4-205ENST00000423368 GATD1Q8NB37 220 aa5.54□□□□□ -1.52
CNOT4-205ENST00000423368 RASL10AQ92737 203 aa5.54□□□□□ -1.52
CNOT4-205ENST00000423368 CHCHD1Q96BP2 118 aaKnown RBP5.54□□□□□ -1.52
CNOT4-205ENST00000423368 PTPRSQ13332 1948 aa5.54□□□□□ -1.52
CNOT4-205ENST00000423368 TRAV41A0A0B4J266 112 aa5.54□□□□□ -1.52
CNOT4-205ENST00000423368 J3QLI3 93 aa5.54□□□□□ -1.52
CNOT4-205ENST00000423368 MPDU1O75352 247 aa5.54□□□□□ -1.52
CNOT4-205ENST00000423368 NDUFA3O95167 84 aa5.54□□□□□ -1.52
CNOT4-205ENST00000423368 MOSP00540 346 aa5.54□□□□□ -1.52
CNOT4-205ENST00000423368 IGHV3-9P01782 118 aa5.54□□□□□ -1.52
CNOT4-205ENST00000423368 CD40P25942 277 aa5.54□□□□□ -1.52
CNOT4-205ENST00000423368 UBE2L3P68036 154 aaKnown RBP5.54□□□□□ -1.52
CNOT4-205ENST00000423368 NSUN5P1Q3KNT7 163 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms